NO07G02670, NO07G02670 (gene) Nannochloropsis oceanica

Overview
NameNO07G02670
Unique NameNO07G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1071
Alignment locationchr7:771583..772653 +

Link to JBrowse

Properties
Property NameValue
DescriptionNADH dehydrogenase (ubiquinone) complex I, assembly factor 6
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:771583..772653 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR002060Squ/phyt_synthse
Homology
BLAST of NO07G02670 vs. NCBI_GenBank
Match: EWM27096.1 (isoprenoid biosynthesis enzyme [Nannochloropsis gaditana])

HSP 1 Score: 510.8 bits (1314), Expect = 3.500e-141
Identity = 248/306 (81.05%), Postives = 278/306 (90.85%), Query Frame = 0
Query:   51 LSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRKI 357
            L++ ST S+  DPAN+G+YCVELVKQHDFDAYLCGLLVP  SRRA+FALRAFNVETALIKDVARGNALPGQMRMQWWREVI  IYQ KSPAHPVARAL EAVQAHNLTRRWLDRLLEAR  DL NIQPT M +LEDYAE+TASSLLYLTLE+L V+H TADHAASHVG+ATGI T+LRAT++HA+ QSLY+PLE+QREFKVNVNDILRGP+SPEA QALSD+FFEVATQAHLH+EHARE+L+S P  ++GPLP+ T TALLPAVRTTMYL+ALQK+GF+ALD+ LLPRSHL FQ+RLWWANWR KI
Sbjct:   36 LAAFSTKSSGPDPANHGQYCVELVKQHDFDAYLCGLLVPRSSRRAYFALRAFNVETALIKDVARGNALPGQMRMQWWREVISGIYQGKSPAHPVARALCEAVQAHNLTRRWLDRLLEAREGDLGNIQPTRMEELEDYAENTASSLLYLTLEALHVRHPTADHAASHVGRATGIATVLRATKFHASHQSLYVPLEIQREFKVNVNDILRGPESPEAAQALSDMFFEVATQAHLHMEHAREMLASPPPSSSGPLPRNTITALLPAVRTTMYLKALQKNGFNALDQDLLPRSHLEFQLRLWWANWRGKI 341          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: CBJ31125.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 239.6 bits (610), Expect = 1.500e-59
Identity = 136/298 (45.64%), Postives = 176/298 (59.06%), Query Frame = 0
Query:   69 YCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAV--QAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQ------HQTADHAASHVGKATGITTLLRATRYH-----------AAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRL 348
            +C ++VK+ D+D YL  LL     R A  A+RAFNVETA IKD  RGN +PG+MRMQWW++ +  ++  + P  PVA ALAE V  Q   LTRRW DR+L+AR+ DLD  QP T+ ++E YAE+TASSLLYL+LE  GV+           HAA HVGKA GI TLLR+                  +S  +P ++ R F +    + RGPQ  +   AL++  F VA+ A  H+E A E L++      G LP   F ALLP VR   YLE LQ  GF+A DE L P+S   FQ+RL
Sbjct:   17 HCSDVVKRGDYDGYLYSLLQGAQLRPASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVFVGEPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRL 314          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_005328725.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Ictidomys tridecemlineatus])

HSP 1 Score: 233.0 bits (593), Expect = 1.400e-57
Identity = 130/311 (41.80%), Postives = 191/311 (61.41%), Query Frame = 0
Query:   44 PGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355
            PGP     S  +TS       ++  YC+EL+++ D++ YLC LL+P  SR + FALRAFNVE A IKD     A+ G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++  +  V+  D LR  Q+    + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+  FD     L  ++ L   + L+  +WR+
Sbjct:   38 PGPAVTRRSVVATSGPGVSGTDH--YCLELLRKRDYETYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKAI-GLMRMQFWKKTVEEIYHDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMQHGVSQEDFLRRNQN----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVSLEHYLKKIQQVDFDIFHPSLQQKNTL-LPLSLYIQSWRK 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: EFX87698.1 (hypothetical protein DAPPUDRAFT_306430 [Daphnia pulex])

