NO07G02670, NO07G02670 (gene) Nannochloropsis oceanica

Overview
NameNO07G02670
Unique NameNO07G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1071
Alignment locationchr7:771583..772653 +

Link to JBrowse

Properties
Property NameValue
DescriptionNADH dehydrogenase (ubiquinone) complex I, assembly factor 6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:771583..772653 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR002060Squ/phyt_synthse
Homology
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_006859268.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Chrysochloris asiatica])

HSP 1 Score: 229.6 bits (584), Expect = 1.600e-56
Identity = 124/287 (43.21%), Postives = 181/287 (63.07%), Query Frame = 0
Query:   69 YCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            YC+EL+++ D++ YLC LL+P  SR A FALRAFNVE A +KD      + G MRMQ+W++ +  IYQD  P  PVA  L + ++ HNLT+RWL R+++ R ++LD+     + +LE YAE+T SSLLYL LE LGV++  ADHAASH+GKA GI T LRAT YH++++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+ GFD     L  ++ L   + L+  +WR++
Sbjct:   50 YCMELLRKRDYEGYLCSLLLPAESRSAAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKDTVEDIYQDSPPNQPVAIELWKVIKKHNLTKRWLLRIIDEREKNLDDKVYRNIQELETYAENTQSSLLYLILELLGVKNLHADHAASHIGKAQGIVTCLRATPYHSSRRKVFLPMDICMLHGVSQEDFLRKTQG----KNVRDVVYDIASQAHLHLKHARSFHKSVPVQA--------FPAFLQTVAVEDYLKKIQQVGFDIFHPTLQQKNAL-LPLSLYIQSWRKR 322          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_005362362.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Microtus ochrogaster])

HSP 1 Score: 229.2 bits (583), Expect = 2.000e-56
Identity = 134/331 (40.48%), Postives = 196/331 (59.21%), Query Frame = 0
Query:   25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            P  +  R R LP PS             S + +S    P +   YC+EL+++ D+++YLC LL P   R +  ALRAFNVE A +KD     A+ G MRMQ+WR+ +  IY+D  P  PVA  L +AV+ HNLTRRWL R+++ R ++LD+    ++ +LE+YAE+T SSLLYLTLE LGV+   ADHAASH+GKA GI T LRAT YH +++ +++P+++  +  V+  D LR  +     + + DV ++VA+QAH HL+HAR    S P+ A        F A L  V    YL+ +Q+  FD     L  ++ L   + L+  +WR++
Sbjct:   26 PRDVWDRVRRLPGPS---------AVRRSVAAASGPGIPGS-DHYCLELLRKRDYESYLCSLLFPAECRSSVSALRAFNVELAQVKDSVSEKAI-GLMRMQFWRKAVEDIYRDNPPHQPVAAELWKAVKRHNLTRRWLMRIIDEREKNLDDKAYRSIQELENYAENTQSSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDVCVQHGVSQEDFLRRSRD----KNVRDVIYDVASQAHSHLKHARSFHRSVPAEA--------FPAFLQTVTLEDYLKKIQRVDFDIFHPSLQQKNTL-LPLSLYIQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_006916736.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Pteropus alecto])

HSP 1 Score: 229.2 bits (583), Expect = 2.000e-56
Identity = 136/335 (40.60%), Postives = 196/335 (58.51%), Query Frame = 0
Query:   21 CPTHPTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            C   P  L +R R LP        GP     S  + S   A   +  +YC+EL+++ D+++YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LGV+   ADHAASH+GKA GI T LRAT YH  ++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+  FD     L  R+ L   + L+  +WR++
Sbjct:   22 CRRPPRGLWARVRRLPG-----FQGPAGSGRSVAAASGPGASGTD--QYCMELLRKRDYESYLCSLLLPAQSRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYHNIQELENYAENTQSSLLYLTLEILGVKDLHADHAASHIGKAQGIVTCLRATPYHGTRRRVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVALEDYLKKIQQVDFDIFHPSLQQRNTL-LPLFLYVQSWRKR 335          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_003479971.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Cavia porcellus])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 129/303 (42.57%), Postives = 186/303 (61.39%), Query Frame = 0
Query:   53 STSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            S + +S A  P     YC+EL+++ D+++YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+WR+ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LGV+   ADHAASH+GKA GI T LRAT YH  ++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+  FD     L  R+ L   + L+  +WR++
Sbjct:   45 SVAAASGAGGPGT-AAYCMELLRKRDYESYLCTLLLPAESRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWRKTVEDIYCDNPPHQPVATELWKAVRRHNLTKRWLMKIIDEREKNLDDKPYRNIQELENYAENTQSSLLYLTLEILGVKDLHADHAASHIGKAQGIVTCLRATPYHGGRRRVFLPMDICMLHGVSQEDFLRRNQD----RHVRDVVYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVSLEDYLKRIQRVDFDIFHPSLERRNTL-LPLSLYIQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_019734325.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Hippocampus comes])

HSP 1 Score: 228.8 bits (582), Expect = 2.700e-56
Identity = 126/303 (41.58%), Postives = 188/303 (62.05%), Query Frame = 0
Query:   52 SSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355
            S  + +S  AD  +   +C+ELV+  D++ ++C LL+P  +RR+  ALRAFNVE A +KD     +L G MRMQ+W+  I  IY+DK P  PV+  L  AV+ HNLT+RWL R++  R +DLD+     + +LE YAE+T SSLL+L LESLGV+   ADHAASHVGKA GI T LRAT +H++++ +Y+P+++      +  D +R  Q     Q++ DV +++A+QAH+HLEHAR    S P+ AT          +L  V    +L+ L+K+ FD     L  R+ L   ++L+  +W++
Sbjct:   42 SVRAAASATADVQHNERFCLELVRSRDYEGFVCSLLLPEAARRSALALRAFNVELAQVKDSVSQKSL-GLMRMQFWKTAIEEIYRDKPPNQPVSVELWRAVKKHNLTKRWLTRIITEREKDLDDRGYRNLQELESYAENTQSSLLFLLLESLGVKDVHADHAASHVGKAHGIVTCLRATPHHSSRRKVYLPMDICMLHGASQEDFIRRSQE----QSIRDVVYDIASQAHVHLEHARSFGPSVPAAAT--------PEMLERVALEDFLQRLRKADFDIFHPSLQKRNPL-LAIQLYLRSWKK 330          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: NP_001180807.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Macaca mulatta] >XP_005563795.1 PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Macaca fascicularis] >XP_015001135.1 PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Macaca mulatta])

HSP 1 Score: 228.4 bits (581), Expect = 3.500e-56
Identity = 131/337 (38.87%), Postives = 198/337 (58.75%), Query Frame = 0
Query:   21 CPTHPTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYG--EYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            C   P  L +R R LP P              S  + + A+ P  +G   YC+EL+++ D++ YLC LL+P  SR + FALRAFNVE A +KD      + G MR+Q+W++ +  IY DK P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++     V+  D LR  +     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    +L+ +++  FD     L  ++ L   + L+  +WR++
Sbjct:   22 CRRPPLGLYARVRRLPGPE------------VSGRSVAAASGPGTWGTDHYCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTI-GLMRIQFWKKTVEDIYCDKPPQQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDVHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNRD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVSLEDFLKKIRRVDFDIFHPSLQQKNTL-LPLYLYMQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_006974990.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Peromyscus maniculatus bairdii])

HSP 1 Score: 228.4 bits (581), Expect = 3.500e-56
Identity = 133/331 (40.18%), Postives = 195/331 (58.91%), Query Frame = 0
Query:   25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            P  +  R R LP PS             S + +S    P +   YC+EL+++ D+++YLC LLVPT  R +  ALRAFNVE A +KD      + G MRMQ+W++ +  +Y+D  P  PVA  L +AV+ HNLT+RWL R+++ R ++LD+    ++ +LEDYAE T S LLYLTLE LGV+   ADHAASH+GKA GI T LRA  YH +++ +++P+++  +  V+  D LR  Q     + + DV + +A+QAHLHL+HAR L  S P+ A        F A L  V    YL+ +Q+  FD     L  ++ L   + L+  +WR++
Sbjct:   26 PRDVWERVRRLPGPS---------AVRRSVAAASGPGIPGS-DHYCLELLRKRDYESYLCSLLVPTECRSSVSALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKAVEDMYRDNPPHQPVAVELWKAVKRHNLTKRWLMRIIDERERNLDDKAYRSVRELEDYAEGTQSCLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRAAPYHGSRRKVFLPMDVCVQHGVSQEDFLRRKQD----KNVRDVIYNIASQAHLHLKHARSLHRSVPAKA--------FPAFLQTVTLEDYLKKIQRVDFDIFHPSLQKKNTL-LPLSLYIQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_004047367.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Gorilla gorilla gorilla])

HSP 1 Score: 228.0 bits (580), Expect = 4.500e-56
Identity = 133/336 (39.58%), Postives = 196/336 (58.33%), Query Frame = 0
Query:   21 CPTHPTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYG--EYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355
            C   P  L +R R LP P              S  + + A+ P  +G   YC+EL+++ D++ YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    +L+ +Q+  FD     L  ++ L   + L+  +WR+
Sbjct:   22 CRRPPLGLYARVRRLPGPE------------VSGRSVAAASGPGAWGTDHYCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVSLEDFLKKIQRVDFDIFHPSLQQKNTL-LPLYLYIQSWRK 331          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_006209740.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Vicugna pacos])

HSP 1 Score: 228.0 bits (580), Expect = 4.500e-56
Identity = 137/344 (39.83%), Postives = 197/344 (57.27%), Query Frame = 0
Query:   15 IAAKSLCPTHPTH-LSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYG--EYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            +    LC   P   L  R R LP P+             S  + + A+ P   G   YC+EL+++ D++ YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LEDY E+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++     V+  D LR  Q     + + DV ++VA+QAHLHL+HAR    S P  A        F A L  V    YL+ +QK  FD     L  ++ L   + L+  +WR++
Sbjct:   15 LGVPGLCSRRPPQGLWIRARRLPEPA------------GSGRSVAAASGPGASGTDRYCLELLRKRDYEGYLCSLLLPAESRGSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYCDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKPYRNIQELEDYGENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDVCVLHGVSQEDFLRKSQD----KNVRDVVYDVASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVALEDYLKKIQKVDFDIFHPSLQQKNAL-LPLSLYIQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_021077970.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Mus pahari])

