NO07G03880, NO07G03880 (gene) Nannochloropsis oceanica

Overview
NameNO07G03880
Unique NameNO07G03880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2447
Alignment locationchr7:1081196..1083642 -

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Properties
Property NameValue
DescriptionHistone deacetylase superfamily protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1081196..1083642 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023696Ureohydrolase_domain
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
Homology
BLAST of NO07G03880 vs. NCBI_GenBank
Match: XP_005852771.1 (histone deacetylase superfamily protein, partial [Nannochloropsis gaditana CCMP526] >EKU23062.1 histone deacetylase superfamily protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 382.5 bits (981), Expect = 1.800e-102
Identity = 208/400 (52.00%), Postives = 252/400 (63.00%), Query Frame = 0
Query:   16 SVGAAV---IVTVIEELLGQPLPQLTKLGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPLACLDHDIPGHFERPARVISILNALKQYAPP--LSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEV 411
            +VGAA    +  VIEE LG+PLP+L K                                          +SP ACL H+IPGHFERPAR+ +IL+AL    PP                  AFLLS+ D P AT EQL RFH+ QH+  L SLFA S+                                   +Y   +++DID DT VCPGTEEA LRAAGAACRGV+EV+EGRAE+V+C+VRPPGHHATP ++MGFCF N+ GVAAMHARA++GV+RVA+LDPDVHHGNGTQD    DPDLFYASTHVGYGFYPG+G +++ +GRE RLVNVPFREGEGSS++FRQAW +EIFP L+ F+PELI++SMGFDA  EDPLGEMEL  +D+ W +R V  V
Sbjct:   12 TVGAATVGGVNAVIEEWLGKPLPRLCK---------------GVPPCPQARPSFRLPPPEPLPPYPLLVISPPACLKHNIPGHFERPARLTAILHALH---PPSRXXXXXXXXXXXXXXXXAFLLSDADCPRATHEQLARFHTTQHLAHLASLFAESQTLAATSQVQEPSHLDPSSSPHLF-----------PSYPPASLIDIDGDTTVCPGTEEATLRAAGAACRGVEEVMEGRAESVWCLVRPPGHHATPSQSMGFCFVNHAGVAAMHARARYGVRRVAVLDPDVHHGNGTQDGFRDDPDLFYASTHVGYGFYPGTGSRKDAKGREDRLVNVPFREGEGSSEKFRQAWAEEIFPKLRKFQPELIILSMGFDAVAEDPLGEMELRPEDFEWFSREVRRV 382          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: EWM26976.1 (histone deacetylase superfamily protein [Nannochloropsis gaditana])

HSP 1 Score: 271.2 bits (692), Expect = 5.900e-69
Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 0
Query:  242 LEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEV 411
            +EGRAE+V+C+VRPPGHHATP ++MGFCF N+ GVAAMHARA++GV+RVA+LDPDVHHGNGTQD    DPDLFYASTHVGYGFYPG+G +++ +GRE RLVNVPFREGEGSS++FRQAW +EIFP L+ F+PELI++SMGFDA  EDPLGEMEL  +D+ W +R V  V
Sbjct:    1 MEGRAESVWCLVRPPGHHATPSQSMGFCFVNHAGVAAMHARARYGVRRVAVLDPDVHHGNGTQDGFRDDPDLFYASTHVGYGFYPGTGSRKDAKGREDRLVNVPFREGEGSSEKFRQAWAEEIFPKLRKFQPELIILSMGFDAVAEDPLGEMELRPEDFEWFSREVRRV 169          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_056008792.1 (acetoin utilization protein [Frateuria sp. Soil773] >KRE88772.1 acetoin utilization protein [Frateuria sp. Soil773])