HSP 1 Score: 232.6 bits (592), Expect = 1.800e-57
Identity = 127/311 (40.84%), Postives = 192/311 (61.74%), Query Frame = 0
Query:   47 RPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKD-VARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRKI 357
            R  +  +   SS      N   YC ELV++HD++ +L  LL+P  SR++  A+RAFNV  A ++D V++G    GQMRM++W E + A+YQ+  PA  VA  L EAVQ HNL++RWL RL+ +R   L +    +++ +EDYAEH+ SS+LYLTLESL ++   +DHAASH+G+A G+ TLLRA  Y++ +Q +Y+PL+L  + KV+ ND LRG       + + D+ F+VA+ A+ H++ AR ++   PS A          AL+P +    YL+ L+ + F+  D  L  R++L    +LWW  +R KI
Sbjct:   17 RSIFFVARKLSSKVQTSKNSFLYCQELVRKHDYENFLAALLLPQASRQSTIAVRAFNVSLAQVQDQVSQGTI--GQMRMKFWSETLEAVYQNTPPAQLVALQLYEAVQRHNLSKRWLQRLISSRENHLSSKAFQSLSKVEDYAEHSVSSVLYLTLESLNIRKVDSDHAASHIGRAQGLVTLLRAIPYNSKRQQVYVPLDLLVQHKVSQNDFLRGSDD----KKVKDLIFDVASTANAHIQKARTIIPKVPSEAK--------IALMPLISVDSYLDQLRAADFNVFDPKLSQRNNL-LPWKLWWNKFRGKI 312          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_015980900.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Rousettus aegyptiacus])

HSP 1 Score: 232.6 bits (592), Expect = 1.800e-57
Identity = 139/342 (40.64%), Postives = 199/342 (58.19%), Query Frame = 0
Query:   15 IAAKSLCPTHPTH-LSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            +   SLC   P   L +R R LP       PGP     S  + S   A   +  +YC+EL+++ D++ YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH  ++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+  FD     L  RS L   + L+  +WR++
Sbjct:   15 LGVPSLCRRRPPRDLWARVRRLPG-----LPGPAGSGQSVAAASGPGASGTD--QYCMELLRKRDYEGYLCSLLLPAQSRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGTRRRVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQAHLHLKHARTFHKSVPVKA--------FPAFLQTVTLEDYLKKIQQVDFDIFHPSLQQRSTL-LPLSLYIQSWRKR 335          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_007933047.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Orycteropus afer afer])

HSP 1 Score: 232.3 bits (591), Expect = 2.400e-57
Identity = 132/332 (39.76%), Postives = 197/332 (59.34%), Query Frame = 0
Query:   25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGE-YCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            P H+  R+  LP  +           +S  S ++ +   A+  + YC+EL+++ D++ YLC LL+P  SR A FALRAFNVE A +KD      + GQMRMQ+W+  +  IY D  P  PVA  L +A++ HNLT+RWL ++++ R ++LD+     + +LE YAE+T SSLLYLTLE LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A LP V    YL+ +Q+  FD     L  ++ L   + L+  +WR++
Sbjct:   26 PQHMRVRSHRLPELA-----------VSGRSVAAASGPGASSTDLYCLELLRKRDYEGYLCSLLLPAESRSAAFALRAFNVELAQVKDSVSEKTI-GQMRMQFWKNTVEDIYCDSPPHQPVAIELWKAIKRHNLTKRWLMKIIDEREKNLDDKMYRNIQELETYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRKSQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLPTVALEDYLKKIQRVDFDIFHPALQQKNPL-LPLSLYIQSWRKR 332          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_011371185.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Pteropus vampyrus])

HSP 1 Score: 232.3 bits (591), Expect = 2.400e-57
Identity = 137/335 (40.90%), Postives = 197/335 (58.81%), Query Frame = 0
Query:   21 CPTHPTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            C   P  L +R R LP       PGP     S  + S   A   +  +YC+EL+++ D+++YLC LL+P  SR + FALRAFNVE A +KD      + G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE+YAE+T SSLLYLTLE LGV+   ADHAASH+GKA GI T LRAT YH  ++ +++P+++     V+  D LR  Q     + + DV +++A+QAHLHL+HAR    S P  A        F A L  V    YL+ +Q+  FD     L  R+ L   + L+  +WR++
Sbjct:   22 CRRPPRGLWARVRRLPG-----FPGPAGSGRSVAAASGPGASGTD--QYCMELLRKRDYESYLCSLLLPAQSRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYHNIQELENYAENTQSSLLYLTLEILGVKDLHADHAASHIGKAQGIVTCLRATPYHGTRRRVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVALEDYLKKIQQVDFDIFHPSLQQRNTL-LPLFLYVQSWRKR 335          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_001379587.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Monodelphis domestica])

