NO07G04280, NO07G04280 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana]) HSP 1 Score: 269.2 bits (687), Expect = 1.000e-68 Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQS+AAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXX MSEVFWKAEVER KREVQLAYTQDYEPYQAALVDK
Sbjct: 1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDK 182
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana]) HSP 1 Score: 264.6 bits (675), Expect = 2.500e-67 Identity = 146/182 (80.22%), Postives = 148/182 (81.32%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI ED MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct: 1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI--------------ARVED-----------KRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 157
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana]) HSP 1 Score: 240.4 bits (612), Expect = 5.000e-60 Identity = 163/197 (82.74%), Postives = 167/197 (84.77%), Query Frame = 0
Query: 11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXED-------------------------XXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
NHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY++SKAAAEIXXXXXXXXXXXXXXXXXED XXXXXXXXXXXXX MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct: 74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 270
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana]) HSP 1 Score: 227.3 bits (578), Expect = 4.300e-56 Identity = 153/176 (86.93%), Postives = 157/176 (89.20%), Query Frame = 0
Query: 11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYV----QSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
NHD+QGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY+ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXX E+FWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct: 71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDK 246
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 1.700e-55 Identity = 146/171 (85.38%), Postives = 149/171 (87.13%), Query Frame = 0
Query: 12 HDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
H GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKY++SKAAAEI XXXXXXXX XXXXXXXXXXXXX MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DK
Sbjct: 30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEI-------AQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDK 189
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana]) HSP 1 Score: 223.4 bits (568), Expect = 6.300e-55 Identity = 154/182 (84.62%), Postives = 156/182 (85.71%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ TEIKYVQSKAAAEI XXXXXXXXXXXXXX XXXXXXXXXXXXX KREVQLAYTQDYEPYQAAL+DK
Sbjct: 1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana]) HSP 1 Score: 214.5 bits (545), Expect = 2.900e-52 Identity = 150/182 (82.42%), Postives = 153/182 (84.07%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
+LA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ TEIKYVQSKAA XXXXXXXXXXXXX XXXXXXXXXXXXX FKREVQLAYTQDYEPYQAALVDK
Sbjct: 82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 252
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana]) HSP 1 Score: 213.4 bits (542), Expect = 6.500e-52 Identity = 150/182 (82.42%), Postives = 152/182 (83.52%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
MLA LLAAIINHD+QGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSST HTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKYVQSKAA XXXXXXXXXXXXX XXXXXXXXXXXXX FKREVQLAYTQDYEPYQAALVDK
Sbjct: 1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 171
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana]) HSP 1 Score: 211.5 bits (537), Expect = 2.500e-51 Identity = 118/172 (68.60%), Postives = 120/172 (69.77%), Query Frame = 0
Query: 11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
NHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIKY AEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct: 75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKY-------------------------------------------------AEVERFKREVQLAFTQDYEPYQAALVDK 197
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana]) HSP 1 Score: 200.7 bits (509), Expect = 4.400e-48 Identity = 150/193 (77.72%), Postives = 153/193 (79.27%), Query Frame = 0
Query: 1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------AAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ TEIKYVQSKA XXXXXXXXXXXXXXXXX XXXXXXXXXXXXX REVQLA+TQDYEPYQAALVDK
Sbjct: 1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDK 189 The following BLAST results are available for this feature:
BLAST of NO07G04280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04280 ID=NO07G04280|Name=NO07G04280|organism=Nannochloropsis oceanica|type=gene|length=936bpback to top protein sequence of NO07G04280.1 >NO07G04280.1-protein ID=NO07G04280.1-protein|Name=NO07G04280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bpback to top Synonyms
Publications
|