NO07G03590, NO07G03590 (gene) Nannochloropsis oceanica

Overview
NameNO07G03590
Unique NameNO07G03590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4443
Alignment locationchr7:990255..994697 -

Link to JBrowse

Properties
Property NameValue
Description4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:990255..994697 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0050992dimethylallyl diphosphate biosynthetic process
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00517454-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
GO:0046872metal ion binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR003451LytB/IspH
Homology
BLAST of NO07G03590 vs. NCBI_GenBank
Match: EWM26997.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nannochloropsis gaditana])

HSP 1 Score: 813.5 bits (2100), Expect = 3.400e-232
Identity = 412/478 (86.19%), Postives = 439/478 (91.84%), Query Frame = 0
Query:    1 MSRPSTPLPRAAMLALLWASLASAFHAPASPAGPGVWGLKRRAPSAAAL----HAAADG--AEAALSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRSLKGANAPKKDAVNA 473
            MS  S P+   A+LA+L  +  +AFH P+SP+ P +WG KR A SAAAL     AAADG   E  LSPKQERRRIIQSPNFHRQGFKAES GVESQMVSEFTSQLINEMKD++YT+QKGDLTIKLAKS+GFCWGV+RAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLA+M+IDFLPV  G+KQF+HIEK+DVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKW HEETIATASFADV+IIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNA+SEGFDPD DL KVGLANQTTMYKRETRAIG+LFEKTMMHKYGPAEVK+HYAEFDTICDATQERQDAIT+LMEE KLDFILIVGGFDSSNT HLKEIPHMQ+IPSFHIDRAERI+ADGSIEHREIDGSIV T NFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR+LKG  AP+KD VNA
Sbjct:    1 MSPRSMPVLLVAVLAVLCTASVTAFHTPSSPSAPSIWGAKRGAASAAALTRRHQAAADGEAVENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEE-KLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTLKGQEAPQKDTVNA 477          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: XP_005834226.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia theta CCMP2712] >EKX47246.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia theta CCMP2712])

HSP 1 Score: 535.0 bits (1377), Expect = 2.300e-148
Identity = 251/403 (62.28%), Postives = 317/403 (78.66%), Query Frame = 0
Query:   58 AALSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRSLK 461
            A L  + ERRRI+ S NF+R+GF      V+  MV EFTS ++ E+K+ +   ++ ++ IKLA+SYGFCWGV+RAVAMAYEAR+ + + +IHITNEIIHNPGVN RL +M  +F+PV GG K F  +++ DVV+LPAFGA+++EMQLLD KG +IVDTTCPWV+KVW AV+ HR+ + TSVIHGKWAHEE+IATAS AD +II+KD+ EA+YV NYI+NGG+K EFM KFKNA S GFDPD+DL KVG+ANQTTMYK ET AI +LFE+TM+ K+GP  V  H+   DTICDATQERQDAI +L+ +  +DF LIVGG+DSSNT HL EI HM     +HID A RI  DGSIEHRE DG+I VT +FLP G +T+GVTSGASTPD YLQE++ER+ +L++L+
