NO07G02820, NO07G02820 (gene) Nannochloropsis oceanica

Overview
NameNO07G02820
Unique NameNO07G02820
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1080
Alignment locationchr7:800864..801943 +

Link to JBrowse

Properties
Property NameValue
DescriptionORF28R
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:800864..801943 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G02820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL094nonsL094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR133ngnoR133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02820.1NO07G02820.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02820.1NO07G02820.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02820 ID=NO07G02820|Name=NO07G02820|organism=Nannochloropsis oceanica|type=gene|length=1080bp
ATGCGCCACCGCCGCCACCAGATTGTGAGGGTGCACCAGCCTGAGAATTG
GGAGTTTTACCAGCGACAGCCTGCGCCTGAGAAACACCATCAGCTTGGGA
CACGGAACTACTACTATCACCACCCCAAGCTTGATTACCGCCACCACCCC
AAGCCTGATTACCACCCCAAGCCTGATTTCCACCACCGCCCTGATTTAAA
CCACTACCCGCAGCACCACCAGCACCAGCCTGACCATCACCACCGGCTTG
GTCGCCAGCACCAGCCTGACCACCACCACCCCAAGCCTGATTACCACCAC
CCCAGGCCTGATTACCACCACCGCCCTGATTTAAACCACTACCCGCAGCA
CTACCAGCACCAGCCTGACTACCACCACCGGCTTGGTCGCCAGCACCAGC
CTGACTACCACCACCCCAAGCCTGATTACCACCACCCCAAGCCTGATTTC
CACCACCGCCCTGATTTAAACCACTACCCGCAGCACTACCAGCACCAGCC
TGACTACCACCACCCCAAGCTTGATTACCACCACTACCCCAAGCCTGATT
ACCACCGCTGCCCTGATTTAAACCACTACCCGCAGCACTACCAGCACCAG
CCTGACCACCACCACCGGCTTGGTCGCCAGCACCAGCCTGACCACCACCA
CCCCAAGCTTGATTACCACCACTACCCCAAGCCTGATTACCACCGCTGCC
CTGATTTAAACCACTACCCGCAGCACTACCAGCACCAGCCTGACTACCAC
CACCGGCTTGGTTGCCAGCACCAGCCTGACCACCACCACCCCAAGCTTGA
TTACCACCACTACCCCAAGCCTGATTACCACCGCTGCCCTGATTTAAACC
ACTACCCGCAGCACCACCAGCACCAGCCTGACCACCACCACCGGCTTGGT
CGCCAGCACCAGCCTGACCACCACCACCCCAAGCTTGATTACCACCACTA
CCCCAAGCCTGATTACCACCGCTGCCCTGATTTAAACCACTACCCGCAGC
ACTACCAGCACCAGCCTGACTACCACCACCGGCTTGGTCGCCAGCACCAG
CCTGACCACCACCACCCCAAGCTTGATTAG
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protein sequence of NO07G02820.1

>NO07G02820.1-protein ID=NO07G02820.1-protein|Name=NO07G02820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MRHRRHQIVRVHQPENWEFYQRQPAPEKHHQLGTRNYYYHHPKLDYRHHP
KPDYHPKPDFHHRPDLNHYPQHHQHQPDHHHRLGRQHQPDHHHPKPDYHH
PRPDYHHRPDLNHYPQHYQHQPDYHHRLGRQHQPDYHHPKPDYHHPKPDF
HHRPDLNHYPQHYQHQPDYHHPKLDYHHYPKPDYHRCPDLNHYPQHYQHQ
PDHHHRLGRQHQPDHHHPKLDYHHYPKPDYHRCPDLNHYPQHYQHQPDYH
HRLGCQHQPDHHHPKLDYHHYPKPDYHRCPDLNHYPQHHQHQPDHHHRLG
RQHQPDHHHPKLDYHHYPKPDYHRCPDLNHYPQHYQHQPDYHHRLGRQHQ
PDHHHPKLD*
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Synonyms
Publications