HSP 1 Score: 230.7 bits (587), Expect = 8.800e-57
Identity = 140/334 (41.92%), Postives = 175/334 (52.40%), Query Frame = 0
Query:   86 ACLDHDI-PGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE--GGR 417
            ACL HD  PGH E P+R+ ++L AL                         L   ++P ATREQL R H+  H+E +F+       A  DE                                         DT + PG+ EAALRAAGA    VD VL+G     FC VRPPGHHATPDRAMGFC FNNV VAA HA A HG+KRVAI D DVHHGNGTQD    +P + + S+H     YP SG+  E+E   G +VN     G   S  FR+ W+  + P L AF P+L+L+S GFDA R DPL ++ L A+DY W+T  ++E+AR+  GGR
Sbjct:    9 ACLQHDPGPGHAESPSRLRAVLQALDH------------------DRFASLDRVEAPRATREQLLRVHTPAHLERIFAGEPADGTAALDE-----------------------------------------DTAMSPGSLEAALRAAGACVAAVDAVLQGAVARAFCAVRPPGHHATPDRAMGFCLFNNVAVAAAHALAAHGLKRVAIADFDVHHGNGTQDVFAAEPRVLFLSSHQS-PLYPDSGY--EDEHGAGNIVNGCLSPG-ADSLEFRELWDGLLLPRLHAFRPQLVLVSAGFDAHRNDPLADLRLGAEDYAWITGRLVELARQHAGGR 279          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: XP_012198666.1 (hypothetical protein SPRG_04346 [Saprolegnia parasitica CBS 223.65] >KDO30444.1 hypothetical protein SPRG_04346 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 228.8 bits (582), Expect = 3.300e-56
Identity = 136/332 (40.96%), Postives = 183/332 (55.12%), Query Frame = 0
Query:   82 LSPLACLDHDIPGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE 414
            LS  AC+ H + GH ERP RV  +L+ L    P  +LP  +                 SP AT EQL RFH+  H++++     + +  + +                             K++ +   +D+DADT +   T EAAL+AAGA   GVD VL G     FC VRPPGHHA P +AMGFC+FNNVGVAAMHA A+HG+ RVAI+D DVHHGNGTQ      P+L Y STH    F+P +GH  E       + NVP   G  SS  FR A+  ++ P ++AF P+LIL+S GFDA  +DPL EM+L  +D++W+T+ +  +A E
Sbjct:   16 LSDPACVKHHVRGHPERPERVQVVLDQLATSFP--TLPHWTA----------------SPAATVEQLERFHTSSHVQSVLQWCGKIERCMVELDTLRESDETQERRNVL------------KSFEN---VDVDADTTLMRYTREAALKAAGATIAGVDAVLSGDFTNAFCAVRPPGHHAEPFKAMGFCYFNNVGVAAMHAVAQHGLTRVAIVDFDVHHGNGTQTKAATTPELLYVSTHQA-PFFPHTGHAAE---NSAHVWNVPMAAGT-SSYAFRHAFVDQVEPQVRAFAPQLILISAGFDAHEDDPLAEMKLTDEDFYWMTQRLTILAWE 309          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_091340205.1 (acetoin utilization protein [Frateuria terrea] >SEJ44708.1 Acetoin utilization deacetylase AcuC [Frateuria terrea] >SFP77764.1 Acetoin utilization deacetylase AcuC [Frateuria terrea])

HSP 1 Score: 227.6 bits (579), Expect = 7.400e-56
Identity = 139/334 (41.62%), Postives = 176/334 (52.69%), Query Frame = 0
Query:   86 ACLDHDI-PGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVAR--EGGR 417
            ACL HD  PGH E PAR+ ++L AL +                       L   ++PLA+ E L R H   ++       AR  A+   E                                   +L +D DT + P + EAALRAAGA    VD  L+ RA   FC VRPPGHHAT D+AMGFC FNNV V A HA A+HG++RVAI D DVHHGNGTQD    +P + + S+H     YPGSG  +E     G L+N P   G G S  FRQ W++++ P L AF P+L+L+S GFDA R DPL ++EL A DY WLT  ++E+AR   GGR
Sbjct:    9 ACLQHDPGPGHPESPARLRAVLAALDR------------------DRFAALDRIEAPLASTEALERVHDPAYV-------ARILASAPAE----------------------------------GVLRLDEDTVMSPASAEAALRAAGAVVAAVDAALDERASRAFCAVRPPGHHATADQAMGFCLFNNVAVGAAHALAEHGLERVAIADFDVHHGNGTQDIFAREPRVLFVSSHQS-PLYPGSGGADET--GVGNLLNAPLPPGTG-SLAFRQTWDEQLLPRLDAFRPQLLLISAGFDAHRADPLAQLELGADDYAWLTSRLLEIARAHAGGR 279          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_092704282.1 (acetoin utilization protein [Rhodanobacter glycinis] >SFK97812.1 Acetoin utilization deacetylase AcuC [Rhodanobacter glycinis])

