NO07G04340, NO07G04340 (gene) Nannochloropsis oceanica

Overview
NameNO07G04340
Unique NameNO07G04340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length844
Alignment locationchr7:1212956..1213799 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1212956..1213799 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 196.8 bits (499), Expect = 6.600e-47
Identity = 159/193 (82.38%), Postives = 161/193 (83.42%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDK 194
            MLALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE+                          A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEI---------------KYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana])

HSP 1 Score: 185.3 bits (469), Expect = 2.000e-43
Identity = 172/219 (78.54%), Postives = 176/219 (80.37%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEM-------------------ATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            NHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE+                        XXXXXXXXXXXXXXX      + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana])

HSP 1 Score: 161.0 bits (406), Expect = 4.000e-36
Identity = 143/176 (81.25%), Postives = 144/176 (81.82%), Query Frame = 0 
Query:   42 KGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIK-------XXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIK            XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   64 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana])

HSP 1 Score: 151.4 bits (381), Expect = 3.200e-33
Identity = 116/170 (68.24%), Postives = 119/170 (70.00%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            GKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTE+                          +        XXXXXXXXXXXXXXXXXXXXXXXX              REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:    7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEI----------------------KYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana])

HSP 1 Score: 146.7 bits (369), Expect = 7.900e-32
Identity = 139/170 (81.76%), Postives = 142/170 (83.53%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            GKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE+                       XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEI---------------KYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana])

HSP 1 Score: 144.4 bits (363), Expect = 3.900e-31
Identity = 148/170 (87.06%), Postives = 151/170 (88.82%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            GKGRVLRGGFSST HTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ    TEIK      XXXXXXXXXXXXXXX XXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana])

HSP 1 Score: 119.8 bits (299), Expect = 1.000e-23
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:   42 KGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIK 105
            KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEI+
Sbjct:   22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIR 84
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana])

HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23
Identity = 135/153 (88.24%), Postives = 139/153 (90.85%), Query Frame = 0 
Query:   61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE   + ++         XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana])

HSP 1 Score: 78.2 bits (191), Expect = 3.400e-11
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGK 43
            +LALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPG+
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana])

HSP 1 Score: 76.6 bits (187), Expect = 1.000e-10
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGK 43
            MLALLLAAIINHDHQGD M RRFTAKAGAMAR GSTLPGPG+
Sbjct:   77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118
The following BLAST results are available for this feature:
BLAST of NO07G04340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20019.16.600e-4782.38hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20166.12.000e-4378.54hypothetical protein Naga_101373g3 [Nannochloropsi... [more]
EWM20082.14.000e-3681.25hypothetical protein Naga_101888g1 [Nannochloropsi... [more]
EWM20146.13.200e-3368.24hypothetical protein Naga_101508g1 [Nannochloropsi... [more]
EWM19988.17.900e-3281.76hypothetical protein Naga_102432g1 [Nannochloropsi... [more]
EWM19937.13.900e-3187.06hypothetical protein Naga_102907g1 [Nannochloropsi... [more]
EWM22525.11.000e-2395.24hypothetical protein Naga_101794g1 [Nannochloropsi... [more]
EWM19982.16.700e-2388.24hypothetical protein Naga_102464g1 [Nannochloropsi... [more]
EWM19984.13.400e-1190.48hypothetical protein Naga_102461g1 [Nannochloropsi... [more]
EWM19959.11.000e-1090.48hypothetical protein Naga_102684g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04340.1NO07G04340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04340.1NO07G04340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04340 ID=NO07G04340|Name=NO07G04340|organism=Nannochloropsis oceanica|type=gene|length=844bp
ATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGTG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcattttgga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgatcccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaaggcccgcatcaaggtgtt
cacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTGC
GGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGGA
GAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGGT
GCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAGA
CTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGAG
TTGAGGCACATCGAGAGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGC
GGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGA
AAGCGGACGTCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTT
TGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACAC
TCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGA
GGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGAATTAG
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protein sequence of NO07G04340.1

>NO07G04340.1-protein ID=NO07G04340.1-protein|Name=NO07G04340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAELRHIESKAAAEIAQAKAEIARVEDKAAAEIAQAKADV
ARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGT
GGLEEKEEEN*
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Synonyms
Publications