HSP 1 Score: 231.1 bits (588), Expect = 5.400e-57
Identity = 128/307 (41.69%), Postives = 187/307 (60.91%), Query Frame = 0
Query:   48 PYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355
            P  L   +T+S+  +      YCVEL+++ D++ YLC LL+PT +R + FALRAFN E A +KD      + GQMRMQ+WR+ +  +Y D  P  PVA  L +AV+ HNLT+RWL ++++ R ++LD+     + +LE YAE+T SSLLYLTLE LGV++  ADHAASH+GKA GI T LRAT YH++++ +++P+++     V+  D LR  Q     + + DV +++A+Q HLHL HAR    S P  A        F A L  V    YLE +QK  FD     L  ++ L   + L+  +W++
Sbjct:   38 PAVLGRRATASSRTEVPGNDRYCVELLRKRDYEGYLCCLLLPTEARSSAFALRAFNAELAQVKDSISQKTI-GQMRMQFWRKAVEDMYSDNPPHQPVAIELWKAVKRHNLTKRWLVKIIDEREKNLDDKAYRNIQELEAYAENTQSSLLYLTLEVLGVRNVHADHAASHIGKAQGIITCLRATPYHSSRRKVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQGHLHLIHARSFQKSVPVKA--------FPAFLQTVALEDYLEKIQKVDFDVFHPRLQQKNPL-LALHLYIRSWKK 330          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_014666118.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 [Priapulus caudatus])

HSP 1 Score: 230.7 bits (587), Expect = 7.000e-57
Identity = 121/305 (39.67%), Postives = 187/305 (61.31%), Query Frame = 0
Query:   49 YYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWR 354
            +Y S T  +ST        +YC+++V++ D++ +LC LL+P   R +  A+RAFNVE A ++D      + G MR+Q+W++ +  +Y++ +P  PVA  L  A+ + NL+RRWL +L+EAR + L+   P T+  +E+YA+ T+S++++L LES+G++   ADHAASH+GKA G TTLLRAT YHA+ + L +P+E+  + KV+   + RG Q     Q + D  FE+A+ AH HL+ AR L SS P PA         +  LPA+    YL  LQ++ F+  D  L  ++HL    +LWW   R
Sbjct:   23 FYASQTKKTST--------DYCIDIVRRSDYEGFLCTLLLPEHGRTSAMAIRAFNVEIAQVQDTVTNKQI-GLMRLQFWKDSLDQLYKEAAPKQPVAMELGRAIHSKNLSRRWLTKLIEARERSLEEKAPMTVKAVEEYADCTSSAVMFLVLESVGIRDVHADHAASHLGKALGFTTLLRATPYHASLRKLNLPVEVLAKHKVSEEQVYRGSQE----QEMKDAVFELASLAHQHLDKARSLSSSLPRPA--------LSVFLPALVCDNYLTGLQRAHFNVFDAKLQQKAHL-LPAKLWWKKLR 305          
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_002710745.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Oryctolagus cuniculus])

