NO07G03290, NO07G03290 (gene) Nannochloropsis oceanica

Overview
NameNO07G03290
Unique NameNO07G03290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1567
Alignment locationchr7:908252..909818 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal large subunit pseudouridine synthase b
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:908252..909818 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016866intramolecular transferase activity
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom
IPR000748PsdUridine_synth_RsuA/RluB/E/F
IPR006145PsdUridine_synth_RsuA/RluD
IPR002942S4_RNA-bd
Homology
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_062305964.1 (rRNA pseudouridine synthase [Alicyclobacillus sendaiensis])

HSP 1 Score: 137.9 bits (346), Expect = 6.700e-29
Identity = 93/250 (37.20%), Postives = 138/250 (55.20%), Query Frame = 0
Query:  117 MFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHLPSTALLFVNQEPIR-PLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRLAKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGE 366
            M RL ++LA+ GV SR +   L+R G+V++    V +      PS   + V+  PI    P+++  NKP+   ST+ DP+GR  +   L P   +++ PVGRLD DT+GLLLF+ DG+LTQRLLHPS  +++ Y  +V       G  D+    + R  L +GVE  D        GV+   K E++   + DGE+      G+ V+ + + EG++R VRR+    G PVV L R+ +G V LG L  GE
Sbjct:    1 MERLQKVLAHAGVASRRKCEELIRAGRVSVDGQTVTELGAKVDPSRQRIAVDGVPIELEQPVVLVLNKPVAYLSTVSDPLGRRTVMQLLPPMRERVY-PVGRLDYDTSGLLLFTNDGELTQRLLHPSREIEKVYRVSV------RGIVDR----EARRALMEGVELED--------GVTAPAKVEVL--RQADGED------GVAVVHLAIHEGRNRQVRRMFERLGLPVVRLKRIAFGPVSLGHLKTGE 223          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_035002211.1 (rRNA pseudouridine synthase [Corynebacterium jeikeium])

HSP 1 Score: 136.7 bits (343), Expect = 1.500e-28
Identity = 99/278 (35.61%), Postives = 146/278 (52.52%), Query Frame = 0
Query:  101 ENKKRPATNQPKQKVEMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIRPLPLLVAY--NKPLGVHSTMGDPMGRPNLEDTLHPRLAK---LFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEIVEIDDA 373
            E +   A NQP  +    RL ++LA+ GV SR     L+  G+V + NGEV+      + PS  ++ V+ E ++    +V +  NKP GVHSTM D +GRP + D +  RL +   LFH VGRLDA T GLLL + DG+L  RL+HP   V++ Y+ATV LG+            KL   LK GVE  DGT  A+ + + +                     +G  ++++ + EG+  +VRR+L  AG+PV  L R +   V+LG+   G I  ++ A
Sbjct:   33 EQEAAAALNQPDSEKAQVRLQKVLASAGVASRRMSEKLIAAGRVEV-NGEVVVKMGTRIDPSVDIVRVDGERVQVNEEMVYFVLNKPRGVHSTMSDELGRPCVGDLVGTRLKEGQGLFH-VGRLDAATEGLLLLTNDGELANRLMHPKYEVRKTYMATV-LGEASR---------KLIRDLKDGVELDDGTARADSVQIVDV-------------------WQGKSLIKIELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQA 279          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_042212325.1 (rRNA pseudouridine synthase [Lysinimicrobium mangrovi] >SEI81158.1 23S rRNA pseudouridine2605 synthase [Lysinimicrobium mangrovi])

HSP 1 Score: 136.7 bits (343), Expect = 1.500e-28
Identity = 94/257 (36.58%), Postives = 137/257 (53.31%), Query Frame = 0
Query:  116 EMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIRPLP--LLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRLAKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEIVEI 370
            E  RL ++LA+ GVGSR +   L+ RG+V + +GEV+      + P   ++ V+ E I      L V  NKP GV STM DP GRP L+  +     +LFH VGRLDA+TTGLLL + DG+L  RL HP+  V + Y+A V    +G   K       +   LK+G+E  DG   A    V +  K                      +++V + EG++R+VRR+L   G+PV+ L R ++G + LG +A GE+ E+
Sbjct:   10 EGVRLQKVLASAGVGSRRKCEELIERGRVTV-DGEVVDQLGVRVDPEAVVIAVDGERISVAAGHLTVVLNKPFGVVSTMSDPQGRPALDQFVSQYQERLFH-VGRLDAETTGLLLLTNDGELANRLAHPTHGVSKVYVAKV----KGRVSK------HVTTQLKEGIELDDGPVRATACTVLDVAKDS-------------------SLVQVELHEGRNRIVRRMLDKVGHPVLELVRTQFGPLRLGTMAPGEVREL 235          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_034974260.1 (MULTISPECIES: rRNA pseudouridine synthase [Corynebacterium] >OFM59498.1 MFS transporter [Corynebacterium sp. HMSC058E07])

HSP 1 Score: 136.3 bits (342), Expect = 2.000e-28
Identity = 98/278 (35.25%), Postives = 146/278 (52.52%), Query Frame = 0
Query:  101 ENKKRPATNQPKQKVEMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIRPLPLLVAY--NKPLGVHSTMGDPMGRPNLEDTLHPRLAK---LFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEIVEIDDA 373
            E +   A NQP  +    RL ++LA+ GV SR     L+  G+V + NGE++      + PS  ++ V+ E ++    +V +  NKP GVHSTM D +GRP + D +  RL +   LFH VGRLDA T GLLL + DG+L  RL+HP   V++ Y+ATV LG+            KL   LK GVE  DGT  A+ + + +                     +G  ++++ + EG+  +VRR+L  AG+PV  L R +   V+LG+   G I  ++ A
Sbjct:   33 EQEAAAALNQPDSEKAQVRLQKVLASAGVASRRMSEKLIAAGRVEV-NGEIVVKMGTRIDPSVDIVRVDGERVQVNEEMVYFVLNKPRGVHSTMSDELGRPCVGDLVGTRLKEGQGLFH-VGRLDAATEGLLLLTNDGELANRLMHPKYEVRKTYMATV-LGEASR---------KLIRDLKDGVELDDGTARADSVQIVDV-------------------WQGKSLIKIELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQA 279          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_048543741.1 (rRNA pseudouridine synthase [Tetrasphaera jenkinsii])

HSP 1 Score: 136.3 bits (342), Expect = 2.000e-28
Identity = 92/268 (34.33%), Postives = 143/268 (53.36%), Query Frame = 0
Query:  105 RPATNQPKQKVEM-----FRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHLPSTALLFVNQEPIR--PLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRLAKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGE 366
            RP   +P + V++      RL +LLA  GVGSR +   L+  G+V + NG+++ +    +P  A++ V+ E ++  P  + +A+NKPLGV +TM D +GR N+ D +  R  +LFH VGRLDADT GLLL + DG+L  RL HP+  + + Y+A V     G   +D      L + L++GVE  DG    +   + +++                    G  ++ V + EG+  +VRR+L   G+PV  L R + G V LGD   G+
Sbjct:   41 RPPVERPGEAVDVHDPNGIRLQKLLAASGVGSRRKCEELIAEGRVEV-NGQIVLELGIRVPPGAIIHVDGERVQTDPERVYLAFNKPLGVVTTMNDELGRVNVGDYVAQRRERLFH-VGRLDADTEGLLLLTNDGELANRLQHPAYGILKTYVAQV----PGPIPRD------LGKQLREGVELDDGVVRVDSFKLVDSL-------------------PGKAIVEVVLHEGRKHIVRRMLEAVGHPVQALARTQVGPVRLGDTKPGK 277          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_009680700.1 (pseudouridine synthase [Gordonia neofelifaecis] >EGD53762.1 pseudouridine synthase [Gordonia neofelifaecis NRRL B-59395])