Sbjct:   27 AKLDKRAERRRIVASENFNRRGFGETKEEVQGMMVEEFTSDMVKELKENNNVIERNNVVIKLAESYGFCWGVERAVAMAYEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPAFGASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMADTYIIIKDMEEAKYVTNYILNGGNKEEFMAKFKNACSSGFDPDRDLKKVGIANQTTMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFYLIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPKGKVTVGVTSGASTPDRYLQESVERVLMLKALE 429          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: CBN79017.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 516.9 bits (1330), Expect = 6.500e-143
Identity = 263/450 (58.44%), Postives = 335/450 (74.44%), Query Frame = 0
Query:   16 LLWASLASAFHAPASPAGPGVWGLKRRAPSAAALHAAADGAEAALSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQG-GEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVN-GGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDG-SIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRSLKGA 463
            L  A   +AF AP+ P        +R A S  ++ + AD     +  K  RR+I+QS +++R GFK E   V + M  EFTS +I+E K+   +  +GD T KLA+ YGFCWGV+RAVAMA++AR HFP++ +HITNE+IHNPGVNE+L EM ++F+PV   G K  + I+  DVVILPAFGA+++EMQ LD+K VQ+VDTTCPWV+KVW  V+KH K + TSVIHGKWAHEET+ATASF D +++VK++ EAEYV  YI N GGDKAEFMEKFKNAMSEGFDPD DLVKVGLANQTTMYKRETR IG+LFEKT+M KYGPAEV +H+  FDTICDATQERQDAI EL+EE ++D +L+VGG+DSSNT HL EI   + IP+F +++A  +  DGSI H +      + T NFLP G + IGVTSGASTPDAY+++A+E + +L+ L  A
Sbjct:    9 LAMAGSVAAFLAPSLPRHTNPAQCRRGATSKVSMSSTAD----VVDKKAARRKILQSDSYNRVGFKDEKEDVSALMSDEFTSDIISEFKENKGSITRGDTTFKLAEYYGFCWGVERAVAMAFQARKHFPDKTMHITNELIHNPGVNEKLDEMGVNFVPVSDKGGKDLETIDDGDVVILPAFGASLEEMQTLDEKNVQVVDTTCPWVSKVWNTVDKHTKAQFTSVIHGKWAHEETVATASFCDKYLVVKNMAEAEYVAAYIANGGGDKAEFMEKFKNAMSEGFDPDVDLVKVGLANQTTMYKRETRDIGKLFEKTLMEKYGPAEVGEHWMAFDTICDATQERQDAILELVEE-EIDLMLVVGGWDSSNTQHLAEISANKGIPTFWVNKANCVKPDGSIAHVDPHSMEELRTENFLPAGEIVIGVTSGASTPDAYMEQAVENISMLKKLAAA 453          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_095720176.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix elsteri] >PAX60322.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix elsteri CCALA 953])

HSP 1 Score: 501.5 bits (1290), Expect = 2.800e-138
Identity = 232/399 (58.15%), Postives = 316/399 (79.20%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRS 459
            +  K  +R + QS N+HR+ F    A V +Q+ SE+ S LI E++D +Y +++G++TI+LA+S+GFCWGV+RAVAMAYE R HFP ++I ITNEIIHNP VN+RL EM++ F+PV+ G K F  +   DVVILPAFGA++QEMQ+L++KG +IVDTTCPWV+KVW  VEKH+K+E TS+IHGK++HEET+AT+SFA +++IV ++ +AEYV NYI+NGGDK EFM KF  + S GF+PD DL +VG+ANQTTM K ET  IG+LFE+TMM KYGP E+  H+  F+TICDATQERQDA+ EL++E KLD +L++GGF+SSNT HL+EI    +IPS+HID  ERI ++  IEHRE++G + +T N+LP+G + +GVTSGASTPD  ++E IE++F L++
Sbjct:    1 MDTKAFKRSLQQSENYHRRSF-GHQAEVATQLKSEYQSNLIQEIRDRNYNFKRGNVTIQLAQSFGFCWGVERAVAMAYETRQHFPTEQIWITNEIIHNPSVNQRLREMEVKFIPVEAGNKDFSIVGSGDVVILPAFGASVQEMQILNEKGCKIVDTTCPWVSKVWNTVEKHKKVEFTSIIHGKYSHEETVATSSFAGIYLIVLNMQQAEYVANYILNGGDKNEFMAKFSKSHSAGFNPDVDLERVGIANQTTMLKGETEEIGKLFERTMMKKYGPQELNQHFQSFNTICDATQERQDAMFELVKE-KLDLMLVIGGFNSSNTTHLQEISEENHIPSYHIDCVERIKSENEIEHRELNGELQITENWLPEGEIVVGVTSGASTPDKVVEEIIEKIFELKA 397          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_073642573.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc calcicola] >OKH32212.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc calcicola FACHB-389])

HSP 1 Score: 501.1 bits (1289), Expect = 3.700e-138
Identity = 228/399 (57.14%), Postives = 318/399 (79.70%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRS 459
            +  K  +R +  S N++R+GF    A V SQ+ SE+ S LI E++D +YT Q+G++TI+LA+++GFCWGV+RAVAMAYE R HFP +RI ITNEIIHNP VN+R+ EM++ F+PV+  +K F  ++  DVVILPAFGA++QEMQ+L +KG +IVDTTCPWV+KVW  VEKH+K++ TS+IHGK+ HEET+AT+SFAD ++IV ++ EAEYV NYI+NGG++ EF++KF  A S GFDPD+DL +VG+ANQTTM K ET  IG+LFE+TM+ KYGP E+  H+  F+TICDATQERQDA+ EL+E+ KLD ++++GGF+SSNT  L++I   + IPS+HID  ERI +  SIEHR+++G +++T N+LPDG + +G+TSGASTPD  +++AIE++F L++
Sbjct:    1 MDTKAFKRTLQHSENYNRKGF-GHQAEVTSQLQSEYQSNLIQEIRDRNYTLQRGNVTIRLAQAFGFCWGVERAVAMAYETRQHFPTERIWITNEIIHNPSVNQRMQEMEVKFIPVEASQKDFSVVDIGDVVILPAFGASVQEMQILHEKGCKIVDTTCPWVSKVWNTVEKHKKVDYTSIIHGKYKHEETVATSSFADKYLIVLNLSEAEYVANYIINGGNREEFLKKFAKACSSGFDPDRDLERVGIANQTTMLKGETEQIGKLFERTMLQKYGPTELNQHFQSFNTICDATQERQDAMLELVED-KLDLMVVIGGFNSSNTTQLQQIAIEKKIPSYHIDTVERIQSANSIEHRQLNGQLIITENWLPDGEIVVGITSGASTPDKVVEDAIEKIFALKA 397          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_096620797.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. NIES-3974] >BAZ04431.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. NIES-3974])

HSP 1 Score: 500.0 bits (1286), Expect = 8.200e-138
Identity = 239/399 (59.90%), Postives = 311/399 (77.94%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRS 459
            +  K  +R +  S N+HR+GF    A V +Q+ SE+ S LI +++D +YT   GD+TI+LA+++GFCWGV+RAVAMAYE R HFP ++I ITNEIIHNP VN+RL EMD+ F+PVQ GEK F  I + DVVILPAFGA++QEMQLL+  G +IVDTTCPWV+KVW  VEKH+K + TS+IHGK+ HEETIAT+SFA  ++IV ++ +AEYV NYI+NGGDK EFMEKF  A S GFDPD DL ++G+ANQTTM K ET  IG+LFE+TMM KYGP  + +H+  F+TICDATQERQDA+ EL+E+ KLD +L+VGGF+SSNT HL+EI   + IPS+HID  ERI ++  IEHR +DGS+ +T N+LP G +T+GVTSGASTPD  +++AI ++  L+S
Sbjct:    1 MDTKAFKRSLQHSENYHRRGF-GHQAEVATQLQSEYQSGLIQQIRDRNYTLTIGDVTIRLAEAFGFCWGVERAVAMAYETRKHFPTEQIWITNEIIHNPSVNQRLREMDVKFIPVQAGEKDFSGISQGDVVILPAFGASVQEMQLLNDLGCKIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYNHEETIATSSFAGKYLIVLNMAQAEYVANYILNGGDKGEFMEKFGKACSTGFDPDVDLERLGIANQTTMLKGETELIGKLFERTMMQKYGPQSINEHFQSFNTICDATQERQDAMFELVEQ-KLDLMLVVGGFNSSNTAHLQEIAEEKGIPSYHIDSVERIKSERQIEHRLLDGSLHITENWLPSGKITLGVTSGASTPDKVVEDAIAKILELKS 397          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_096588109.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. NIES-2098] >BAY08549.1 hypothetical protein NIES2098_17090 [Calothrix sp. NIES-2098])

HSP 1 Score: 498.8 bits (1283), Expect = 1.800e-137
Identity = 231/399 (57.89%), Postives = 311/399 (77.94%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRS 459
            +  K  +R +  S N++R+GF    A V +Q+ SE+ S LI +++D +YT +KG++TI+LA+++GFCWGV+RAVAMAYE R HFP  RI ITNEIIHNP VN+R+ EM++ F+PV  G K F  +E  DVVILPAFGA++QEMQ+L  KG +IVDTTCPWV+KVW  VEKH+K++ TS+IHGK+ HEET+AT+SFA  ++IV ++ EAEYV NYI+NGGD+ EF++KF  A S GFDPDKDL +VG+ANQTTM K ET  IG+LFE+TMM KYGPAE+  H+  F+TICDATQERQDA+ EL++E  LD  +++GGF+SSNT  L++I   + IPS+HID  ERI +  SIEHR+++G IV+  N+LP+G + +GVTSGASTPD  +++ IER+F L++
Sbjct:    1 MDTKAFKRSLQHSENYNRKGF-GHQAEVATQLQSEYQSSLIQQIRDRNYTLEKGEVTIRLAQAFGFCWGVERAVAMAYETRQHFPSDRIWITNEIIHNPSVNQRMQEMEVKFIPVNAGNKDFSVVENGDVVILPAFGASVQEMQILHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNMKEAEYVSNYILNGGDREEFLQKFAKACSPGFDPDKDLERVGIANQTTMLKGETEQIGKLFERTMMQKYGPAEINQHFQSFNTICDATQERQDAMLELVQE-NLDLTIVIGGFNSSNTTQLQQIAFEREIPSYHIDSVERIKSAKSIEHRQLNGDIVIQDNWLPEGKIVVGVTSGASTPDKVVEDVIERIFALKA 397          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_104547378.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroococcidiopsis sp. TS-821] >PPS42661.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroococcidiopsis sp. TS-821])

HSP 1 Score: 498.0 bits (1281), Expect = 3.100e-137
Identity = 232/395 (58.73%), Postives = 307/395 (77.72%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLF 455
            +  K  +R +  S N+HR+GF    A V +Q+ SE+ S L+ E++D +YT Q+GD+TI LAK++GFCWGV+RAVAMAYE R HFP++RI ITNEIIHNP VN+RL EM + F+PV+ G+K F  +E  DVVILPAFGA++QEMQLL+ K   IVDTTCPWV+KVW  VEKH+K E TS+IHGK+ HEET+AT+SFA  ++IV ++ +AEYV NYI+NGGDK EF+ KF  A S GFDPD+DL +VG+ANQTTM K ET  IG+LFE+TM+ KYGP  + DH+  F+TICDATQERQDA+ EL+EE KLD ++++GGF+SSNT HL+EI   + IPS+HID A+RI     +EHR++ G +VVT N+LP+G + IG+TSGASTPD  + + ++++F
Sbjct:    1 MDTKAFKRSLQHSENYHRKGF-GHQAEVATQLQSEYQSNLVQEIRDNNYTLQRGDVTIYLAKAFGFCWGVERAVAMAYETRQHFPQERIWITNEIIHNPSVNQRLREMQVGFIPVENGKKDFSVVESGDVVILPAFGASVQEMQLLNDKSCTIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYNHEETLATSSFAGKYLIVLNLAQAEYVANYILNGGDKDEFLAKFSRACSAGFDPDRDLERVGIANQTTMLKSETEQIGKLFERTMLKKYGPTALNDHFQSFNTICDATQERQDAMFELVEE-KLDLMVVIGGFNSSNTTHLQEIAVEREIPSYHIDSADRIGPGNCVEHRQLSGELVVTENWLPEGAIAIGITSGASTPDKVVADVVQKIF 393          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_015129494.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. PCC 7507] >AFY33685.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. PCC 7507])

HSP 1 Score: 497.3 bits (1279), Expect = 5.300e-137
Identity = 233/399 (58.40%), Postives = 310/399 (77.69%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRS 459
            +  K  +R +  S N++R+GF    A V +Q+ SE+ S LI E++D +Y  Q+GD+TI+LA+++GFCWGV+RAVAMAYE R HFP  RI ITNEIIHNP VN+RL EM ++F+P  G  K F  +E  DVVILPAFGA++QEMQLL  KG +IVDTTCPWV+KVW  VEKH+K++ TS+IHGK+ HEET+AT+SFA  ++IV ++ EAEYV NYI+NGG++ EF+ KF  A S GFDPD+DL +VG+ANQTTM K ET  IG+LFE+TMM KYGP E+  H+  F+TICDATQERQDA+ EL+EE KLD ++++GGF+SSNT HL+EIP  + IPS+HID  ERI +  +IEHR++DG + +  N+LPDG + +GVTSGASTPD  +++ IE++F L++
Sbjct:    1 MDTKAFKRTLQHSDNYNRKGF-GHQAEVATQLQSEYQSNLIQEIRDRNYVLQQGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPSDRIWITNEIIHNPAVNQRLREMQVEFIPDDGKIKDFSVVESADVVILPAFGASVQEMQLLHDKGCKIVDTTCPWVSKVWNTVEKHKKIDYTSIIHGKYKHEETVATSSFAGKYLIVLNLEEAEYVSNYILNGGNREEFIAKFAKAYSAGFDPDRDLERVGIANQTTMLKGETEQIGKLFERTMMRKYGPDELNQHFQSFNTICDATQERQDAMFELVEE-KLDLMVVIGGFNSSNTTHLQEIPIQRGIPSYHIDCVERIKSAQAIEHRQLDGELAIAQNWLPDGKIIVGVTSGASTPDKVVEDVIEKIFALKA 397          
BLAST of NO07G03590 vs. NCBI_GenBank
Match: WP_102174231.1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella thermalis] >PLZ96526.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Fischerella thermalis CCMEE 5268])

HSP 1 Score: 496.1 bits (1276), Expect = 1.200e-136
Identity = 231/400 (57.75%), Postives = 313/400 (78.25%), Query Frame = 0
Query:   60 LSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLINEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIATASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKDLVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDATQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDRAERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRSL 460
            +  K  +R +  S N+HR+GF      V +Q+ SE+ SQLI ++++ +YT  +GD+TI+LAK++GFCWGV+RAVAMAYE R HFP +RI ITNEIIHNP VN+R+ EM+++F+PV  G+K F  +E  DVVILPAFGA++QEMQ+L+ KG +IVDTTCPWV+KVW  VEKH+K E TS+IHGK+ HEETIAT+SFA  ++IV ++ EAEYV NYI++GG++ EF+ KF  A S GFDPDKDL  +G+ANQTTM K ET  IG+LFE TMM KYGPA + DH+  F+TICDATQERQDA+ EL+E+ KLD ++++GGF+SSNT  L++I   + IPS+HID  +RI ++  IEHR ++G++ +T N+LPDG + IGVTSGASTPD  +++ IE++F L+S+
Sbjct:    1 MDTKAFKRSLQHSENYHRKGF-GHQEEVATQLQSEYQSQLIQQIRNNNYTLTRGDVTIRLAKAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMREMNVEFIPVTAGKKDFAIVETGDVVILPAFGASVQEMQILNDKGCKIVDTTCPWVSKVWNTVEKHKKREYTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAEYVANYILHGGNREEFLAKFSKACSAGFDPDKDLEMIGIANQTTMLKSETEQIGKLFEHTMMQKYGPANLNDHFQSFNTICDATQERQDAMLELVEQ-KLDLMIVIGGFNSSNTTQLQQIAFERGIPSYHIDSVDRILSENRIEHRLLNGNLEITNNWLPDGEIVIGVTSGASTPDKVVEDVIEKIFELKSI 398          
The following BLAST results are available for this feature:
BLAST of NO07G03590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26997.13.400e-23286.194-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
XP_005834226.12.300e-14862.284-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
CBN79017.16.500e-14358.444-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_095720176.12.800e-13858.154-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_073642573.13.700e-13857.144-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_096620797.18.200e-13859.904-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_096588109.11.800e-13757.894-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_104547378.13.100e-13758.734-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_015129494.15.300e-13758.404-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
WP_102174231.11.200e-13657.754-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000492NSK000492Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03590.1NO07G03590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581222gene_2697Nannochloropsis oceanica (N. oceanica CCMP1779)gene
IDSgene3537Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03590.1NO07G03590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03590 ID=NO07G03590|Name=NO07G03590|organism=Nannochloropsis oceanica|type=gene|length=4443bp
ATGGGATATCTGTTGAATAATTGTACTTTTGGCATTGTGTTCAACTTCAT
GACTTTGTGGGTTCATTTCTCTCCAACTACTTTCGGTCTTCATCCCTCGG
TGGGGCCGGGCAAAGGCTCGTGCCCTGTCTTGGCATGAGGTTCCGCTCCA
CCACCGTCTCCTTCAATGAATACCAGTAATCTTTCAAAATGTGATTATGG
TCAAACGACAACCTAATCAATTCTACATTCATCGCTTGCAAGGGAATCAC
AGACACGACCTTGGCGTCATCCCCCGCTTTGAATTTTCCGTGCACCTTCC
CCACAAATACAGCACTGGCGGTGTGTCGCCGATCGTCGCGTTCAGAGTGG
CTGTACACGCCAAGCAGACGGAGGGCGTTGAGTGAGGTAGTGCCGATCTC
TTCTTGGACTTTGCGGTTAACGGCTTCCTCCACGGTTTCGCCTGAGGGGG
AAATTGAAAGGGAGGTGCGGGAGGGAGGGAGGGGAGGGAAGGCAGTAAGG
AAAGAAAGTCACCCAACAGAGAGCCGCAACGTCGCCTTCTCCTTTTAAGA
CCACTAAACCTCCTTTCGGCACCCCTCCTACCCGTCCATATCCCCCTCCT
CTTTCCCTCCCTCTCCTCCCTCCTCCCAAATTCAAACTCACCGAGCTGTA
CAAAGCCACCCACACACGACATCCCTCTCCCATCCTTCCGCTTGATGAAT
ACCAACGCCGTCACTGGCTCATTCTCCTTCTCGCTGTACTCCAGAATCGT
GTCCACACCCAAAGAAGGTCCACACCAGCAGGAGTCGTCAACAGCTGAAC
AGAAACATGAGCCCTTGTGGGACGAGGAAGCGCCCTTAACCTGCCAGATG
AATGGGCCACGTTGCTTCCCTGCTGTGCGGAGGTGGCGAATGCTGATGAA
GAAGGCGTAGAATATCACACCTTGAAGGGAGAGGCGGGGGTTGGAAGTGA
GTGTGGAAGGGCTATAAAGCAACAAGACAGGAACCTTTCCCTCCGAATAT
GGGTGGGCATAAGAAGGCATGCCGCGGCCTGGACCTCACGGCCAAGCTTC
GGTTCCCACAATCAGTGCAATAGATCAAACAAGGGAAAAAATGCGCGCAC
ACGCAAGCTACGCATCCATCCCTCTTTCCTCGTAATCCCCATCCGCTTGG
GCGGCAATATCTCTCCCACTCTTTACTCAATTTCTTCCCCCTCCCACGTA
CCAGTATAAATAGGGTTGTTGAAAATAAAGCGAAGCAACGGATAGAAGGC
TTGTTTGAAACCCGGGATGGGTGGGCCCCGAGGAGTTTGCCTGGGGTGGT
AAACCAGGTCGTTCATGACTTAAGGCAGGGAGAGGAATGCTGCTGCTGCC
TCCTCTGCTGCTTTCCCTCTCCTTGCGAGGGATCATTCATGTGGGTGGTG
GATGGTTCAGCAAAGAGATGTCAGTGTGTGCAGGATATATGCGCAATGAG
CCAGGTCAAGAAATAGAGAAGTACGTTAATGCCCGCTCCAGGAAGGGCAA
GGCCGGGGCATAGCAGGGCAGCAGGCAGCAGCATCGTGCTCGAGTCGAGT
GCATGGGGGTATGAAACCCAGCGGCCACCAGTGCTGCCCGGCAGTATAGT
GCCCAAAAATTGTAATGCGTGTCTTTGCAGTGGAGGACCAAGGGCCACTT
TGATGTGAACATGCTTGAGCATGGCCGTGACGAGAACGTCGACGCTCTCT
AGGCTGTGATGCAAGAGGCCACAACAATCAACGAGTGTCCAAGATTTCGG
TTCACAAGTGACCTCGTTCCCCTTGGTTGGTCTTTCCTTTCCATCCTAAT
TCACAGTTCCAACAACACTGCGCACACCTCTATACAGCCCCCGCGCCGTC
CTTGCTGCAGTCGGCGTCTTGGTGCATCCAAGATGCCTGTCATTTTTTGC
GGAGGACTGCGGGCGACGCGGTCGTGTTTTCTTCCTTGGCTCCCTCCCCC
TTCATTTCTTCGCGGGCCCCCGCATCCCAAGCCCAACAACAAATTCACGA
TGAGGCCGGCGAGTCGTTAGGAGTGCAGATTATGTGGCTGCCGTTGTGAT
ACACATTCTGTAGCGAGGCGATGGTTGCATACAGCCGTGACGTTGCTGTG
TGCTTCTTTGTTCTGCTCTGCTCGTCCCAACCACCCTCACCCTAATCCAT
CCTCTCCTCCTCGACTTACACACCATCTCACAGACATCAATATGTCACGG
CCATCAACGCCCCTGCCGCGGGCGGCCATGCTGGCCTTGTTGTGGGCTTC
CCTTGCCTCCGCCTTCCACGCTCCTGCCTCCCCTGCCGGTCCTGGCGTCT
GGGGCTTGAAACGCCGCGCACCTTCTGCCGCTGCCCTTCACGCGGCGGCA
GATGGCGCCGAAGCTGCCTTGTCCCCGAAACAAGAACGTCGTCGCATCAT
TCAATCGCCCAACTTCCACCGACAAGGCTTCAAGGCGGAGAGTGCTGGGG
TGGAGTCTCAGATGGTCTCTGAGTTCACTTCTCAGCTCATTAACGAAATG
AAGGACACAAGCTACACCTACCAAAAAGGAGACCTCACTATCAAGCTTGC
CAAGAGCTACGGGTTCTGTTGGGGCGTGGACCGGGCAGTGGCGATGGCGT
ACGAGGCCCGCGCGCACTTTCCTGAGCAACGTATCCATATTACCAATGAG
ATCATCCACAACCCTGGGGTTAATGAACGCTTAGCTGAGATGGACATTGA
CTTCTTGCCCGTCCAGGGAGGGGAGAAACAATTCGATCATATCGAGAAGA