HSP 1 Score: 230.3 bits (586), Expect = 9.200e-57
Identity = 131/332 (39.46%), Postives = 199/332 (59.94%), Query Frame = 0
Query:   25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTS-STAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356
            P  L  R R LP P+           +S  S + ++  D +   +YC+EL+++ D++ YLC LL+P  SR +  ALRAFNVE A +KD     A+ G MRMQ+W++ +  IY D  P  PVA  L +AV+ HNLT+RW  ++++ R ++LD+     + +LE+YAE+T S+LLYLTLE+LG++   ADHAASH+GKA GI T LRAT YH +++ +++P+++     V+  D+LR  Q     + + DV +++A+QAHLHL+HAR    S P+ A        F A L  V    YL+ +Q+  FD     L  R+ L   + L+  +WR++
Sbjct:   26 PRDLCVRERRLPGPA-----------VSGRSVAVASGLDASGSEQYCLELLRKRDYEGYLCSLLLPAESRSSALALRAFNVELAQVKDSVSEKAI-GLMRMQFWKKTVEDIYLDNPPHQPVAIELWKAVKRHNLTKRWFMKIIDEREKNLDDKVYCNIQELENYAENTQSALLYLTLETLGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDVLRKSQD----KKVRDVIYDIASQAHLHLKHARSFHKSVPARA--------FPAFLQTVSLEDYLKKIQQVDFDIFHPSLQRRNAL-LPLSLYIQSWRKR 332          
The following BLAST results are available for this feature:
BLAST of NO07G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27096.13.500e-14181.05isoprenoid biosynthesis enzyme [Nannochloropsis ga... [more]
CBJ31125.11.500e-5945.64conserved unknown protein [Ectocarpus siliculosus][more]
XP_005328725.11.400e-5741.80NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
EFX87698.11.800e-5740.84hypothetical protein DAPPUDRAFT_306430 [Daphnia pu... [more]
XP_015980900.11.800e-5740.64PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_007933047.12.400e-5739.76PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_011371185.12.400e-5740.90NADH dehydrogenase (ubiquinone) complex I, assembl... [more]
XP_001379587.15.400e-5741.69PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_014666118.17.000e-5739.67PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]
XP_002710745.19.200e-5739.46PREDICTED: NADH dehydrogenase (ubiquinone) complex... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL094nonsL094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR133ngnoR133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000572NSK000572Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02670.1NO07G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580874gene_2598Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100046g44gene3463Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02670.1NO07G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02670 ID=NO07G02670|Name=NO07G02670|organism=Nannochloropsis oceanica|type=gene|length=1071bp
ATGTCTCCGCGGTCATCCGTCGCCTATTTTCGGGCCGCCGCCATCGCCGC
CAAATCCCTCTGTCCCACACATCCCACACACTTGTCCTCTCGAACACGAA
ACCTCCCCTCTCCATCTCATCGACCTCACCCCGGACCGCGGCCGTACTAT
CTCTCCTCTACCTCCACGTCCTCCACTGCCGCAGACCCTGCCAATTACGG
CGAATACTGTGTTGAGCTGGTCAAGCAGCACGATTTTGACGCCTATTTGT
GTGGCCTCCTTGTGCCCACCCCCTCCCGACGGGCCTTTTTTGCCCTCCGT
GCGTTCAACGTTGAAACGGCGCTCATCAAGGACGTGGCCCGCGGCAATGC
ACTGCCGGGGCAAATGCGTATGCAATGGTGGCGGGAAGTCATCGGTGCTA
TCTACCAAGATAAATCCCCTGCGCACCCTGTCGCCCGTGCCTTGGCAGAA
GCCGTACAAGCCCACAACCTCACCCGGAGGTGGCTCGACCGTCTCCTCGA
AGCTCGCCTCCAAGATCTAGATAACATCCAACCCACAACCATGGCCGATC
TGGAGGACTACGCCGAGCACACTGCCTCCTCCCTCCTCTACCTTACCCTT
GAAAGCCTCGGCGTGCAGCACCAAACGGCGGATCACGCTGCAAGTCACGT
AGGCAAAGCCACAGGCATCACCACCTTGCTACGTGCAACCAGATACCACG
CCGCCCAACAGTCCCTCTACATCCCTCTGGAGCTCCAAAGAGAATTTAAA
GTGAACGTAAACGATATTCTGAGAGGGCCTCAAAGCCCCGAGGCTGTCCA
AGCCTTATCCGACGTATTTTTTGAGGTAGCAACCCAGGCACATTTACACC
TGGAGCACGCAAGAGAGTTGCTTTCTTCTACCCCCTCTCCGGCGACGGGA
CCATTGCCAAAGGCAACGTTTACGGCGTTACTACCGGCTGTGAGGACGAC
AATGTACCTGGAGGCGTTGCAGAAAAGTGGGTTTGACGCTCTGGATGAGG
GATTGTTGCCACGAAGTCATCTAGGATTTCAAATGCGGTTGTGGTGGGCG
AACTGGAGGCGGAAAATTTAG
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protein sequence of NO07G02670.1

>NO07G02670.1-protein ID=NO07G02670.1-protein|Name=NO07G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MSPRSSVAYFRAAAIAAKSLCPTHPTHLSSRTRNLPSPSHRPHPGPRPYY
LSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALR
AFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAE
AVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTL
ESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFK
VNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATG
PLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWA
NWRRKI*
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Synonyms
Publications