NO07G04180, NO07G04180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04180 vs. NCBI_GenBank
Match: EWM26945.1 (hypothetical protein Naga_101205g2 [Nannochloropsis gaditana]) HSP 1 Score: 149.1 bits (375), Expect = 2.800e-32 Identity = 95/254 (37.40%), Postives = 127/254 (50.00%), Query Frame = 0 Query: 19 PAPTRLVSISLSSGIGDGGDKTEETWVEQTKYEGGKSVGDISALQIEE---PDXXXXXXXXXXXXXXXXXXXXXXXXXXLSVVGALIASFHNEILDGKQIGGKEGERGRRGGDGSSLILELLPFWHAHPLLFLLSRHFLLPPLAIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMALMPGVVK 270 P P RLVSISLSSG+ D +KTE+ E+ K EGGKS G LQI+E P SV+ A+I +H IL A WCQ ++PWS ++ G I++ A +LG PTMP E+ AG +FG GVS L+LTV+KP+G V C +L R+ LHS A++L + +++F L VA + RPWRL+LLLR+A MPGV+K Sbjct: 58 PTPIRLVSISLSSGM-DMKEKTEDAQDEEPKQEGGKSHGGAIPLQIDEAAAPSPSSKARAQPRPWWLSILFVTLSFIVIASVLVAIIMRYHEGIL-----------------------------------------------TAARWCQERQPWSIILNGCIIVGANILGFPTMPIEVLAGLMFGFGVSTLMLTVSKPVGAVLCAMLSRHLLHSCAARLVSSNQDFTALRVAFKKRPWRLMLLLRLAFMPGVIK 263
BLAST of NO07G04180 vs. NCBI_GenBank
Match: EWM20987.1 (SNARE associated Golgi protein [Nannochloropsis gaditana]) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-15 Identity = 62/175 (35.43%), Postives = 82/175 (46.86%), Query Frame = 0 Query: 162 WCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASK--------------LTAESEEFRGLLVALEWRPWRLLLLLRMALMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPV 323 W Q + P SAL Y ++ LL +P+ E+ GFIFGL V+ L + VAKP G LLGR + R L +A+E PW++ LLLR +P VKNYG+A LP P LC +PY+LLW+ G+ SL +L G R V Sbjct: 122 WVQARAPLSALYYAAFTVLWVLLCLPSTLIELCGGFIFGLPVTLLTVGVAKPFGCCLAFLLGRCVAADSLRQGLLLPPVRXXXXXXXXXXXXXXRALFLAMERHPWKVTLLLRFMYLPIAVKNYGMAALP-CPFPVFALCTLAASLPYTLLWAHAGASSRSLYDVLGGGGGRRQV 295
BLAST of NO07G04180 vs. NCBI_GenBank
Match: WP_101521795.1 (TVP38/TMEM64 family protein [Chromatocurvus sp. F02] >PLW82543.1 alkaline phosphatase [Chromatocurvus sp. F02]) HSP 1 Score: 82.0 bits (201), Expect = 4.200e-12 Identity = 64/219 (29.22%), Postives = 107/219 (48.86%), Query Frame = 0 Query: 145 LLFLLSRHFLLPPLAIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRM-ALMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAVEASKREAEESKDE 363 LL+ +LL LA W + + W+A+++ LI+ A +L +P + AGF+FG+ L++ V +G L+ R+ L S A++ E E+ R + + W+++LL RM P V NY L + L +FLG +P+S+ ++GS L + E ++ RTPVE L LG + ++ V + A+ E E KD+ Sbjct: 22 LLYFGVHEWLLEVLA--WVEAQGAWAAVLFVLIMAAAVVLTLPGIFLTTGAGFVFGVVQGSLLVVVGTTLGAAIAFLIARHLLGSRATRFILEHEQLRLINAEMARHGWKVVLLTRMIPFFPSKVANYFYG-LTTFRFRGYLLGSFLGFIPFSVHNVYLGSIVGDLAAITERDLGRTPVEWTLYGLGFVVTIIAVIYFNRLARRALAGYAEEDAEIKDK 237
BLAST of NO07G04180 vs. NCBI_GenBank
