NO07G02670, NO07G02670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02670 vs. NCBI_GenBank
Match: EWM27096.1 (isoprenoid biosynthesis enzyme [Nannochloropsis gaditana]) HSP 1 Score: 510.8 bits (1314), Expect = 3.500e-141 Identity = 248/306 (81.05%), Postives = 278/306 (90.85%), Query Frame = 0 Query: 51 LSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRKI 357 L++ ST S+ DPAN+G+YCVELVKQHDFDAYLCGLLVP SRRA+FALRAFNVETALIKDVARGNALPGQMRMQWWREVI IYQ KSPAHPVARAL EAVQAHNLTRRWLDRLLEAR DL NIQPT M +LEDYAE+TASSLLYLTLE+L V+H TADHAASHVG+ATGI T+LRAT++HA+ QSLY+PLE+QREFKVNVNDILRGP+SPEA QALSD+FFEVATQAHLH+EHARE+L+S P ++GPLP+ T TALLPAVRTTMYL+ALQK+GF+ALD+ LLPRSHL FQ+RLWWANWR KI Sbjct: 36 LAAFSTKSSGPDPANHGQYCVELVKQHDFDAYLCGLLVPRSSRRAYFALRAFNVETALIKDVARGNALPGQMRMQWWREVISGIYQGKSPAHPVARALCEAVQAHNLTRRWLDRLLEAREGDLGNIQPTRMEELEDYAENTASSLLYLTLEALHVRHPTADHAASHVGRATGIATVLRATKFHASHQSLYVPLEIQREFKVNVNDILRGPESPEAAQALSDMFFEVATQAHLHMEHAREMLASPPPSSSGPLPRNTITALLPAVRTTMYLKALQKNGFNALDQDLLPRSHLEFQLRLWWANWRGKI 341
BLAST of NO07G02670 vs. NCBI_GenBank
Match: CBJ31125.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 239.6 bits (610), Expect = 1.500e-59 Identity = 136/298 (45.64%), Postives = 176/298 (59.06%), Query Frame = 0 Query: 69 YCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAV--QAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQ------HQTADHAASHVGKATGITTLLRATRYH-----------AAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRL 348 +C ++VK+ D+D YL LL R A A+RAFNVETA IKD RGN +PG+MRMQWW++ + ++ + P PVA ALAE V Q LTRRW DR+L+AR+ DLD QP T+ ++E YAE+TASSLLYL+LE GV+ HAA HVGKA GI TLLR+ +S +P ++ R F + + RGPQ + AL++ F VA+ A H+E A E L++ G LP F ALLP VR YLE LQ GF+A DE L P+S FQ+RL Sbjct: 17 HCSDVVKRGDYDGYLYSLLQGAQLRPASLAIRAFNVETAAIKDSVRGNVMPGKMRMQWWKDTMADVFVGEPPPLPVALALAEVVANQKGGLTRRWFDRVLDARMADLDRTQPETLEEMETYAENTASSLLYLSLELAGVRAGAGPGAAALGHAAGHVGKAAGICTLLRSLALPPPPAALSSGSIGFAESCVLPSDVMRRFLLRHAVLERGPQDDKEAHALAECVFAVASVAKGHIEAAEEGLAAAREETGGKLPAGAFAALLPGVRVAWYLETLQACGFNAFDESLRPQSPFKFQLRL 314
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_005328725.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Ictidomys tridecemlineatus]) HSP 1 Score: 233.0 bits (593), Expect = 1.400e-57 Identity = 130/311 (41.80%), Postives = 191/311 (61.41%), Query Frame = 0 Query: 44 PGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355 PGP S +TS ++ YC+EL+++ D++ YLC LL+P SR + FALRAFNVE A IKD A+ G MRMQ+W++ + IY D P PVA L +AV+ HNLT+RWL ++++ R ++LD+ + +LE+YAE+T SSLLYLTLE LG++ ADHAASH+GKA GI T LRAT YH +++ +++P+++ + V+ D LR Q+ + + DV +++A+QAHLHL+HAR S P A F A L V YL+ +Q+ FD L ++ L + L+ +WR+ Sbjct: 38 PGPAVTRRSVVATSGPGVSGTDH--YCLELLRKRDYETYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKAI-GLMRMQFWKKTVEEIYHDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMQHGVSQEDFLRRNQN----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVSLEHYLKKIQQVDFDIFHPSLQQKNTL-LPLSLYIQSWRK 332