HSP 1 Score: 227.6 bits (579), Expect = 7.400e-56
Identity = 138/334 (41.32%), Postives = 178/334 (53.29%), Query Frame = 0
Query:   86 ACLDHDI-PGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVAR--EGGR 417
            +CL HD  PGH E PAR+ ++L+AL                         L   ++P ATREQL R H   H+E +         A   E                                   +L +D DT + PG+ EAALRAAGA    VD V+ G     FC VRPPGHHATPD AMGFC FNNV VAA HA A HG+KRVAI D DVHHGNGTQ     +P + +AS+H     YP +G +E+E G  G +VN     G+G S  FR+ W+  + P L AF+P+L+L+S GFDA R+DPL  ++L ++DY W+T  ++E+AR   GGR
Sbjct:    9 SCLQHDTGPGHPESPARLAAVLHALDH------------------DRFAALDRIEAPRATREQLLRVHRAGHVERILD-------AAPSE----------------------------------GLLQLDEDTLMSPGSAEAALRAAGAMVAAVDAVIGGECRHAFCAVRPPGHHATPDHAMGFCLFNNVAVAAAHALAAHGLKRVAIADFDVHHGNGTQAIFEREPRVLFASSHES-PLYPNTG-REDERG-VGNIVNGCLSAGDG-SWAFRELWDGLLLPRLHAFKPQLVLVSAGFDAHRDDPLAGLQLGSEDYAWITAKLVELARAHAGGR 279          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_048670274.1 (acetoin utilization protein [Candidatus Competibacter denitrificans] >CDI01149.1 Histone deacetylase superfamily protein [Candidatus Competibacter denitrificans Run_A_D11])

HSP 1 Score: 227.3 bits (578), Expect = 9.700e-56
Identity = 133/329 (40.43%), Postives = 170/329 (51.67%), Query Frame = 0
Query:   86 ACLDHDI-PGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE 414
            ACL+HD  PGH E  AR+ +IL ALK                   P    L   ++P AT EQL R H+  HIE   S   R                                         N    ID DT V P +  AALRAAGA C  VD VL+G A + FC +RPPGHHA P++AMGFC FNN+ + A HARA HG++RVA +D DVHHGNGTQ     DP   Y STH  Y  YPG+G ++E       +VN+P     G+++  + AW+++I P L+ F+P+LIL+S GFDA R DPL  +     DY WLT  ++ +A E
Sbjct:   10 ACLEHDPGPGHPESSARLSAILAALK------------------APQFAALQWREAPTATVEQLARIHTPAHIERTLSHIPR-----------------------------------------NGYQAIDGDTVVSPQSGTAALRAAGAVCAAVDAVLQGEANSAFCAIRPPGHHAEPNQAMGFCLFNNIAIGAAHARAVHGLERVAAIDFDVHHGNGTQAAFEHDPAYLYISTHQAY-IYPGTGRRDER--GINNIVNIPLLANSGTAE-LQHAWQEDIEPALRRFQPQLILISAGFDAHRLDPLAGLTFTETDYAWLTEQILAIAAE 275          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: OUX91381.1 (acetoin utilization protein [Candidatus Endolissoclinum sp. TMED26])

HSP 1 Score: 227.3 bits (578), Expect = 9.700e-56
Identity = 135/330 (40.91%), Postives = 174/330 (52.73%), Query Frame = 0
Query:   87 CLDHDI-PGHFERPARVISILNAL--KQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE 414
            C+ HD  PGH E+PAR+ ++ +AL   ++A                     L     P AT  Q+TR H  +H+E L         AV  E                                    + IDADTF+ PG+  AAL AAGAAC  VD V+ G A   FC VRPPGHHA   +AMGFC FNNV +AA HAR  HG+ RVA++D DVHHGNGTQ        LF+AS+H  Y FYPGSG + E  G  G + N P   G GS++ FR AW  ++ P L+AF+P+L+++S GFD  R+DPL E  L+  DY W+T  ++ VA E
Sbjct:   11 CIAHDPGPGHPEQPARLAAVRDALAAAEFAD--------------------LKRQTPPPATITQITRVHPREHVEGLLQ-------AVPSEGR----------------------------------VMIDADTFMSPGSGRAALLAAGAACAAVDAVIGGAATNAFCAVRPPGHHAETAQAMGFCLFNNVAIAAEHARQAHGLTRVAVVDFDVHHGNGTQHSFAHQEGLFFASSH-QYPFYPGSGAESETGG--GNIHNAPLPAGAGSTE-FRHAWSHQLLPALRAFQPQLVIVSAGFDGHRDDPLAEFALDDDDYAWITDALLTVAAE 275          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_088153128.1 (acetoin utilization protein [Inquilinus limosus] >OWJ65011.1 acetoin utilization protein [Inquilinus limosus])

