NO07G04350, NO07G04350 (gene) Nannochloropsis oceanica

Overview
NameNO07G04350
Unique NameNO07G04350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length811
Alignment locationchr7:1214761..1215571 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1214761..1215571 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 266.9 bits (681), Expect = 4.900e-68
Identity = 176/199 (88.44%), Postives = 177/199 (88.94%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQS+AAAEI  XXXXXXXXXXXXXXX  XXXXXXXXXXXXXX              REVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 199
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 261.9 bits (668), Expect = 1.600e-66
Identity = 147/199 (73.87%), Postives = 149/199 (74.87%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIA+                                             REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAR-------------------------VEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 174
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 244.2 bits (622), Expect = 3.400e-61
Identity = 181/199 (90.95%), Postives = 183/199 (91.96%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            +LA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  REVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 269
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 238.4 bits (607), Expect = 1.900e-59
Identity = 179/199 (89.95%), Postives = 180/199 (90.45%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            MLA LLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSST HTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  REVQLAYTQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 188
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 230.7 bits (587), Expect = 3.900e-57
Identity = 181/210 (86.19%), Postives = 183/210 (87.14%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------AAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ    TEIKYVQSKA                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 206
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 228.8 bits (582), Expect = 1.500e-56
Identity = 163/214 (76.17%), Postives = 166/214 (77.57%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI-------------------------AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY++SKAAAEI                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGG  G EEKEEEN
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGISGSEEKEEEN 287
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 228.4 bits (581), Expect = 2.000e-56
Identity = 154/188 (81.91%), Postives = 157/188 (83.51%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            H   GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEIAQ       XXXXXXXXXXXXXXXXXXXXXXXX              REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQ-------XXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 206
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 228.0 bits (580), Expect = 2.500e-56
Identity = 172/182 (94.51%), Postives = 173/182 (95.05%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAAAEIAQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 227.6 bits (579), Expect = 3.300e-56
Identity = 129/189 (68.25%), Postives = 132/189 (69.84%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIKY      AE+ +                                             REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKY------AEVER-------------------------------------------FKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 214
[Close]
BLAST of NO07G04350 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 226.1 bits (575), Expect = 9.700e-56
Identity = 160/193 (82.90%), Postives = 162/193 (83.94%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYV----QSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 200
            NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY+              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            REVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
The following BLAST results are available for this feature:
BLAST of NO07G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20009.14.900e-6888.44hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20057.11.600e-6673.87hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20066.13.400e-6190.95hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM19993.11.900e-5989.95hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20041.13.900e-5786.19hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20119.11.500e-5676.17hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20145.12.000e-5681.91hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20019.12.500e-5694.51hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20114.13.300e-5668.25hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20060.19.700e-5682.90hypothetical protein Naga_101993g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04350.1NO07G04350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04350.1NO07G04350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04350 ID=NO07G04350|Name=NO07G04350|organism=Nannochloropsis oceanica|type=gene|length=811bp
ATGCTTGCCTCGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgattccccctttgtctgcgtgtctgtgt
cgtttgcgttgtaatctttgttatgcggaaaaggcccgcatcaaggtgtt
cacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTGC
GGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGGA
GAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAAGGCATTGGCGCGGT
GCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAGA
CTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGAG
ATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGGC
GGAGATCGCGCAGGCGAAAGCGGACGTCGCGCGTGTGGAGGACAAGCGGA
CAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAG
GTCCAACTGGCTTACACTCAAGACTATGAGCCTTATCAGGCCGCGCTTGT
GGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAG
AGGAGAATTAG
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protein sequence of NO07G04350.1

>NO07G04350.1-protein ID=NO07G04350.1-protein|Name=NO07G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bp
MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKAAAEIAQAKADVARVEDKRTMSE
VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications