NO07G03230, NO07G03230 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03230
Unique Name	NO07G03230
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1985
Alignment location	chr7:892994..894978 +

Link to JBrowse

Properties


Property Name	Value
Description	glutamine synthetase 2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:892994..894978 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0004356	glutamate-ammonia ligase activity
GO:0003824	catalytic activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006542	glutamine biosynthetic process
GO:0006807	nitrogen compound metabolic process
GO:0009987	cellular process
GO:0009058	biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR014746	Gln_synth/guanido_kin_cat_dom
IPR036651	Gln_synt_N
IPR008147	Gln_synt_beta
IPR008146	Gln_synth_cat_dom

Homology

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BLAST of NO07G03230 vs. NCBI_GenBank
Match: EWM27066.1 (glutamate ammonia ligase [Nannochloropsis gaditana])

HSP 1 Score: 677.6 bits (1747), Expect = 2.200e-191
Identity = 312/333 (93.69%), Postives = 326/333 (97.90%), Query Frame = 0

Query:    1 MSNSLFSQHTRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 334
            MSN+LFS HT+LSEEVFARFM+LPQG+AYQAEYIWIGG+GQDLRCKTRTLYK T+NPDDLP+WNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGG NILVMCDCYKPDMTPIK N+R+RCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCS+GTENA+GRHIAEAHYRACL+A I ISGINGEVLPGQWEYQVGPSVGI SGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMR+PGGFT+IIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG
Sbjct:    1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNNPDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDG 333

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BLAST of NO07G03230 vs. NCBI_GenBank
Match: CBJ30365.1 (Glutamate ammonia ligase [Ectocarpus siliculosus])

HSP 1 Score: 577.4 bits (1487), Expect = 3.100e-161
Identity = 264/363 (72.73%), Postives = 300/363 (82.64%), Query Frame = 0

Query:    1 MSNSLFSQHTRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTL------YKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIE 358
            M N+ FS HT LS+EV   F  LPQG    AEYIWIGGSGQDLRCKTRT       Y V     DLP WN+DGSSTGQAPG+DSEV++ PQA++PDPFRGG NI+V+CD Y+PD TP+  N+R  CA  M+K + LVPWFGIEQEYTLFEADGVTPFGWPK G+PG QGPYYCSIG ENA+GRHI EAHY+ACL+A + ISG NGEV+PGQWEYQVGP  GIASGD++W+SRY+LQRVCE FGVIVSLDPKPIPGDWNG+GCHTN+ST+PMR+ GG+  II A+EKL  +H EHIAAYGEGNERRLTGKHETASMD FSYGVANRGAS RI R  EK+  GYFEDRRPSSNMDPYVVTGM+++
Sbjct:    1 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVA----DLPKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: OQS00055.1 (glutamine synthetase [Thraustotheca clavata])

HSP 1 Score: 564.7 bits (1454), Expect = 2.100e-157
Identity = 254/352 (72.16%), Postives = 293/352 (83.24%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ ++M L  G   QAEYIW+GGSG+DLRCKTRTL K+  +P DLPIWNFDGSSTGQAPG+DSEV+LKP AI+ DPFR G +ILVMCDCYKPDMTPI +N+R  CA  MK  E  +PWFGIEQEYTLFEAD VTP+GWPKGG+PGAQGPYYC  G  +A+GR IA+AHYRACLYA I++SGIN EV+PGQWEYQVGP  GI +GDQ+W+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G GYFEDRRPSSNMDPYVVTG +++T  L
Sbjct:    2 SKLDRAVYDKYMELETGSFIQAEYIWVGGSGEDLRCKTRTLDKMPKSPADLPIWNFDGSSTGQAPGEDSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDCARVMKACEKEIPWFGIEQEYTLFEADKVTPYGWPKGGYPGAQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIDAGDQLWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMKKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRVAEAEGKGYFEDRRPSSNMDPYVVTGRIMKTISL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: ABA60428.1 (glutamine synthetase [Leptolegnia chapmanii])

HSP 1 Score: 558.5 bits (1438), Expect = 1.500e-155
Identity = 253/352 (71.88%), Postives = 291/352 (82.67%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ ++M L  G   QAEY+W+GGSG+DLRCKTRTL K  ++ ++LPIWNFDGSSTGQAPG DSEV+LKP AI+ DPFR G +ILVMCDCYKPDMTPI +N+R   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWPKGGFPG+QGPYYC  G  +A+GR IA+AHYRACLYA I+ SGIN EV+PGQWEYQVGP  GI +GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H EHIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG GYFEDRRP+SNMDPYVVTG +++T  L
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPASVEELPIWNFDGSSTGQAPGADSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPKGGFPGSQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRCSGINAEVMPGQWEYQVGPCTGIEAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMKHIIEALEKLKLKHKEHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASVRIPRTAEADGKGYFEDRRPASNMDPYVVTGRIMKTISL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: GAX97834.1 (glutamine synthetase [Pythium insidiosum])

HSP 1 Score: 557.4 bits (1435), Expect = 3.300e-155
Identity = 249/353 (70.54%), Postives = 295/353 (83.57%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQ-GDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ R+M++PQ  DA  AEY+WIGGSG+DLRCKTRTL KV ++  +LPIWNFDGSSTGQAPG+DSEVLL+P AIF DPFRGGKNILV+CDC KPDMTPI NN+RV CA  M    S  PWFGIEQEYTLFEAD  TP+GWPKGG+PG QGPYYC  G  +A+GR I +AHYRACLYA +++SGIN EV+PGQWEYQVGP  G+ +GD +W+SRYIL RVCE FGV VS DPKPIPGDWNG+GCHTN+ST+ MR+ GG  VII+A+EK++ +H  HIAAYG+GNERRLTG+HETAS+D+FSYGVANRGAS RIPR+AE DG GYFEDRRP+SNMDPYVVT  +++T  L
Sbjct:    2 SKLDRAVYDRYMAIPQPDDAILAEYVWIGGSGEDLRCKTRTLTKVPTSVSELPIWNFDGSSTGQAPGEDSEVLLRPAAIFKDPFRGGKNILVLCDCLKPDMTPIANNTRVDCARVMAAAASHKPWFGIEQEYTLFEADKTTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIVDAHYRACLYAGVKVSGINAEVMPGQWEYQVGPCEGMEAGDHLWISRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGQGNERRLTGRHETASIDTFSYGVANRGASIRIPRSAEADGKGYFEDRRPASNMDPYVVTARIVKTTIL 354

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: XP_008604411.1 (glutamine synthetase [Saprolegnia diclina VS20] >EQC41842.1 glutamine synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 556.6 bits (1433), Expect = 5.700e-155
Identity = 254/352 (72.16%), Postives = 288/352 (81.82%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ ++M L  G   QAEY+W+GGSG+DLRCKTRTL K  ++  DLPIWNFDGSSTGQAPG DSEV+LKP AI+ DPFR G +ILVMCDCYKPDMTPI +N+R   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP GG+PG QGPYYC  G  +A+GR IA+AHYRACLYA I+ISGIN EV+PGQWEYQVGP  GI SGDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG GYFEDRRPSSNMDPYVVTG +++T  L
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPTSVADLPIWNFDGSSTGQAPGQDSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPVGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRISGINAEVMPGQWEYQVGPCTGIESGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEADGKGYFEDRRPSSNMDPYVVTGRIMKTISL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: OQS01187.1 (glutamine synthetase [Achlya hypogyna])

HSP 1 Score: 556.2 bits (1432), Expect = 7.400e-155
Identity = 251/352 (71.31%), Postives = 290/352 (82.39%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ ++M L  G   QAEY+W+GGSG+DLRCKTRTL K  ++ ++LPIWNFDGSSTGQAPG DSEV+LKP AIF DPFR G +ILVMCDCYKPDMTPI +N+R   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP+GGFPG QGPYYC  G  +A+GR IA+AHYRACLYA I++SGIN EV+PGQWEYQVGP  GI +GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G GYFEDRRP+SNMDPYVVTG +++T  L
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLDKYPASVEELPIWNFDGSSTGQAPGQDSEVMLKPAAIFKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPRGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIDAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRTAEAEGKGYFEDRRPASNMDPYVVTGRIMKTISL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: XP_012196860.1 (glutamine synthetase [Saprolegnia parasitica CBS 223.65] >KDO32406.1 glutamine synthetase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 555.1 bits (1429), Expect = 1.600e-154
Identity = 252/352 (71.59%), Postives = 288/352 (81.82%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ ++M L  G   QAEY+W+GGSG+DLRCKTRTL K  ++  DLPIWNFDGSSTGQAPG DSEV+LKP AI+ DPFR G +ILVMCDCYKPDMTPI +N+R   A  MK  E  VPWFGIEQEYTLFEAD VTP+GWP GGFPG QGPYYC  G  +A+GR IA+AHYRACLYA I++SGIN EV+PGQWEYQVGP  GI +GDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIAAYG GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE DG GYFEDRRP+SNMDPYVVTG +++T  L
Sbjct:    2 SKLDRAVYDKYMELDTGSFIQAEYVWVGGSGEDLRCKTRTLEKYPASVADLPIWNFDGSSTGQAPGADSEVMLKPAAIYKDPFRRGNHILVMCDCYKPDMTPIPSNTRFDAARVMKACEKEVPWFGIEQEYTLFEADKVTPYGWPVGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGIRVSGINAEVMPGQWEYQVGPCTGIEAGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMVKIIEALEKLKLKHKVHIAAYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAESDGKGYFEDRRPASNMDPYVVTGRIMKTISL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: OQS03050.1 (glutamine synthetase [Thraustotheca clavata])

HSP 1 Score: 553.1 bits (1424), Expect = 6.300e-154
Identity = 249/352 (70.74%), Postives = 290/352 (82.39%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            + L   V+ ++M L  G+  QAEYIWIGGSG+DLRCKTRTL K  S+  DLPIWNFDGSSTGQAPG+DSEV+LKP AIF DPFRGG +ILV+CDCYKPDMTPI +N+R   A  M+  ++ VPWFGIEQEYTLFE D VTP+GWPKGG+PG QGPYYC  G  +A+GR IA+AHYRACLYA +++SGIN EV+PGQWEYQVGP  GI SGDQ+W+SRYI+ RVCE FGV VS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H  HIA YG+GNERRLTG+HETAS+D FSYGVANRGAS RIPR AE +G GYFEDRRP+SNMDPYVVTG +I+T  L
Sbjct:    2 SHLDRAVYDQYMKLDTGNYIQAEYIWIGGSGEDLRCKTRTLDKPPSSVADLPIWNFDGSSTGQAPGEDSEVMLKPAAIFKDPFRGGNHILVLCDCYKPDMTPIPSNTRSDAARVMEAAKAHVPWFGIEQEYTLFEKDQVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGVRVSGINAEVMPGQWEYQVGPCTGIESGDQLWISRYIMLRVCEDFGVFVSFDPKPIPGDWNGAGCHTNVSTKAMREAGGMAKIIEALEKLKLKHKVHIAVYGQGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEAEGKGYFEDRRPASNMDPYVVTGRIIKTIIL 353

[Close]

BLAST of NO07G03230 vs. NCBI_GenBank
Match: XP_009829319.1 (hypothetical protein H257_05979 [Aphanomyces astaci] >ETV81461.1 hypothetical protein H257_05979 [Aphanomyces astaci])

HSP 1 Score: 549.7 bits (1415), Expect = 6.900e-153
Identity = 252/352 (71.59%), Postives = 286/352 (81.25%), Query Frame = 0

Query:   10 TRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTLYKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILVMCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGEVLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYVVTGMLIETCCL 362
            ++L   V+ R+MSL  G + QAEYIWIGGSG+DLRCKTRTL K  ++  DLP WNFDGSST QAPG DSEVLLKP AI+ DPFRGGK+ILV+CDCYKPD TPI +N+R      M    S VPWFGIEQEYTLFEAD VTP+GWPK G+PG QGPYYC  G  +A+GR I +AHYRACLYA I+ISGIN EV+PGQWEYQVGP VGIASGDQMW+SRYIL RVCE FGVIVS DPKPIPGDWNG+GCHTN ST+ MR+ GG   II+ALEKL+ +H EHIAAYG GNERRLTG+HETAS+D FSYGVA+RGAS RIPR  E DG GYFEDRRP+SNMDPY VT  +++T  L
Sbjct:    2 SKLDRAVYDRYMSLDTGSSVQAEYIWIGGSGEDLRCKTRTLEKSPASVADLPDWNFDGSSTNQAPGQDSEVLLKPAAIYKDPFRGGKHILVLCDCYKPDGTPIPSNTRHDALRVMNASASHVPWFGIEQEYTLFEADKVTPYGWPKAGYPGPQGPYYCGAGAHSAFGRLIVDAHYRACLYAGIKISGINAEVMPGQWEYQVGPCVGIASGDQMWMSRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTQAMREEGGIAAIIEALEKLKLKHKEHIAAYGTGNERRLTGRHETASIDKFSYGVADRGASIRIPRTTEADGKGYFEDRRPASNMDPYTVTSRILKTIIL 353

The following BLAST results are available for this feature:

BLAST of NO07G03230 vs. NCBI_GenBank

BLAST of NO07G03230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27066.1	2.200e-191	93.69	glutamate ammonia ligase [Nannochloropsis gaditana...	[more]
CBJ30365.1	3.100e-161	72.73	Glutamate ammonia ligase [Ectocarpus siliculosus]	[more]
OQS00055.1	2.100e-157	72.16	glutamine synthetase [Thraustotheca clavata]	[more]
ABA60428.1	1.500e-155	71.88	glutamine synthetase [Leptolegnia chapmanii]	[more]
GAX97834.1	3.300e-155	70.54	glutamine synthetase [Pythium insidiosum]	[more]
XP_008604411.1	5.700e-155	72.16	glutamine synthetase [Saprolegnia diclina VS20] >E...	[more]
OQS01187.1	7.400e-155	71.31	glutamine synthetase [Achlya hypogyna]	[more]
XP_012196860.1	1.600e-154	71.59	glutamine synthetase [Saprolegnia parasitica CBS 2...	[more]
OQS03050.1	6.300e-154	70.74	glutamine synthetase [Thraustotheca clavata]	[more]
XP_009829319.1	6.900e-153	71.59	hypothetical protein H257_05979 [Aphanomyces astac...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR072	ncniR072	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000536	NSK000536	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03230.1	NO07G03230.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581084	gene_2656	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100056g25	gene3499	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03230.1	NO07G03230.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03230 ID=NO07G03230|Name=NO07G03230|organism=Nannochloropsis oceanica|type=gene|length=1985bp
ATGTCCAACTCGCTCTTCAGTCAACACACCCGCTTGTCGGAGGAGGTGTT
TGCCCGCTTCATGTCCCTTCCTCAGGGGGATGCCTACCAAGCCGAGTACA
TCTgtaagtccaagagaagggagtggacatcaccaggcacgaggcacgca
agaattgccgcggaagggtgtagggcgcggcacgcgcggcgcggcccaga
tatcttcatcattttttcagtcttgtcttatactctctcctctactacac
agGGATTGGTGGCTCTGGCCAAGACTTGCGCTGCAAGACCCGCACACTCT
ATAAGGTCACGAGCAACCCCGATGACCTgtaagtactgatcttgggagcg
aaatatcccccgcggatggattttttatgggcctttgtttggcaaggtgc
catttttgtatgcttgtgtcagttgtttagcttacatcttagtgtcatgc
atttgcgctgtatctttgcatcagccgcaacatgttggtctgtcgtgcgc
aaggcctacaaccgacctccgtgttcctcggagagcaaacacatgatctg
ctcctttttcgattcgcaccccattagccctttacttgccttgtgctgct
gtccttcatgccccagacaaccaccgtccacacccgtcatattcatccac
tgctccctcctttaactcccaacccccttcaatacgctcaaaattttatc
cgcccacttgtcccgctcacttttcctctctgaacccctccatagGCCCA
TTTGGAACTTCGACGGCTCCTCCACCGGCCAAGCTCCCGGGGACGACTCC
GAGGTACTCCTGAAGCCCCAGGCAATTTTCCCCGACCCCTTCCGTGGCGG
AAAGAACATCCTGGTCATGTGCGACTGCTACAAGCCCGACATGACCCCCA
TCAAGAACAACTCTCGTGTCCGGTGCGCGGAGGCGATGAAGAAGGTTGAA
TCCCTCGTCCCCTGGTTCGGCATCGAGCAAGAGTACACCCTGTTCGAGGC
GGATGGCGTGACGCCCTTCGGCTGGCCCAAGGGAGGTTTCCCCGGTGCCC
AGGgtatgtctaaaggatcagcgaggaagaagggagacagggagggaagg
cgggaggggttgttgtgacccttggcgccgactatcatcgactcatcttt
tctcccttataccacctttcccttatttcctccttccccaccagGCCCGT
ACTACTGCTCCATCGGGACTGAGAACGCCTACGGCCGCCACATCGCCGAG
GCTCACTACCGCGCCTGCCTCTATGCCAATATTCAGATCTCCGGGATCAA
CGGCGAGGTGCTCCCGGGCCAGTGGGAGTATCAGGTGGGCCCCTCCGTCG
GCATTGCATCAGGTGACCAGATGTGGGTCTCTCGTTACATCCTCCAGCGT
GTCTGCGAGGCCTTTGGCGTGATCGTATCTCTGGACCCCAAGCCCATCCC
GGGTGACTGGAACGGATCGGGGTGCCATACCAACTTCTCAACCGAGCCCA
TGCGACAACCCGGGGGGTTCACCGTCATTATCGACGCCTTGGAGAAGCTC
CGTGCCCGCCACGCCGAGCACATTGCCGCCTACGGGGAGGGGAACGAGCG
TCGTCTGACTGGAAAGCACGAGACGGCCAGCATGGACTCATTTTCCTATG
GCGTGGCCAACCGCGGGGCATCGTGCCGGATCCCCCGGGCGGCGGAGAAG
GATGGGgtaggttttactcaaaaattgggactatggagataagaagagag
agtatagatatgtgggccttgttgtatgacttttttttgtcttctttatc
ggatgggtatggctacttctctccctcatttttgctcttgagatatcagc
atctaatcctcccttccttcctccctctttccccgtacatcttgacagTG
CGGCTACTTCGAGGACAGGCGTCCGTCTTCCAACATGGACCCCTATGTCG
TCACGGGCATGCTTATTGAGACGTGCTGCTTGTAA

protein sequence of NO07G03230.1

>NO07G03230.1-protein ID=NO07G03230.1-protein|Name=NO07G03230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bp
MSNSLFSQHTRLSEEVFARFMSLPQGDAYQAEYIWIGGSGQDLRCKTRTL
YKVTSNPDDLPIWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGKNILV
MCDCYKPDMTPIKNNSRVRCAEAMKKVESLVPWFGIEQEYTLFEADGVTP
FGWPKGGFPGAQGPYYCSIGTENAYGRHIAEAHYRACLYANIQISGINGE
VLPGQWEYQVGPSVGIASGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGD
WNGSGCHTNFSTEPMRQPGGFTVIIDALEKLRARHAEHIAAYGEGNERRL
TGKHETASMDSFSYGVANRGASCRIPRAAEKDGCGYFEDRRPSSNMDPYV
VTGMLIETCCL*

Synonyms

Publications