NO07G03530, NO07G03530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03530 vs. NCBI_GenBank
Match: EWM27017.1 (nadh dehydrogenase iron-sulfur protein mitochondrial precursor [Nannochloropsis gaditana]) HSP 1 Score: 164.1 bits (414), Expect = 4.100e-37 Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0 Query: 64 MLRTTLTRQLATVGTVLRVRTATVNVAPAVVV----RALSFSPPSS--SNPSKSPYTHGAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHH 180 MLR ++TRQLATV T RV+ APA++ R S P SS SNPS SPYTHGAHRS+AEELVAQFPVTEVHGTVALCDGGGG MGHPIEYIQLNTVGEE++ CKYCGL+YKM+HH Sbjct: 1 MLRNSITRQLATVKTAFRVQRRV--HAPAIMSAPSRRCFSVPPSSSPPSNPSNSPYTHGAHRSNAEELVAQFPVTEVHGTVALCDGGGGGMGHPIEYIQLNTVGEEVATCKYCGLQYKMAHH 120
BLAST of NO07G03530 vs. NCBI_GenBank
Match: XP_009841219.1 (hypothetical protein H257_14968 [Aphanomyces astaci] >ETV69362.1 hypothetical protein H257_14968 [Aphanomyces astaci]) HSP 1 Score: 99.4 bits (246), Expect = 1.200e-17 Identity = 44/72 (61.11%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 110 KSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 K+P+ HRSDAE +AQ PV EV VA+CDGGGGA+GHP+EYI LN V ++ CKYCGLRYK HHH Sbjct: 45 KTPFEDTNRHRSDAELRIAQVPVVEVDSDVAVCDGGGGALGHPVEYIALNIVSDKPQTCKYCGLRYKQKHHH 116
BLAST of NO07G03530 vs. NCBI_GenBank
Match: XP_008874596.1 (hypothetical protein H310_10110 [Aphanomyces invadans] >ETV96819.1 hypothetical protein H310_10110 [Aphanomyces invadans]) HSP 1 Score: 96.7 bits (239), Expect = 8.000e-17 Identity = 49/99 (49.49%), Postives = 61/99 (61.62%), Query Frame = 0 Query: 83 RTATVNVAPAVVVRALSFSPPSSSNPSKSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 R A +AP + ++ K+P+ HRSDAE L+AQ PV EV VA+CDGGGGA+GHP+EYI LNTV ++ CKYCGLRYK HH Sbjct: 17 RAAVKAMAPRAFAAVQQAAGYATIYDLKTPFEDTNRHRSDAEILIAQVPVVEVDSDVAVCDGGGGALGHPLEYIALNTVSDKPQTCKYCGLRYKQKPHH 115
BLAST of NO07G03530 vs. NCBI_GenBank
Match: OQS06219.1 (hypothetical protein THRCLA_20420 [Thraustotheca clavata]) HSP 1 Score: 96.3 bits (238), Expect = 1.000e-16 Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0 Query: 118 HRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 H SDAE +AQ PV EV G A+CDGGGGA+GHP+EYI L+ V +E CKYCGLR+K SHHH Sbjct: 49 HHSDAEIRIAQVPVIEVDGDTAVCDGGGGALGHPLEYIALDIVSKEPQVCKYCGLRFKKSHHH 111
BLAST of NO07G03530 vs. NCBI_GenBank
Match: CBJ32168.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.4 bits (233), Expect = 4.000e-16 Identity = 50/105 (47.62%), Postives = 63/105 (60.00%), Query Frame = 0 Query: 77 GTVLRVRTATVNVAPAVVVRALSFSPPS--SSNPSKSPYTHGAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHH 180 G V VR A++ + A +P + S SKS Y HGAHRSDAE +A+ PV V G VALCDGGGGA+GHP++YIQL + C+YCG Y+M H Sbjct: 23 GAVAAVRPASIGLTTAASRPFSQLAPTTTFSKERSKSVYEHGAHRSDAEARIAKVPVVMVDGPVALCDGGGGALGHPLDYIQLGSPDGGPRACQYCGTLYQMKTH 127
BLAST of NO07G03530 vs. NCBI_GenBank
Match: XP_008609687.1 (hypothetical protein SDRG_05734 [Saprolegnia diclina VS20] >EQC36906.1 hypothetical protein SDRG_05734 [Saprolegnia diclina VS20]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 79 VLRVRTATVN-VAPAVVVRALSF----SPPSSSNPSKSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 VLRV A + VA VR+L+F + S+ ++P+ H SDAE +AQ PV EV G A+CDGGGGA+GHP+EYI L+ V E CKYCGLR+K HHH Sbjct: 7 VLRVLRAPMRFVAAPKAVRSLAFRSQVARMSTIYKGQTPFEDINRHHSDAEIRIAQVPVIEVDGDTAVCDGGGGALGHPLEYIALDIVSHEPQACKYCGLRFKKHHHH 114
BLAST of NO07G03530 vs. NCBI_GenBank
Match: GAX97793.1 (Hypothetical protein PINS_005636, partial [Pythium insidiosum]) HSP 1 Score: 92.8 bits (229), Expect = 1.200e-15 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 109 SKSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTV-GEEISECKYCGLRYKM-----SHHH 181 +K PY HRSDAE+ +AQ P+ +V G VA+CDGGGGA+GHP+EYIQL+TV E CKYCG+RY+ HHH Sbjct: 51 NKMPYEDVNRHRSDAEQRIAQVPIVDVEGDVAVCDGGGGALGHPLEYIQLDTVRHNEPQTCKYCGIRYRKKPGYHGHHH 129
BLAST of NO07G03530 vs. NCBI_GenBank
Match: XP_012196609.1 (hypothetical protein SPRG_02655 [Saprolegnia parasitica CBS 223.65] >KDO32963.1 hypothetical protein SPRG_02655 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 92.0 bits (227), Expect = 2.000e-15 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 79 VLRVRTATV-NVAPAVVVRALSF----SPPSSSNPSKSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 VLRV A + +VA VR+L F + S+ ++P+ H SDAE +AQ PV EV G A+CDGGGGA+GHP+EYI L+ V E CKYCGLR+K HHH Sbjct: 7 VLRVLRAPMRSVAAPKAVRSLVFRSQVARMSTIYKGQTPFEDINRHHSDAEIRIAQVPVIEVDGDTAVCDGGGGALGHPLEYIALDIVSHEPQACKYCGLRFKKHHHH 114
BLAST of NO07G03530 vs. NCBI_GenBank
Match: CCA27988.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 90.9 bits (224), Expect = 4.400e-15 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 99 SFSPPSSSNPSKSPYTHGAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGE-EISECKYCGLRYKM 177 SF+ + P H HRSDAE +AQ PV EV G +A+CDGGGGA+GHP+EYIQL+TV E CKYCG+RYKM Sbjct: 38 SFATIYDAKPRPDDTVH--HRSDAEIRIAQVPVVEVEGNLAVCDGGGGALGHPLEYIQLDTVERYEPQTCKYCGIRYKM 114
BLAST of NO07G03530 vs. NCBI_GenBank
Match: OQR99373.1 (hypothetical protein ACHHYP_06948 [Achlya hypogyna]) HSP 1 Score: 88.6 bits (218), Expect = 2.200e-14 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0 Query: 79 VLRVRTATVNVAPA-VVVRALSF----SPPSSSNPSKSPYTH-GAHRSDAEELVAQFPVTEVHGTVALCDGGGGAMGHPIEYIQLNTVGEEISECKYCGLRYKMSHHH 181 VLRV A + A A +R++ F + S+ ++P+ H SDAE +AQ PV EV A+CDGGGGA+GHP+EYI L+ V +E CKYCGLR+K +HHH Sbjct: 7 VLRVLRAPLRHAAAPKAIRSVVFRTQVANMSNIYKGQTPFEDINRHHSDAEIRIAQVPVIEVDSDTAVCDGGGGALGHPLEYIALDIVSQEPQACKYCGLRFKKAHHH 114 The following BLAST results are available for this feature:
BLAST of NO07G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03530 ID=NO07G03530|Name=NO07G03530|organism=Nannochloropsis oceanica|type=gene|length=543bpback to top protein sequence of NO07G03530.1 >NO07G03530.1-protein ID=NO07G03530.1-protein|Name=NO07G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bpback to top Synonyms
Publications
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