HSP 1 Score: 136.0 bits (341), Expect = 2.600e-28
Identity = 98/259 (37.84%), Postives = 135/259 (52.12%), Query Frame = 0
Query:  119 RLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVN--QEPIRPLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRL---AKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEIVEIDD 372
            RL ++LA  GV SR     L+  G+V + +GEV+ +    + P TA++ V+  +  I      +A NKP G HSTM D  GRP + D +  R+    +LFH VGRLDADT GLLL + DG+L  RL+HPS  V + YLATV  G+   G         L   L+QGVE  DG    +   + E                     +G  ++R+ + EG+ R+VRRLLA  G+PVVGL R   G V LG    G +  +D+
Sbjct:  123 RLQKVLAAAGVASRRGAEELIAAGRVEV-DGEVVVEQGLRIDPDTAIIKVDGARVVIDESKQYLALNKPKGWHSTMSDDQGRPCIGDIIAERVMAGQRLFH-VGRLDADTEGLLLLTNDGELAHRLMHPSYEVPKTYLATVR-GEVNRG---------LGRELRQGVELEDGPVAVDSFALLEV-------------------NQGKSLVRLTLHEGRKRVVRRLLAEVGFPVVGLVRTDIGPVTLGKQRPGSLRVLDN 350          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_034967688.1 (rRNA pseudouridine synthase [Corynebacterium jeikeium])

HSP 1 Score: 136.0 bits (341), Expect = 2.600e-28
Identity = 98/278 (35.25%), Postives = 146/278 (52.52%), Query Frame = 0
Query:  101 ENKKRPATNQPKQKVEMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIRPLPLLVAY--NKPLGVHSTMGDPMGRPNLEDTLHPRLAK---LFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEIVEIDDA 373
            E +   A NQP  +    RL ++LA+ GV SR     L+  G+V + NGE++      + PS  ++ V+ E ++    +V +  NKP GVHSTM D +GRP + D +  RL +   LFH VGRLDA T GLLL + DG+L  RL+HP   V++ Y+ATV LG+            KL   LK GVE  DGT  A+ + + +                     +G  ++++ + EG+  +VRR+L  AG+PV  L R +   V+LG+   G I  ++ A
Sbjct:   33 EQEAAAALNQPDSEKAKVRLQKVLASAGVASRRMSEKLIAAGRVEV-NGEIVVKMGTRIDPSVDIVRVDGERVQVNEEMVYFVLNKPRGVHSTMSDELGRPCVGDLVGTRLKEGQGLFH-VGRLDAATEGLLLLTNDGELANRLMHPKYEVRKTYMATV-LGEASR---------KLIRDLKDGVELDDGTARADSVQIVDV-------------------WQGKSLIKIELHEGRKHIVRRMLKEAGFPVQALVRTKIHTVQLGEQKPGTIRALNQA 279          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_076049452.1 (rRNA pseudouridine synthase [Mycobacterium heraklionense] >OMC08327.1 pseudouridine synthase [Mycobacterium heraklionense])

HSP 1 Score: 136.0 bits (341), Expect = 2.600e-28
Identity = 96/262 (36.64%), Postives = 143/262 (54.58%), Query Frame = 0
Query:  111 PKQKVEMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVN--QEPIRPLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRL---AKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGEI 367
            P ++ +  RL ++L+  GV SR     ++R G+V + +G+V+ +    + P+TA++ V+  +  +    + +A NKP GVHSTM D  GRP + D +  R+   AKLFH VGRLDADT GL+L + DG+L  RL+HPS  V + Y+ATV +G    G         L + L++GVE  DG    +   V +A+                    G  ++RV + EG+ R+VRR+LA  G+PV  L R   G VELG+   G I
Sbjct:    4 PGEEQDGVRLQKVLSQAGVASRRVAERMIRDGRVEV-DGQVVTELGTRVDPATAVIRVDGARVTVDDTRVYLALNKPRGVHSTMSDDRGRPCIGDYVEHRVRGDAKLFH-VGRLDADTEGLMLLTNDGELAHRLMHPSYQVPKTYIATV-IGTVPRG---------LGKKLREGVELDDGPAKVDDFAVVDAV-------------------PGKSMVRVTLHEGRKRIVRRMLAAVGFPVQELVRTDIGSVELGEQRPGSI 234          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_014464425.1 (rRNA pseudouridine synthase [Alicyclobacillus acidocaldarius] >AEJ43558.1 pseudouridine synthase [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1])