ATGACGTGGTAATTTTGCCGGCGTTTGGGGCGACGATTCAAGAGATGCAA
TTGCTTGATAAGAAAGGGGTGCAGATTGTGGACACGACCTGCCCGTGGGT
GGCGAAGGTTTGGACGGCGGTCGAGAAACATCGTAAGTTAGAGAGCACGA
GTGTGATCCATGGAAAATGGGCGCACGAGGAAACGATTGCCACGGCAAGC
TTTGCGGACGTGTTCATTATCGTGAAGGATATTCACGAAGCGGAGTACGT
TTGCAATTACATTGTCAATGGAGGAGATAAGGCGGAGTTTATGGAGAAAT
TTAAGAATGCCATGTCGGAGGGCTTTGACCCGGACAAGGATCTAGTTAAG
GTGGGGCTGGCGAACCAGACGACGATGTACAAGAGGGAGACTCGGGCGAT
CGGCCGGTTGTTTGAAAAGACGATGATGCACAAATATGGGCCCGCTGAGG
TGAAAGACCATTATGCCGAGTTTGATACGATTTGCGACGCGACCCAAGAG
AGACAGGATGCGATCACGGAGTTGATGGAGGAGCCAAAGTTGGACTTTAT
TTTGATCGTGGGTGGGTTTGATTCGAGTAACACGTGTCATTTGAAAGAGA
TCCCGCACATGCAGAACATCCCGAGCTTTCACATTGACAGGGCCGAACGG
ATCACGGCAGACGGGAGCATTGAGCACCGGGAAATTGATGGgtaatgtcc
ttcgtagtgatatgtccctttctccctcccagcctttcctccccctcttc
ctgtatttttggtttctgcttgctgcttgcaaggcgtttttaaattctaa
cttttcttctttttgtcccacacagATCCATTGTCGTGACACCCAACTTC
CTGCCTGATGGACCCTTGACCATCGGTGTGACCAGCGGCGCCTCCACCCC
TGACGCGTACCTGCAGGAGGCCATTGAGAGGCTGTTTCTACTGAGGTCCT
TGAAGGGGGCGAATGCGCCCAAGAAGGACGCGGTAAATGCTTAGATATCA
GTATTCCATGAAAAAGCCCAGGAAGGGAGAGAGAGAGATAAGAATGGTGG
TTTCCTATGTTGCAGGAGGAATCTATCGAGCGATCCTTGTCGAGGAGCGG
GTGGATGTGCCCCAGGCGGATTCTGTGAGTGGTGGGGTGCAGTGGAGGAT
GAGGAGGCGTAAGGGAGGGAGTTGGGGAGGAAAGGAGGGAGGAAGGACAT
TCGGGGGACGGAGTTCCATTGAAGATGGAGAGGTTTATGAATATTTGAGG
GGCATCTGCTCGATGATAGGAAGGTTGGAGGAGAATGAAAGAGGGAGGGT
GGTTTTGTAGCATATCGTTTCCCCCCCCCTACCATTGTTATGAAGGAGTG
ATTTGATGAGTGGTTTAGCCATGTCGTATTTGTCTGTGATATTGTTTTTT
CTTTTTAAATATACAGCCGCGCCAGTTTTATCGAGCCAGATGGGTCTGAT
AGTGCGCGCCTGTGTGCATGAATGTGTGCGCAGGTGCGTCAACGTTCAAA
ATTAGGCACGCGTGTACCGGCCCTTGCGTCCGTCTGTGCCTCAGGATGAT
AGTTACGAAATAGAGAAGAAGTAGGTGGTGGGAAGGGATGAAGAAAACAA
AGAAAAAAAATTTCACAAGAAGAATTGAGGAAATGCAAGAAGAAAAAGTG
GAGAAGGGAAACAGGAAAACGAGGCGGTAATGTGAGCCGATAC
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protein sequence of NO07G03590.1

>NO07G03590.1-protein ID=NO07G03590.1-protein|Name=NO07G03590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MSRPSTPLPRAAMLALLWASLASAFHAPASPAGPGVWGLKRRAPSAAALH
AAADGAEAALSPKQERRRIIQSPNFHRQGFKAESAGVESQMVSEFTSQLI
NEMKDTSYTYQKGDLTIKLAKSYGFCWGVDRAVAMAYEARAHFPEQRIHI
TNEIIHNPGVNERLAEMDIDFLPVQGGEKQFDHIEKNDVVILPAFGATIQ
EMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWAHEETIA
TASFADVFIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAMSEGFDPDKD
LVKVGLANQTTMYKRETRAIGRLFEKTMMHKYGPAEVKDHYAEFDTICDA
TQERQDAITELMEEPKLDFILIVGGFDSSNTCHLKEIPHMQNIPSFHIDR
AERITADGSIEHREIDGSIVVTPNFLPDGPLTIGVTSGASTPDAYLQEAI
ERLFLLRSLKGANAPKKDAVNA*
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Synonyms
Publications