HSP 1 Score: 227.3 bits (578), Expect = 9.700e-56
Identity = 138/334 (41.32%), Postives = 175/334 (52.40%), Query Frame = 0
Query:   86 ACLDHDI-PGHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE--GGR 417
            AC+ HD  PGH ERP R+ ++L AL+                    S  LL   ++P AT EQ+   H    +  L        AAV ++                                   +  IDADT + PG+  AALRAAGA C  VD VL G A   FC VRPPGHHA   RAMGFC FN+V +AAMHAR  HG++R+A++D DVHHGNGTQD    +PDLFYASTH     YPG+G  E+E G  G ++N P     G  + FR+A E+ + P + AF PEL+L+S GFDA   DPL  +EL   D+ W T  +M +A    GGR
Sbjct:   10 ACIGHDTGPGHPERPDRLRAVLTALED------------------ESFALLQRREAPEATIEQIALAHPDAFVRRLL-------AAVPED----------------------------------GLQPIDADTVLSPGSGAAALRAAGAGCAAVDAVLAGEARNAFCAVRPPGHHAEATRAMGFCLFNSVAIAAMHARLAHGLQRIAVVDFDVHHGNGTQDIFWSEPDLFYASTHQS-PLYPGTG-SEDETGVAGNILNAPLPPMSGGVE-FRRAMERIVLPAVDAFAPELLLISAGFDAHARDPLAHLELHEGDFAWATLELMRLADRHCGGR 281          
BLAST of NO07G03880 vs. NCBI_GenBank
Match: WP_037453424.1 (acetoin utilization protein [Skermanella stibiiresistens] >EWY39790.1 acetoin utilization protein [Skermanella stibiiresistens SB22])

