NO07G04290, NO07G04290 (gene) Nannochloropsis oceanica

Overview
NameNO07G04290
Unique NameNO07G04290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length779
Alignment locationchr7:1204136..1204914 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1204136..1204914 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 256.1 bits (653), Expect = 8.300e-65
Identity = 141/175 (80.57%), Postives = 144/175 (82.29%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAAAEIA+                          EVFWKAEVERFKRE+QLA+TQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIARV------------------EDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 157
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 246.9 bits (629), Expect = 5.000e-62
Identity = 159/182 (87.36%), Postives = 161/182 (88.46%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEI-------AQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQS+AAAEI          XXXXXXX  XXXXXXXXXXXXXX  EVFWKAEVER KRE+QLAYTQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDK 182
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 238.4 bits (607), Expect = 1.800e-59
Identity = 148/160 (92.50%), Postives = 152/160 (95.00%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            H   GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEIKY++SKAAAEIAQ XXXXXXXXXXXXXXXXXXXXXXX  EVFWKAEVERFKRE+QLAYTQDYEPYQAAL+DK
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDK 189
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 235.3 bits (599), Expect = 1.500e-58
Identity = 157/178 (88.20%), Postives = 159/178 (89.33%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQA-------XXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQA       XXXXXXXXXXXXXXXXXXXXXXXXX           KRE+QLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 231.5 bits (589), Expect = 2.200e-57
Identity = 151/171 (88.30%), Postives = 154/171 (90.06%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            +LALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAA      XXXXXXXXXXXXXXXXXXXXXXXXX          FKRE+QLAYTQDYEPYQAALVDK
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 252
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 230.3 bits (586), Expect = 4.900e-57
Identity = 151/171 (88.30%), Postives = 153/171 (89.47%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSSTAHTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAA      XXXXXXXXXXXXXXXXXXXXXXXXX          FKRE+QLAYTQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 171
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 220.7 bits (561), Expect = 3.800e-54
Identity = 149/197 (75.63%), Postives = 153/197 (77.66%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEI--------------------------------AQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEI                                   XXXXXXXXXXXXXXXXXXXXXXX  EVFWKAEVERFKRE+QLA+TQDYEPYQAALVDK
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 270
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 216.9 bits (551), Expect = 5.600e-53
Identity = 145/176 (82.39%), Postives = 149/176 (84.66%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYV-----------QSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY+                      XXXXXXXXXXXXXXXXXXXXXXXXXE+FWKAEVERFKRE+QLA+TQDYEPYQAALVDK
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDK 246
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 210.7 bits (535), Expect = 4.000e-51
Identity = 147/189 (77.78%), Postives = 150/189 (79.37%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKA------------------AAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQTEIKYVQSKA                         XXXXXXXXXXXXXXXXXXXXXXXXX            RE+QLA+TQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDK 189
[Close]
BLAST of NO07G04290 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 207.6 bits (527), Expect = 3.400e-50
Identity = 116/161 (72.05%), Postives = 119/161 (73.91%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXEVFWKAEVERFKREIQLAYTQDYEPYQAALVDK 172
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE+       A EI                                 AEVERFKRE+QLA+TQDYEPYQAALVDK
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEM-------APEIKY-------------------------------AEVERFKREVQLAFTQDYEPYQAALVDK 197
The following BLAST results are available for this feature:
BLAST of NO07G04290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20057.18.300e-6580.57hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20009.15.000e-6287.36hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20145.11.800e-5992.50hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20019.11.500e-5888.20hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20066.12.200e-5788.30hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM19993.14.900e-5788.30hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20119.13.800e-5475.63hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20060.15.600e-5382.39hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20041.14.000e-5177.78hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20114.13.400e-5072.05hypothetical protein Naga_101734g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04290.1NO07G04290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04290.1NO07G04290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04290 ID=NO07G04290|Name=NO07G04290|organism=Nannochloropsis oceanica|type=gene|length=779bp
ATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgattccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcgtcaaggtgt
tcacgcacacgcacatctatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGCTTCTCCTCGACAGCCCACACGGGGCCGGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGAGATCGCGCAGGC
GAAAGCGGAGATCGTGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGC
GTTTGGAAGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTG
GAGCGGTTCAAGCGCGAGATCCAACTGGCTTACACTCAAGACTATGAGCC
TTACCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCG
GATCGGAGGAGAAGGAAGAGGAGAATTAG
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protein sequence of NO07G04290.1

>NO07G04290.1-protein ID=NO07G04290.1-protein|Name=NO07G04290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=189bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIK
YVQSKAAAEIAQAKAEIVRVEDKAAAEIARLEDKRTMSEVFWKAEVERFK
REIQLAYTQDYEPYQAALVDKRKKRGGTGGSEEKEEEN*
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Synonyms
Publications