NO07G02660, NO07G02660 (gene) Nannochloropsis oceanica

Overview
NameNO07G02660
Unique NameNO07G02660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length934
Alignment locationchr7:768228..769161 -

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Properties
Property NameValue
DescriptionNucleotide sugar transporter family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:768228..769161 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004853Tpt_PEP_trans_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008643carbohydrate transport
Homology
BLAST of NO07G02660 vs. NCBI_GenBank
Match: EWM29116.1 (nucleotide sugar transporter family protein [Nannochloropsis gaditana])

HSP 1 Score: 277.7 bits (709), Expect = 4.000e-71
Identity = 147/279 (52.69%), Postives = 196/279 (70.25%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQKTV 282
            S VG+VI+NKYIV  D+F++++FLSF H+ FT +   +L   G+   K   I   + +A+ SLGS+ FMNL+LAHNSVGFYQLSKLACIPV I +E A Y + VP   L+T+  I  GVG+A+V+DV++N +G   AA+AV            YQK L+CD++QLL+ + PL+  G  + IPFF NVR L Q   S  LL H+  SCVLALGVNI+N+L+LGKTSPL YQVLGHLK  +IL+LG VVF Y+ NA+ + G ++ALGGV+AYTEL R+ ++
Sbjct:   16 SVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLXXXXXXXXXXTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSL 294          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: EWM29117.1 (nucleotide sugar transporter family protein [Nannochloropsis gaditana])

HSP 1 Score: 273.1 bits (697), Expect = 9.800e-70
Identity = 144/275 (52.36%), Postives = 193/275 (70.18%), Query Frame = 0
Query:    7 IVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQKTV 282
            +VI+NKYIV  D+F++++FLSF H+ FT +   +L   G+   K   I   + +A+ SLGS+ FMNL+LAHNSVGFYQLSKLACIPV I +E A Y + VP   L+T+  I  GVG+A+V+DV++N +G   AA+AV            YQK L+CD++QLL+ + PL+  G  + IPFF NVR L Q   S  LL H+  SCVLALGVNI+N+L+LGKTSPL YQVLGHLK  +IL+LG VVF Y+ NA+ + G ++ALGGV+AYTEL R+ ++
Sbjct:   67 VVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAALAVLXXXXXXXXXXTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSL 341          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: CEP03463.1 (hypothetical protein PBRA_003221 [Plasmodiophora brassicae])

HSP 1 Score: 218.8 bits (556), Expect = 2.200e-53
Identity = 119/275 (43.27%), Postives = 183/275 (66.55%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGR 278
            S VGIVI NK++ +   F++V  LSF H+  T + +  L  A +   K   +   + +A+ +LGS+ FMNL+LA NSVGFYQ+SKLACIP  ++++Y L+++ V      ++ VI+ GVG+++V+DV +NFIGM  A +AV FT++ QI     Q+ L  DSMQLLH + P++ +GM V I  F +V  L Q E+++  +  I  +CVLA+GVN++N+L++GKTSP+ YQV+GH K  ++L+LG + F+     + IAG V+A+ GV+ Y E+ R
Sbjct:   17 SSVGIVITNKFVWSAHGFNFVATLSFLHFVTTALATRTLLAARFFEYKPAPLAGVMPVAIGTLGSVAFMNLNLAANSVGFYQISKLACIPATLILQYLLFKKQVSEKTRYSLLVILLGVGISTVTDVNVNFIGMAYALIAVAFTALGQIYTGSSQQQLGLDSMQLLHHSSPIIAVGMFVCIFLFDDVGALLQFEYTSSAVFLIALTCVLAVGVNVSNYLVIGKTSPITYQVVGHSKTCLVLVLGFLAFSTPVTLRSIAGIVIAMAGVIWYGEVKR 291          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: CUF15972.1 (transmembrane protein, putative [Bodo saltans])