Match: OGB92722.1 (hypothetical protein A2Z31_01070 [candidate division NC10 bacterium RBG_16_65_8]) HSP 1 Score: 80.1 bits (196), Expect = 1.600e-11 Identity = 49/192 (25.52%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 159 AIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAV 350 A+ W Q PW + + L+ I+AT+L +P + AG +FG+ ++++++ +G +GRY + SK + F+ + A+ W+++ L R++ + P + NY + P L +++G MP +L++ ++GS SL + + RTP E AL ++G++ V++ V + A+ Sbjct: 16 ALDWIQSLGPWGPMTFALLYILATVLFLPGSILTLGAGVVFGVLKGSILVSISSTLGATAAFFVGRYLARGWVSKQIEGNATFKAIDEAVAHEGWKIVGLTRLSPVFPFNLLNYAFGVTRVAP-RDYILASWIGMMPGTLMYVYIGSLAGSLATLGAEQRVRTPAEWALYVVGLLATVIVTVYVTRIARAAL 206
BLAST of NO07G04180 vs. NCBI_GenBank
Match: OUU32432.1 (hypothetical protein CBC17_02140 [Gammaproteobacteria bacterium TMED57]) HSP 1 Score: 79.7 bits (195), Expect = 2.100e-11 Identity = 53/201 (26.37%), Postives = 102/201 (50.75%), Query Frame = 0 Query: 162 WCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAVEASKREAEESKD 362 W Q + ++ + A +L +P + AG++FGLG F+I+++A +G L+GR+F + ++ F L A+ R ++LL R++ P + NY + L +P+ T ++LG MP +LL+ ++GS +L + GE+A +PV L LG+ + L + GA++ + ++E+++ Sbjct: 33 WVQANPTIAWAVFIAFYVAAVVLMLPGSLLTLGAGYLFGLGYGFVIVSLASTVGATCAFLVGRFFARDWVAEKLGAMPRFAALDRAVGERGALVVLLTRLSPAFPFTLLNYALG-LTRVPLKTYVFVSWLGMMPGTLLYVYLGSIAQNLTALFSGELAESPVGNILLYLGLAATLALTILITRFASGALDQQLQTSDEAEE 232
BLAST of NO07G04180 vs. NCBI_GenBank
Match: EWM26944.1 (hypothetical protein Naga_101205g2 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-11 Identity = 72/254 (28.35%), Postives = 92/254 (36.22%), Query Frame = 0 Query: 19 PAPTRLVSISLSSGIGDGGDKTEETWVEQTKYEGGKSVGDISALQIEE---PDXXXXXXXXXXXXXXXXXXXXXXXXXXLSVVGALIASFHNEILDGKQIGGKEGERGRRGGDGSSLILELLPFWHAHPLLFLLSRHFLLPPLAIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMALMPGVVK 270 P P RLVSISLSSG+ D +KTE+ E+ K EGGKS G LQI+E P SV+ A+I +H IL A WCQ ++PWS ++ G I++ A +LG PTMP E+F L VA + RPWRL+LLLR+A MPGV+K Sbjct: 58 PTPIRLVSISLSSGM-DMKEKTEDAQDEEPKQEGGKSHGGAIPLQIDEAAAPSPSSKARAQPRPWWLSILFVTLSFIVIASVLVAIIMRYHEGIL-----------------------------------------------TAARWCQERQPWSIILNGCIIVGANILGFPTMPI-----------------------------------------------EDFTALRVAFKKRPWRLMLLLRLAFMPGVIK 216
BLAST of NO07G04180 vs. NCBI_GenBank
Match: XP_011090800.1 (uncharacterized protein LOC105171397 [Sesamum indicum]) HSP 1 Score: 79.0 bits (193), Expect = 3.500e-11 Identity = 59/206 (28.64%), Postives = 101/206 (49.03%), Query Frame = 0 Query: 160 IYWCQRK-RPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAVEASKREAEESKDEF 364 + W Q PW L+ + I T+L +P + G++FGL V F+ +V IG LLGR SY + +FR + +A+ ++++LLLR+ L+P + NY +++ P +PI L ++LG MP + +VG+ L + G + A L+G++ VLL+ V + A+E + E E+ +F Sbjct: 40 LVWIQEDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSVGATIGAGAAFLLGRTIGRSYVISKLKDYPKFRAVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPIAQYMLASWLGMMPITFALVYVGTTLKDLSDVTHGWHDFSKTRWAFILIGLVVSVLLMICVTRVAKAALEKALAENEDVDADF 244
BLAST of NO07G04180 vs. NCBI_GenBank
