NO07G04340, NO07G04340 (gene) Nannochloropsis oceanica

Overview
NameNO07G04340
Unique NameNO07G04340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length844
Alignment locationchr7:1212956..1213799 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1212956..1213799 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 238.8 bits (608), Expect = 1.500e-59
Identity = 168/210 (80.00%), Postives = 168/210 (80.00%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            MLALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIK                      XXXXXXXXXXXXXXXX  XXXXXXXXXXXXXX              REVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIK-----------YVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 199
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 234.6 bits (597), Expect = 2.900e-58
Identity = 136/210 (64.76%), Postives = 137/210 (65.24%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            MLALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIK                                                                    REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIARVEDKRAMSEV------------------------------------FWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 174
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 226.5 bits (576), Expect = 7.800e-56
Identity = 172/210 (81.90%), Postives = 176/210 (83.81%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            +LALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE+                          +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  REVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEI----------------------KYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 269
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 221.5 bits (563), Expect = 2.500e-54
Identity = 191/210 (90.95%), Postives = 193/210 (91.90%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            MLALLLAAIINHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ    TEIK      XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 206
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 220.7 bits (561), Expect = 4.300e-54
Identity = 170/210 (80.95%), Postives = 173/210 (82.38%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            MLALLLAAIINHDHQGDNMLRRFTAKAGAMAR GSTLPGPGKGRVLRG FSST HTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTE+                          +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  REVQLAYTQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEI----------------------KYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 188
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 218.0 bits (554), Expect = 2.800e-53
Identity = 171/200 (85.50%), Postives = 172/200 (86.00%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            NHDHQGDNMLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIK         XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            REVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIK-------YIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 216.9 bits (551), Expect = 6.200e-53
Identity = 125/200 (62.50%), Postives = 126/200 (63.00%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            NHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIK                                                                    REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIK------------------------------------------------------------YAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 214
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana])

HSP 1 Score: 210.3 bits (534), Expect = 5.800e-51
Identity = 182/200 (91.00%), Postives = 183/200 (91.50%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            NHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIK       XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   72 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 267
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 208.0 bits (528), Expect = 2.900e-50
Identity = 173/214 (80.84%), Postives = 174/214 (81.31%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIK--------------XXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            NHDHQGD MLRRFTAKAGAMAR GSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIK              XXXXXXXXXXXXX   XXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGG  G EEKEEEN
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGISGSEEKEEEN 287
[Close]
BLAST of NO07G04340 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 199.9 bits (507), Expect = 7.800e-48
Identity = 141/199 (70.85%), Postives = 144/199 (72.36%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKXXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 211
            H   GDNMLRRFTAKAGAMAR GSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTE+                          +        XXXXXXXXXXXXXXXXXXXXXXXX              REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEI----------------------KYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 206
The following BLAST results are available for this feature:
BLAST of NO07G04340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20009.11.500e-5980.00hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20057.12.900e-5864.76hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20066.17.800e-5681.90hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM20041.12.500e-5490.95hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM19993.14.300e-5480.95hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20060.12.800e-5385.50hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20114.16.200e-5362.50hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20054.15.800e-5191.00hypothetical protein Naga_102018g1 [Nannochloropsi... [more]
EWM20119.12.900e-5080.84hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20145.17.800e-4870.85hypothetical protein Naga_101508g3 [Nannochloropsi... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04340.1NO07G04340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04340.1NO07G04340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04340 ID=NO07G04340|Name=NO07G04340|organism=Nannochloropsis oceanica|type=gene|length=844bp
ATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGTG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcattttgga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgatcccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaaggcccgcatcaaggtgtt
cacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTGC
GGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGGA
GAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGGT
GCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAGA
CTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGAG
TTGAGGCACATCGAGAGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGC
GGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGA
AAGCGGACGTCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTT
TGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACAC
TCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGA
GGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGAATTAG
back to top

protein sequence of NO07G04340.1

>NO07G04340.1-protein ID=NO07G04340.1-protein|Name=NO07G04340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAELRHIESKAAAEIAQAKAEIARVEDKAAAEIAQAKADV
ARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGT
GGLEEKEEEN*
back to top
Synonyms
Publications