HSP 1 Score: 134.8 bits (338), Expect = 5.700e-28
Identity = 92/252 (36.51%), Postives = 142/252 (56.35%), Query Frame = 0
Query:  117 MFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIR-PLPLLVAYNKPLGVHSTMGDPMGRPNLEDTLHPRLAKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADG-TYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEGE 366
            M RL ++LA+ GV SR +   L+  G+V++ +GEV+      + PS   + V+  PI    P+++  NKP+   ST+ DP+GR  + + L P + +  +PVGRLD DT+GLLLF+ DG+LTQRLLHPS  +++ Y  +V       G  D+    + R  L +GVE  DG T PA +  + +A           DGE+      G+ V+ + + EG++R VRR+    G PV+ L R+ +G + LG L  G+
Sbjct:    1 MERLQKVLAHAGVASRRKCEELILAGRVSV-DGEVVTQLGAKVDPSRQRIAVDGVPIELEQPVVLVLNKPVAYLSTVSDPLGRRTVMELL-PPIRERVYPVGRLDYDTSGLLLFTNDGELTQRLLHPSREIEKVYRVSV------RGIVDR----ETRRALMEGVELEDGVTAPARVEVLRQA-----------DGED------GVAVVHLAIHEGRNRQVRRMFERLGLPVLRLKRIAFGPISLGHLKTGQ 223          
BLAST of NO07G03290 vs. NCBI_GenBank
Match: WP_017837673.1 (rRNA pseudouridine synthase [Dietzia sp. UCD-THP] >EYT61779.1 pseudouridine synthase [Dietzia sp. UCD-THP])