HSP 1 Score: 228.0 bits (580), Expect = 4.500e-56
Identity = 132/331 (39.88%), Postives = 199/331 (60.12%), Query Frame = 0
Query:   25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            P     R R LP PS          +  S + +S    P ++  YC+EL+++ D+++YLC LL PT  +R+  ALRAFNVE A +KD      + G MRMQ+W++ +  +Y D  P  PVA  L +AV+ HNLT+RWL R+++ R ++LD+    ++ +LE+YAE+T SSLLYLTLE LGV+   ADHAASH+GKA GI T LRAT YH++++ +++P+++  +  V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P+ A        F A L  V    YL+ +Q+  FD     L  ++ L   + L+  +WR++
Sbjct:   26 PRDAWERVRRLPGPS---------AFRRSVAAASGPGIPGSH-LYCLELLRKRDYESYLCSLLFPTECQRSASALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKAVEDMYCDNPPQQPVAIELWKAVKKHNLTKRWLMRIIDEREKNLDDKAYRSIQELENYAENTQSSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDFLRRNQD----KNVRDVVYDIASQAHLHLKHARSFHRSVPAEA--------FPAFLQTVSLEDYLKKIQRVDFDIFHPSLQQKNTL-LPLSLYIQSWRKR 332          
The following BLAST results are available for this feature:
BLAST of NO07G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_006859268.11.600e-5643.21PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_005362362.12.000e-5640.48PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_006916736.12.000e-5640.60PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_003479971.12.700e-5642.57NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
XP_019734325.12.700e-5641.58PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
NP_001180807.13.500e-5638.87NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
XP_006974990.13.500e-5640.18PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_004047367.14.500e-5639.58PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_006209740.14.500e-5639.83PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_021077970.14.500e-5639.88NADH dehydrogenase (ubiquinone) complex I, assembl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL094nonsL094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR133ngnoR133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000572NSK000572Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02670.1NO07G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580874gene_2598Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100046g44gene3463Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02670.1NO07G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02670 ID=NO07G02670|Name=NO07G02670|organism=Nannochloropsis oceanica|type=gene|length=1071bp
ATGTCTCCGCGGTCATCCGTCGCCTATTTTCGGGCCGCCGCCATCGCCGC
CAAATCCCTCTGTCCCACACATCCCACACACTTGTCCTCTCGAACACGAA
ACCTCCCCTCTCCATCTCATCGACCTCACCCCGGACCGCGGCCGTACTAT
CTCTCCTCTACCTCCACGTCCTCCACTGCCGCAGACCCTGCCAATTACGG
CGAATACTGTGTTGAGCTGGTCAAGCAGCACGATTTTGACGCCTATTTGT
GTGGCCTCCTTGTGCCCACCCCCTCCCGACGGGCCTTTTTTGCCCTCCGT
GCGTTCAACGTTGAAACGGCGCTCATCAAGGACGTGGCCCGCGGCAATGC
ACTGCCGGGGCAAATGCGTATGCAATGGTGGCGGGAAGTCATCGGTGCTA
TCTACCAAGATAAATCCCCTGCGCACCCTGTCGCCCGTGCCTTGGCAGAA
GCCGTACAAGCCCACAACCTCACCCGGAGGTGGCTCGACCGTCTCCTCGA
AGCTCGCCTCCAAGATCTAGATAACATCCAACCCACAACCATGGCCGATC
TGGAGGACTACGCCGAGCACACTGCCTCCTCCCTCCTCTACCTTACCCTT
GAAAGCCTCGGCGTGCAGCACCAAACGGCGGATCACGCTGCAAGTCACGT
AGGCAAAGCCACAGGCATCACCACCTTGCTACGTGCAACCAGATACCACG
CCGCCCAACAGTCCCTCTACATCCCTCTGGAGCTCCAAAGAGAATTTAAA
GTGAACGTAAACGATATTCTGAGAGGGCCTCAAAGCCCCGAGGCTGTCCA
AGCCTTATCCGACGTATTTTTTGAGGTAGCAACCCAGGCACATTTACACC
TGGAGCACGCAAGAGAGTTGCTTTCTTCTACCCCCTCTCCGGCGACGGGA
CCATTGCCAAAGGCAACGTTTACGGCGTTACTACCGGCTGTGAGGACGAC
AATGTACCTGGAGGCGTTGCAGAAAAGTGGGTTTGACGCTCTGGATGAGG
GATTGTTGCCACGAAGTCATCTAGGATTTCAAATGCGGTTGTGGTGGGCG
AACTGGAGGCGGAAAATTTAG
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protein sequence of NO07G02670.1

>NO07G02670.1-protein ID=NO07G02670.1-protein|Name=NO07G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MSPRSSVAYFRAAAIAAKSLCPTHPTHLSSRTRNLPSPSHRPHPGPRPYY
LSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALR
AFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAE
AVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTL
ESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFK
VNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATG
PLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWA
NWRRKI*
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Synonyms
Publications