HSP 1 Score: 226.9 bits (577), Expect = 1.300e-55
Identity = 137/329 (41.64%), Postives = 170/329 (51.67%), Query Frame = 0
Query:   86 ACLDHDIP-GHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTRFHSLQHIETLFSLFARSKAAVEDEXXXXXXXXXXXXXXXXXXXXXXXXXVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDYWWLTRGVMEVARE 414
            +C+DHD   GH E P R+ ++L AL+  A                     L    +P A  EQL R H   +IE       R  AA+  E                                   ++++D DT +CP + EAALRAAGA C  VD V+ G A   FC  RPPGHHA  +RAMGFC FNNV V A  AR  HG+ RVA++D DVHHGNGTQD    DP LFYASTH  +  YP +G   EE G    +VNVP  E  GS + FR A    +FP L+ F+PELI++S GFDA   DPL  + L   DY W+TR + E+ARE
Sbjct:   10 SCIDHDTGIGHPECPERLKAVLAALEGEA------------------FHFLDRRVAPRAEVEQLARVHPADYIE-------RVLAAIPSE----------------------------------GMVELDNDTILCPSSGEAALRAAGAVCAAVDAVMSGEARNAFCATRPPGHHAERERAMGFCLFNNVAVGAEQARKVHGISRVAVIDFDVHHGNGTQDIFQDDPGLFYASTHQAH-LYPNTG-LPEERGVADNIVNVPLPEMAGSPE-FRHAMMTRVFPALEHFQPELIMISAGFDAHTRDPLASLHLVDDDYVWVTRKLGELARE 276          
The following BLAST results are available for this feature:
BLAST of NO07G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852771.11.800e-10252.00histone deacetylase superfamily protein, partial [... [more]
EWM26976.15.900e-6971.60histone deacetylase superfamily protein [Nannochlo... [more]
WP_056008792.18.800e-5741.92acetoin utilization protein [Frateuria sp. Soil773... [more]
XP_012198666.13.300e-5640.96hypothetical protein SPRG_04346 [Saprolegnia paras... [more]
WP_091340205.17.400e-5641.62acetoin utilization protein [Frateuria terrea] >SE... [more]
WP_092704282.17.400e-5641.32acetoin utilization protein [Rhodanobacter glycini... [more]
WP_048670274.19.700e-5640.43acetoin utilization protein [Candidatus Competibac... [more]
OUX91381.19.700e-5640.91acetoin utilization protein [Candidatus Endolissoc... [more]
WP_088153128.19.700e-5641.32acetoin utilization protein [Inquilinus limosus] >... [more]
WP_037453424.11.300e-5541.64acetoin utilization protein [Skermanella stibiires... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000459NSK000459Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03880.2NO07G03880.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G03880.1NO07G03880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525395gene_2731Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100127g21gene3571Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03880.2NO07G03880.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G03880.1NO07G03880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03880 ID=NO07G03880|Name=NO07G03880|organism=Nannochloropsis oceanica|type=gene|length=2447bp
ACAACTAGAAGAGCCAGCGGAGCCACGAATGTGAAGCTCCTTGAGCTTCA
TCATCATGAACGCGTTTCTCAAAGCAAAGGGCAGCAACGAGGAGACGGCG
TCGGTAGGCGCGGCGGTTATTGTAACCGTAATTGAGGAGCTTTTGgtaag
taacttgccggccacacgacgtcagaagcgtcgtgtggttgtgtgtgtgt
gtgtgtggtggtggagcgctacgaggtgaaagtgctgcatgactcagaac
ccctccatcccagagagcgtccgctataattaccatcatcatgctcaaga
ccgttcgtgacccgcacacgcatgaaccaccactctgcaccgccagaaac
atcgcaacgacgggtagcgggacggcgtggcaacaattgctggattctcc
ctccactgagtcttatcttttggctctctccctctgtctttttcccttcc
cccgagcctgccagtcctccatgttttatatccacctgcctcggcgtacc
tcctcattcatcacttctgacttgtcttttgccccctactgcccacttca
gGGTCAACCCCTTCCCCAGCTGACTAAGCTTGGCACGACCACCGTCACCA
CCACTCCTCGTGCTTCCGCTTTTCCTCCCCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCCCCTCCT
CATCCTCTCTCCTCTCGCCTGCCTGGACCATGACATCCCCGGACATTTCG
AACGTCCTGCCCGTGTCATCTCCATCCTGAACGCCCTCAAGCAATACGCG
CCCCCTCTCTCCCTTCCTCCCACCTCTGGCGCTCCCCCCCTCCTTCCTCC
CTCCGCCTTCCTTCTCTCCAATGATGATTCCCCCCTCGCTACGCGCGAGC
AATTGACAAGGTTCCACTCTCTACAGCACATTGAAACTCTCTTCTCCCTG
TTTGCGCGATCCAAAGCCGCTGTGGAAGATGAAGGAGAAGAGGACGGCGA
GGAAGGGGGGAAGAAGGGAGGGAAGGAGGGAGGGAGGGCCAGGCGGGCCA
GTGAACGTGTCGGGCCTAAGAATTACAATGACAATGCCATCTTGGACATA
GATGCGGACACTTTCGTGTGCCCTGGCACGGAGGAAGCGGCCTTGCGCGC
AGCGGGAGCAGCGTGTAGGGGCGTCGATGAAGTCCTTGAGGGGAGGGCCG
AAACGGTTTTCTGTGTTGTTCGTCCCCCCGGCCACCATGCGACACCTGAC
AGGGCCATGGGATTTTGTTTCTTCAACAATGTAGGCGTGGCGGCCATGCA
TGCACGGGCGAAGCACGGGGTGAAACGGGTGGCGATCTTGGATCCAGgta
taaacaatcagggagggagggagggagggagggagggagggaatgggata
gccacatgtgaccgcgactacggatttacacgtcgcatcattgactcttc
cctccttcctatttttcttcctctcttccctccctccctccctctctccc
tccctccctcgctttctagACGTGCACCATGGCAACGGCACGCAGGATTT
CACCGTCCTCGATCCGGATCTTTTTTATGCCTCTACGCACGTCGGCTACG
GCTTCTACCCCGGTAGCGGGCACAAGGAGGAGGAGGAAGGGAGGGAAGGT
AGGCTCGTGAATGTACCTTTCAGGGAAGGGGAGGGGAGCAGCCAGCGCTT
TAGGCAGGCGTGGGAGAAGGAGATTTTCCCCACGTTGAAGGCGTTTGAGC
CGGAGTTGATCTTAATGTCGATGGGCTTCGACGCGGCGAGGGAGGACCCG
CTGGGGGAGATGGAGCTGGAGGCGAAGGATTACTGGTGGTTGACACGTGG
CGTGATGGAGGTGGCGAGGGAGGGGGGAAGGAGGGGGAGGGGGAGGGGGA
GGGGAGGAAATGTAAGGTGTTGTCGGTGTTGGAGGGAGGTTACCACCTGG
GGGCGCTGGGGCTGTGTGGAGTAGCCCATGTGAAGGCTTTACTGGGCTTG
CCGTTTGACGAGGGAGCGGGGGAGGAGACGGGGGAGGAGGAGGAGCCGTT
GGAGGCGTTGCACTTGTTGCCGCCAGTGGTGGATAGGGAGGAGGAGGAGC
TGCTGGAGCGGATGGCGGGGGTGTCGTTGGACGGGGGGAAGGAGAGGGGG
TGAATGATGAGAGAGAGAAGGAGACGTGCACGTGGCGCTTGCCAGGATAT
GAAGAGGAGAAACGAAAGGGAGGATAGGAAAGGAGGAAGACTAGAGATTG
GGAAAGGGGAGACGGAGGAGATGACTCCGGAGAGGAAGAGAAAAGGCTAG
GAAGATGACCATACGCAGCAAAGCAGGATTTATGCATGTTTTCATGTACA
TCCACACATATATATATGTACATGAGGCGCAATCCAAGCACGCATAGGTG
AAAACGTATAAAAGAAAGATGCACTTACGCACCAGCCCAATTAGGAA
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protein sequence of NO07G03880.2