HSP 1 Score: 134.8 bits (338), Expect = 5.700e-28
Identity = 95/252 (37.70%), Postives = 138/252 (54.76%), Query Frame = 0
Query:  119 RLDRLLANRGVGSRTEVTVLVRRGKVALQNGEVIKDPKFHL-PSTALLFVNQEPIRPLPLLV--AYNKPLGVHSTMGDPMGRPNLEDTLHPRL---AKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYLATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKEIVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHRVRYGRVELGDLAEG 365
            RL ++LA  G+ SR     L+ RG+V + NG+++++    + P+TA++ V+   I     LV  A NKP G H+TM D MGRP + D +  R+    +LFH VGRLDADT GLLL + DG+L  RL+HPS  V + Y+ATV  G  G+G         + +TL++GVE  DG    +   V +                     +G  +++V + EG+  +VRRLL+  G+PV  L R R+G V LGD   G
Sbjct:   13 RLQKILAQAGIASRRASEDLIARGRVEV-NGKIVREMGVKVDPATAVIRVDGTRIVLDDNLVYLALNKPRGYHTTMSDDMGRPCVGDLVADRVDAGQRLFH-VGRLDADTEGLLLVTNDGELAHRLMHPSYEVSKTYMATV-TGVVGKG---------VGKTLREGVELEDGPAKVDQFSVLDV-------------------HEGRSLVKVVLHEGRKHIVRRLLSEVGHPVESLVRTRFGAVALGDQRAG 233          
The following BLAST results are available for this feature:
BLAST of NO07G03290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_062305964.16.700e-2937.20rRNA pseudouridine synthase [Alicyclobacillus send... [more]
WP_035002211.11.500e-2835.61rRNA pseudouridine synthase [Corynebacterium jeike... [more]
WP_042212325.11.500e-2836.58rRNA pseudouridine synthase [Lysinimicrobium mangr... [more]
WP_034974260.12.000e-2835.25MULTISPECIES: rRNA pseudouridine synthase [Coryneb... [more]
WP_048543741.12.000e-2834.33rRNA pseudouridine synthase [Tetrasphaera jenkinsi... [more]
WP_009680700.12.600e-2837.84pseudouridine synthase [Gordonia neofelifaecis] >E... [more]
WP_034967688.12.600e-2835.25rRNA pseudouridine synthase [Corynebacterium jeike... [more]
WP_076049452.12.600e-2836.64rRNA pseudouridine synthase [Mycobacterium herakli... [more]
WP_014464425.15.700e-2836.51rRNA pseudouridine synthase [Alicyclobacillus acid... [more]
WP_017837673.15.700e-2837.70rRNA pseudouridine synthase [Dietzia sp. UCD-THP] ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000530NSK000530Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03290.1NO07G03290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581108gene_2663Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g17gene3506Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03290.1NO07G03290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03290 ID=NO07G03290|Name=NO07G03290|organism=Nannochloropsis oceanica|type=gene|length=1567bp
ATGAGAAGCGGAGCGCAGCAGCAGCAAGGCCTCCTCGTTATTTACGTGCT
CCTTGGGGCGATGATGCTGGCATCAACCATGgtgcgtaattcttctaggg
attggaggtagtatagtgccgcacgtctgtggggcttatttgggccgaag
actgatcttgctcggggctcctatccccgttgatctcctttctcgttcgc
tcaaccctccccacccctctcaccttccctcctctattcaaccccttcct
gcagGCACTTTCATTGATTGGTACAGTCGCAAGAAGATCACACATAGCAT
TGACATCCGCCCTCTTCTTGCCTCCCTGTTCCTCCTCCATCTTCTACCAC
CCCACACGCCATGGCCACCAGCCTTCACAAGGCATCCGCACACGCAGCAC
CAGCAGTAGCGGTAGCAGTAGCAGCAGAAGTGGTAGCAGCAGACGTCATG
CCTGTGAGAAAGATGGCAGTGACGAGAACAAGAAGAGGCCTGCCACCAAT
CAGCCGAAGCAGAAGGTTGAAATGTTTCGTCTTGACCGACTTCTGGCCAA
CCGAGGGGTAGGCAGTCGGACGGAGGTCACGGTGTTGGTGCGTCGGGGAA
AAGTGGCATTACAGAATGGGGAGGTGATCAAgtacgttgaggaacgctga
ttgatgtggaaagagtgagaggagaagcgaattcgcatgcgcagacgaag
agactgtcctccttctcatttaaccccctctctgcagtagtcagtagaac
acctcttcagttccaatagacgctacagatatcaacttactttgtccact
ctttcactgccatactgcatcataattacctccccgtcttccatccctca
ttccctcccagAGACCCCAAGTTTCACCTTCCCTCCACCGCCCTTCTTTT
TGTCAACCAAGAGCCCATCCGCCCCCTCCCCCTCCTCGTCGCTTATAACA
AGCCTCTGGGCGTGCACTCCACAATGGGTGATCCTATGGGTCGCCCGAAT
CTTGAAGATACATTACATCCTCGTCTAGCCAAATTGTTTCATCCTGTCGG
CAGGCTTGACGCTGACACCACGGGCTTGCTTTTATTTTCAATCGATGGAC
AACTAACCCAGCGACTGTTACACCCCTCGGGAAACGTGCAGAGAGAATAT
CTGGCAACTGTCGAGTTGGGGGATGAGGGGGAGGGAGGGAAGGACAAGTT
TGACGAAGCAAAGCTGAGGGAGACGTTGAAGCAGGGAGTGGAAACAGCGG
ATGGCACATACCCTGCCGAATTGTTAGGGGTGTCGGAAGCGATTAAAAAA
GAGATAGTTGAAAAAGAGGAGGAGGATGGGGAGGAAGGAGGGGAGAAGAC
AAAAGGTCTACTTGTACTGCGTGTTGGCGTGTCGGAAGGGAAGCATCGGA
TGGTTCGTCGATTGCTTGCAAATGCGGGCTACCCTGTCGTAGGCTTGCAT
CGAGTAAGGTACGGTAGGGTAGAGTTGGGAGATTTGGCCGAGGGCGAAAT
CGTGGAGATAGATGATGCAAGTGACGTTGGACAGTGGGCTAGGCGGATGA
TGGAAGGGAAACATTAG
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protein sequence of NO07G03290.1

>NO07G03290.1-protein ID=NO07G03290.1-protein|Name=NO07G03290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MRSGAQQQQGLLVIYVLLGAMMLASTMALSLIGTVARRSHIALTSALFLP
PCSSSIFYHPTRHGHQPSQGIRTRSTSSSGSSSSRSGSSRRHACEKDGSD
ENKKRPATNQPKQKVEMFRLDRLLANRGVGSRTEVTVLVRRGKVALQNGE
VIKDPKFHLPSTALLFVNQEPIRPLPLLVAYNKPLGVHSTMGDPMGRPNL
EDTLHPRLAKLFHPVGRLDADTTGLLLFSIDGQLTQRLLHPSGNVQREYL
ATVELGDEGEGGKDKFDEAKLRETLKQGVETADGTYPAELLGVSEAIKKE
IVEKEEEDGEEGGEKTKGLLVLRVGVSEGKHRMVRRLLANAGYPVVGLHR
VRYGRVELGDLAEGEIVEIDDASDVGQWARRMMEGKH*
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Synonyms
Publications