BLAST of NO07G02670 vs. NCBI_GenBank
Match: EFX87698.1 (hypothetical protein DAPPUDRAFT_306430 [Daphnia pulex]) HSP 1 Score: 232.6 bits (592), Expect = 1.800e-57 Identity = 127/311 (40.84%), Postives = 192/311 (61.74%), Query Frame = 0 Query: 47 RPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKD-VARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRKI 357 R + + SS N YC ELV++HD++ +L LL+P SR++ A+RAFNV A ++D V++G GQMRM++W E + A+YQ+ PA VA L EAVQ HNL++RWL RL+ +R L + +++ +EDYAEH+ SS+LYLTLESL ++ +DHAASH+G+A G+ TLLRA Y++ +Q +Y+PL+L + KV+ ND LRG + + D+ F+VA+ A+ H++ AR ++ PS A AL+P + YL+ L+ + F+ D L R++L +LWW +R KI Sbjct: 17 RSIFFVARKLSSKVQTSKNSFLYCQELVRKHDYENFLAALLLPQASRQSTIAVRAFNVSLAQVQDQVSQGTI--GQMRMKFWSETLEAVYQNTPPAQLVALQLYEAVQRHNLSKRWLQRLISSRENHLSSKAFQSLSKVEDYAEHSVSSVLYLTLESLNIRKVDSDHAASHIGRAQGLVTLLRAIPYNSKRQQVYVPLDLLVQHKVSQNDFLRGSDD----KKVKDLIFDVASTANAHIQKARTIIPKVPSEAK--------IALMPLISVDSYLDQLRAADFNVFDPKLSQRNNL-LPWKLWWNKFRGKI 312
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_015980900.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Rousettus aegyptiacus]) HSP 1 Score: 232.6 bits (592), Expect = 1.800e-57 Identity = 139/342 (40.64%), Postives = 199/342 (58.19%), Query Frame = 0 Query: 15 IAAKSLCPTHPTH-LSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356 + SLC P L +R R LP PGP S + S A + +YC+EL+++ D++ YLC LL+P SR + FALRAFNVE A +KD + G MRMQ+W++ + IY D P PVA L +AV+ HNLT+RWL ++++ R ++LD+ + +LE+YAE+T SSLLYLTLE LG++ ADHAASH+GKA GI T LRAT YH ++ +++P+++ V+ D LR Q + + DV +++A+QAHLHL+HAR S P A F A L V YL+ +Q+ FD L RS L + L+ +WR++ Sbjct: 15 LGVPSLCRRRPPRDLWARVRRLPG-----LPGPAGSGQSVAAASGPGASGTD--QYCMELLRKRDYEGYLCSLLLPAQSRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGTRRRVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQAHLHLKHARTFHKSVPVKA--------FPAFLQTVTLEDYLKKIQQVDFDIFHPSLQQRSTL-LPLSLYIQSWRKR 335