Match: WP_092377415.1 (TVP38/TMEM64 family protein [Desulfomicrobium apsheronum] >SFK22639.1 Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Desulfomicrobium apsheronum]) HSP 1 Score: 79.0 bits (193), Expect = 3.500e-11 Identity = 58/221 (26.24%), Postives = 110/221 (49.77%), Query Frame = 0 Query: 133 ILELLPFWHAHPLLFLLSRHFLLPPL---AIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAV 350 +L++L A LL +R+F + L A+ W P +++ + I+A +L +P + AG +FGLG F+ ++V +G L+GRY + + A +E+FR + A+ W+++ L R++ + P + NY L + + FL +++G +P ++++ ++GS L G+ G RT E AL +G + V + V + A+ Sbjct: 12 VLKILAMLLAAGLLLAAARYFDVQTLFRQALQWIADLGPTGPILFVALYIIACVLLLPGSILTLGAGVVFGLGKGFIAVSVGATLGATCAFLVGRYLARDWVAAKIAGNEKFRAVDDAVAREGWKIVFLTRLSPVFPFNILNYAFG-LTKVGLKDFFLASWIGMIPGTIMYVYIGSLAGDLAGLGAGGRERTAGEWALYGVGFLATVAVTVVVTRLARKAL 231
BLAST of NO07G04180 vs. NCBI_GenBank
Match: PIN00227.1 (hypothetical protein CDL12_27269 [Handroanthus impetiginosus]) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 59/218 (27.06%), Postives = 104/218 (47.71%), Query Frame = 0 Query: 147 FLLSRHFLLPPLAIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAVEASKREAEESKDEF 364 F L +L ++ Q PW L+ + I T+L +P + G++FGL V F+ ++ IG LLGR SY + +FR + +A+ ++++LLLR+ L+P + NY +++ P +PI L ++LG MP + +VG+ L + G + A L+G + V+L+ V + A+E + E E+ +F Sbjct: 28 FTLPIEQILKDFLVWIEQDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGRSYVISKLKDYPKFRAVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTP-VPITQYMLASWLGMMPITFALVYVGTTLKDLSDVTHGWHEFSKTRWAFILMGFVVSVVLIICVMRVAKAALEKALAENEDIDGDF 244
BLAST of NO07G04180 vs. NCBI_GenBank
Match: EYU41539.1 (hypothetical protein MIMGU_mgv1a022962mg [Erythranthe guttata]) HSP 1 Score: 77.0 bits (188), Expect = 1.300e-10 Identity = 56/212 (26.42%), Postives = 104/212 (49.06%), Query Frame = 0 Query: 149 LSRHFLLPPLAIYWCQRKRPWSALIYGLIVIVATLLGIPTMPFEIAAGFIFGLGVSFLILTVAKPIGVVGCLLLGRYFLHSYASKLTAESEEFRGLLVALEWRPWRLLLLLRMA-LMPGVVKNYGVALLPSLPILTVFLCAFLGDMPYSLLWSFVGSRGASLVGMLEGEMARTPVETALSLLGIIFLVLLVAGVRHTVQGAVEASKREAEES 360 + R ++L ++ + PW L+ L I T+L +P + G++FGL V F+ ++ IG LLGR SY + +FR + +A++ ++++LLLR+ L+P + Y +++ P +PI L + LG MP + +VG+ L + G + A L+G++ V+L+ V + A+E + E E++ Sbjct: 32 MKRLYILKDFLLWIEKDLGPWGPLVLALAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGRSYVISKLKDYPKFRAIAIAIQRSGFKIVLLLRLVPLLPFTMLTYLLSVTP-VPIALYMLASCLGMMPITFALVYVGTTLKDLSDVTHGWHDFSKTRWAFILMGLVVSVVLLVCVTRVAKAALEKALAENEDT 242 The following BLAST results are available for this feature:
BLAST of NO07G04180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04180 ID=NO07G04180|Name=NO07G04180|organism=Nannochloropsis oceanica|type=gene|length=1921bpback to top protein sequence of NO07G04180.1 >NO07G04180.1-protein ID=NO07G04180.1-protein|Name=NO07G04180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bpback to top protein sequence of NO07G04180.2 >NO07G04180.2-protein ID=NO07G04180.2-protein|Name=NO07G04180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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