NO07G04280, NO07G04280 (gene) Nannochloropsis oceanica

Overview
NameNO07G04280
Unique NameNO07G04280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length936
Alignment locationchr7:1202238..1203173 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1202238..1203173 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 269.2 bits (687), Expect = 1.000e-68
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQS+AAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXX MSEVFWKAEVER KREVQLAYTQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDK 182          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 264.6 bits (675), Expect = 2.500e-67
Identity = 146/182 (80.22%), Postives = 148/182 (81.32%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI                 ED              MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI--------------ARVED-----------KRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 157          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 240.4 bits (612), Expect = 5.000e-60
Identity = 163/197 (82.74%), Postives = 167/197 (84.77%), Query Frame = 0
Query:   11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXED-------------------------XXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            NHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY++SKAAAEIXXXXXXXXXXXXXXXXXED                         XXXXXXXXXXXXX MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDK 270          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 227.3 bits (578), Expect = 4.300e-56
Identity = 153/176 (86.93%), Postives = 157/176 (89.20%), Query Frame = 0
Query:   11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYV----QSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            NHD+QGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY+            XXXXXXXXXXXXXXXXX  XXXXXXXXXXXXX   E+FWKAEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDK 246          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 225.3 bits (573), Expect = 1.700e-55
Identity = 146/171 (85.38%), Postives = 149/171 (87.13%), Query Frame = 0
Query:   12 HDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            H   GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEI         XXXXXXXX  XXXXXXXXXXXXX MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DK
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEI-------AQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDK 189          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 223.4 bits (568), Expect = 6.300e-55
Identity = 154/182 (84.62%), Postives = 156/182 (85.71%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAAAEI   XXXXXXXXXXXXXX  XXXXXXXXXXXXX              KREVQLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 214.5 bits (545), Expect = 2.900e-52
Identity = 150/182 (82.42%), Postives = 153/182 (84.07%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            +LA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA       XXXXXXXXXXXXX  XXXXXXXXXXXXX             FKREVQLAYTQDYEPYQAALVDK
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 252          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 213.4 bits (542), Expect = 6.500e-52
Identity = 150/182 (82.42%), Postives = 152/182 (83.52%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHD+QGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSST HTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA       XXXXXXXXXXXXX  XXXXXXXXXXXXX             FKREVQLAYTQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAA-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDK 171          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 211.5 bits (537), Expect = 2.500e-51
Identity = 118/172 (68.60%), Postives = 120/172 (69.77%), Query Frame = 0
Query:   11 NHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            NHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIKY                                                 AEVERFKREVQLA+TQDYEPYQAALVDK
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKY-------------------------------------------------AEVERFKREVQLAFTQDYEPYQAALVDK 197          
BLAST of NO07G04280 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 200.7 bits (509), Expect = 4.400e-48
Identity = 150/193 (77.72%), Postives = 153/193 (79.27%), Query Frame = 0
Query:    1 MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------AAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 183
            MLA LLAAIINHD+QGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ    TEIKYVQSKA               XXXXXXXXXXXXXXXXX  XXXXXXXXXXXXX               REVQLA+TQDYEPYQAALVDK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDK 189          
The following BLAST results are available for this feature:
BLAST of NO07G04280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20009.11.000e-6895.60hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20057.12.500e-6780.22hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20119.15.000e-6082.74hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20060.14.300e-5686.93hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20145.11.700e-5585.38hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20019.16.300e-5584.62hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20066.12.900e-5282.42hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM19993.16.500e-5282.42hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20114.12.500e-5168.60hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20041.14.400e-4877.72hypothetical protein Naga_102106g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04280.1NO07G04280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|339300gene_2781Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04280.1NO07G04280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04280 ID=NO07G04280|Name=NO07G04280|organism=Nannochloropsis oceanica|type=gene|length=936bp
ATGCTTGCCTCGCTGCTTGCTGCCATCATCAACCACGACTACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggaatgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgattcccccctttgtctgcgtgtctgtg
tcgtttgcgttgcaatctttgttatgcggacaagggcccgcgtcaaggtg
ttcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCT
GCGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTG
GAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAAGGCATTGGCGCG
GTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCA
GACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGG
AGATCGCGCAGGCGAAAGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCG
CGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCGTGTGGAAGACAAGCG
GACTATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCG
AGGTCCAACTAGCTTACACTCAAGACTATGAGCCTTACCAGGCCGCGCTT
GTGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATCGGAGGAGAAGGA
AGAGGAGAATTAGGATTCGGGGCCCTACCTTAATATAAATAGAAATCATG
TAGAAAGACACATTCAAAGACATGTACAGTGGACGGGGTTGTGCAGTAGA
GAGATGGGCAGGAGGGGGATAGGACTCATACACGAG
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protein sequence of NO07G04280.1

>NO07G04280.1-protein ID=NO07G04280.1-protein|Name=NO07G04280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=200bp
MLASLLAAIINHDYQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIAQAKAEIARVEDKAAAEIARVEDKRTMSE
VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGSEEKEEEN*
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Synonyms
Publications