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_007933047.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Orycteropus afer afer]) HSP 1 Score: 232.3 bits (591), Expect = 2.400e-57 Identity = 132/332 (39.76%), Postives = 197/332 (59.34%), Query Frame = 0 Query: 25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGE-YCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356 P H+ R+ LP + +S S ++ + A+ + YC+EL+++ D++ YLC LL+P SR A FALRAFNVE A +KD + GQMRMQ+W+ + IY D P PVA L +A++ HNLT+RWL ++++ R ++LD+ + +LE YAE+T SSLLYLTLE LG++ ADHAASH+GKA GI T LRAT YH +++ +++P+++ V+ D LR Q + + DV +++A+QAHLHL+HAR S P A F A LP V YL+ +Q+ FD L ++ L + L+ +WR++ Sbjct: 26 PQHMRVRSHRLPELA-----------VSGRSVAAASGPGASSTDLYCLELLRKRDYEGYLCSLLLPAESRSAAFALRAFNVELAQVKDSVSEKTI-GQMRMQFWKNTVEDIYCDSPPHQPVAIELWKAIKRHNLTKRWLMKIIDEREKNLDDKMYRNIQELETYAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRKSQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLPTVALEDYLKKIQRVDFDIFHPALQQKNPL-LPLSLYIQSWRKR 332
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_011371185.1 (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Pteropus vampyrus]) HSP 1 Score: 232.3 bits (591), Expect = 2.400e-57 Identity = 137/335 (40.90%), Postives = 197/335 (58.81%), Query Frame = 0 Query: 21 CPTHPTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356 C P L +R R LP PGP S + S A + +YC+EL+++ D+++YLC LL+P SR + FALRAFNVE A +KD + G MRMQ+W++ + IY D P PVA L +AV+ HNLT+RWL ++++ R ++LD+ + +LE+YAE+T SSLLYLTLE LGV+ ADHAASH+GKA GI T LRAT YH ++ +++P+++ V+ D LR Q + + DV +++A+QAHLHL+HAR S P A F A L V YL+ +Q+ FD L R+ L + L+ +WR++ Sbjct: 22 CRRPPRGLWARVRRLPG-----FPGPAGSGRSVAAASGPGASGTD--QYCMELLRKRDYESYLCSLLLPAQSRSSAFALRAFNVELAQVKDSVSEKTI-GLMRMQFWKKTVDDIYSDNPPHQPVAIELWKAVKRHNLTKRWLMKIIDEREKNLDDKAYHNIQELENYAENTQSSLLYLTLEILGVKDLHADHAASHIGKAQGIVTCLRATPYHGTRRRVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQAHLHLKHARSFHKSVPVKA--------FPAFLQTVALEDYLKKIQQVDFDIFHPSLQQRNTL-LPLFLYVQSWRKR 335
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_001379587.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Monodelphis domestica]) HSP 1 Score: 231.1 bits (588), Expect = 5.400e-57 Identity = 128/307 (41.69%), Postives = 187/307 (60.91%), Query Frame = 0 Query: 48 PYYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRR 355 P L +T+S+ + YCVEL+++ D++ YLC LL+PT +R + FALRAFN E A +KD + GQMRMQ+WR+ + +Y D P PVA L +AV+ HNLT+RWL ++++ R ++LD+ + +LE YAE+T SSLLYLTLE LGV++ ADHAASH+GKA GI T LRAT YH++++ +++P+++ V+ D LR Q + + DV +++A+Q HLHL HAR S P A F A L V YLE +QK FD L ++ L + L+ +W++ Sbjct: 38 PAVLGRRATASSRTEVPGNDRYCVELLRKRDYEGYLCCLLLPTEARSSAFALRAFNAELAQVKDSISQKTI-GQMRMQFWRKAVEDMYSDNPPHQPVAIELWKAVKRHNLTKRWLVKIIDEREKNLDDKAYRNIQELEAYAENTQSSLLYLTLEVLGVRNVHADHAASHIGKAQGIITCLRATPYHSSRRKVFLPMDICMLHGVSQEDFLRKNQD----KNVRDVIYDIASQGHLHLIHARSFQKSVPVKA--------FPAFLQTVALEDYLEKIQKVDFDVFHPRLQQKNPL-LALHLYIRSWKK 330