>NO07G03880.2-protein ID=NO07G03880.2-protein|Name=NO07G03880.2|organism=Nannochloropsis oceanica|type=polypeptide|length=504bp
MLKTVRDPHTHEPPLCTARNIATTGSGTAWQQLLDSPSTESYLLALSLCL
FPFPRACQSSMFYIHLPRRTSSFITSDLSFAPYCPLQGQPLPQLTKLGTT
TVTTTPRASAFPPPPPPPPPPPPPPPPPPPPPPHPLLILSPLACLDHDIP
GHFERPARVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLA
TREQLTRFHSLQHIETLFSLFARSKAAVEDEGEEDGEEGGKKGGKEGGRA
RRASERVGPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLE
GRAETVFCVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAIL
DPDVHHGNGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVN
VPFREGEGSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEM
ELEAKDYWWLTRGVMEVAREGGRRGRGRGRGGNVRCCRCWREVTTWGRWG
CVE*
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protein sequence of NO07G03880.1

>NO07G03880.1-protein ID=NO07G03880.1-protein|Name=NO07G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MNAFLKAKGSNEETASVGAAVIVTVIEELLGQPLPQLTKLGTTTVTTTPR
ASAFPPPPPPPPPPPPPPPPPPPPPPHPLLILSPLACLDHDIPGHFERPA
RVISILNALKQYAPPLSLPPTSGAPPLLPPSAFLLSNDDSPLATREQLTR
FHSLQHIETLFSLFARSKAAVEDEGEEDGEEGGKKGGKEGGRARRASERV
GPKNYNDNAILDIDADTFVCPGTEEAALRAAGAACRGVDEVLEGRAETVF
CVVRPPGHHATPDRAMGFCFFNNVGVAAMHARAKHGVKRVAILDPDVHHG
NGTQDFTVLDPDLFYASTHVGYGFYPGSGHKEEEEGREGRLVNVPFREGE
GSSQRFRQAWEKEIFPTLKAFEPELILMSMGFDAAREDPLGEMELEAKDY
WWLTRGVMEVAREGGRRGRGRGRGGNVRCCRCWREVTTWGRWGCVE*
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