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_014666118.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X1 [Priapulus caudatus]) HSP 1 Score: 230.7 bits (587), Expect = 7.000e-57 Identity = 121/305 (39.67%), Postives = 187/305 (61.31%), Query Frame = 0 Query: 49 YYLSSTSTSSTAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWR 354 +Y S T +ST +YC+++V++ D++ +LC LL+P R + A+RAFNVE A ++D + G MR+Q+W++ + +Y++ +P PVA L A+ + NL+RRWL +L+EAR + L+ P T+ +E+YA+ T+S++++L LES+G++ ADHAASH+GKA G TTLLRAT YHA+ + L +P+E+ + KV+ + RG Q Q + D FE+A+ AH HL+ AR L SS P PA + LPA+ YL LQ++ F+ D L ++HL +LWW R Sbjct: 23 FYASQTKKTST--------DYCIDIVRRSDYEGFLCTLLLPEHGRTSAMAIRAFNVEIAQVQDTVTNKQI-GLMRLQFWKDSLDQLYKEAAPKQPVAMELGRAIHSKNLSRRWLTKLIEARERSLEEKAPMTVKAVEEYADCTSSAVMFLVLESVGIRDVHADHAASHLGKALGFTTLLRATPYHASLRKLNLPVEVLAKHKVSEEQVYRGSQE----QEMKDAVFELASLAHQHLDKARSLSSSLPRPA--------LSVFLPALVCDNYLTGLQRAHFNVFDAKLQQKAHL-LPAKLWWKKLR 305
BLAST of NO07G02670 vs. NCBI_GenBank
Match: XP_002710745.1 (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Oryctolagus cuniculus]) HSP 1 Score: 230.3 bits (586), Expect = 9.200e-57 Identity = 131/332 (39.46%), Postives = 199/332 (59.94%), Query Frame = 0 Query: 25 PTHLSSRTRNLPSPSHRPHPGPRPYYLSSTSTS-STAADPANYGEYCVELVKQHDFDAYLCGLLVPTPSRRAFFALRAFNVETALIKDVARGNALPGQMRMQWWREVIGAIYQDKSPAHPVARALAEAVQAHNLTRRWLDRLLEARLQDLDNIQPTTMADLEDYAEHTASSLLYLTLESLGVQHQTADHAASHVGKATGITTLLRATRYHAAQQSLYIPLELQREFKVNVNDILRGPQSPEAVQALSDVFFEVATQAHLHLEHARELLSSTPSPATGPLPKATFTALLPAVRTTMYLEALQKSGFDALDEGLLPRSHLGFQMRLWWANWRRK 356 P L R R LP P+ +S S + ++ D + +YC+EL+++ D++ YLC LL+P SR + ALRAFNVE A +KD A+ G MRMQ+W++ + IY D P PVA L +AV+ HNLT+RW ++++ R ++LD+ + +LE+YAE+T S+LLYLTLE+LG++ ADHAASH+GKA GI T LRAT YH +++ +++P+++ V+ D+LR Q + + DV +++A+QAHLHL+HAR S P+ A F A L V YL+ +Q+ FD L R+ L + L+ +WR++ Sbjct: 26 PRDLCVRERRLPGPA-----------VSGRSVAVASGLDASGSEQYCLELLRKRDYEGYLCSLLLPAESRSSALALRAFNVELAQVKDSVSEKAI-GLMRMQFWKKTVEDIYLDNPPHQPVAIELWKAVKRHNLTKRWFMKIIDEREKNLDDKVYCNIQELENYAENTQSALLYLTLETLGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDVLRKSQD----KKVRDVIYDIASQAHLHLKHARSFHKSVPARA--------FPAFLQTVSLEDYLKKIQQVDFDIFHPSLQRRNAL-LPLSLYIQSWRKR 332 The following BLAST results are available for this feature:
BLAST of NO07G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02670 ID=NO07G02670|Name=NO07G02670|organism=Nannochloropsis oceanica|type=gene|length=1071bpback to top protein sequence of NO07G02670.1 >NO07G02670.1-protein ID=NO07G02670.1-protein|Name=NO07G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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