HSP 1 Score: 169.9 bits (429), Expect = 1.200e-38
Identity = 107/276 (38.77%), Postives = 157/276 (56.88%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQ 279
            S +GIV  NK +    +F Y   L+F H+ FT V   I  + G    K+I + K + L ++  G +   NLSL +NSVGFYQL K+   P+I+V++   Y    P +  L++ +   GV +A+V+D   N IG ++A  A+  T M QI     QK LEC+S QLL+   P+  + ++  IP   ++  L +   ++  +T I  S +LA  VNI+ FL++GKTSP+ Y VLGH K TIIL LG VVFN   + + IAG ++ L GV  YT +  Q
Sbjct:   29 SSIGIVFSNKVVFQVYNFKYGTLLTFIHFIFTFVGLEICRQCGMFELKRIDLKKILPLCVSFCGFVALTNLSLVYNSVGFYQLMKVLTTPIIVVIQTLFYNETFPTNIKLSLALTCVGVAIATVTDSEANLIGTLVAISALLVTCMYQIWVGTKQKELECNSYQLLYWQAPISAVILVPIIPLLDDLSTLSEWP-NSDAVTAIIISSLLAFLVNISIFLVIGKTSPVTYNVLGHFKLTIILTLGFVVFNAHVDYRNIAGVLVTLSGVFWYTHIKTQ 303          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: EPZ33212.1 (DUF250 domain-containing protein [Rozella allomycis CSF55])

HSP 1 Score: 167.9 bits (424), Expect = 4.400e-38
Identity = 100/275 (36.36%), Postives = 162/275 (58.91%), Query Frame = 0
Query:    1 MISGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTEL 276
            +IS VGIV+LNK +    +F+Y  FL+  H+  T     + +  G    K+I I K +TL+ +  G +V  NLSL +NSVGFYQ++K+   P ++ ++Y  Y + V +  LLT+T I  GV +ASVSDV +NF G ++A + V  TS  Q+     QK LE +SMQLL    P+ ++ +L+ +P F ++  L   +++   +  I  +C+LA  VN++ FLI+GK S L Y ++GH K   +++LG+ +F+     + + G  + + GV  Y+ L
Sbjct:   26 VISSVGIVLLNKSVFKTYNFNYGTFLTILHFLGTFFGLLVCSMLGLFEFKRIPIKKVITLSASFCGFVVLTNLSLQYNSVGFYQMAKVLTTPGVVFIQYFFYNKSVNIKTLLTITWICIGVMIASVSDVRLNFRGAVVALLGVMVTSYYQVSIGSKQKELEVNSMQLLLYQSPISSLMLLIVLPLFEDLNALVNYQWTLNSIYAILGTCMLAFFVNLSIFLIIGKMSALTYNIVGHFKLCTVVVLGMFLFDEPPTNRSLLGISMTIAGVFYYSTL 300          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: OON10681.1 (hypothetical protein BSLG_00550 [Batrachochytrium salamandrivorans])

HSP 1 Score: 162.2 bits (409), Expect = 2.400e-36
Identity = 97/272 (35.66%), Postives = 154/272 (56.62%), Query Frame = 0
Query:    1 MISGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAY 273
            ++S VGIV+ NK++   + F +   L+  H+ FT V   I A+ G    K+I + + + L       +V  NLSL +NSVGFYQ++K+   P I+VV+   +  +  +     ++V+  GV ++  +DV INFIG ++A   V  + + QI     QK L+ +S QLL+   P+  + +L+FIP F ++ +L + E+S   L  I  S  LA  VN++ FLI+GKTSP+ Y V+GH K  I++ILG ++F      K   G  +A+ GV  Y
Sbjct:   90 IVSSVGIVLTNKWVFDREGFKFGTLLTVIHFIFTFVGLEICARYGLFERKRIPLKEVLGLCATFSAFVVLTNLSLQYNSVGFYQMAKVLTTPFIVVVQTIYHNTVFSVRTKAALSVVCIGVAISGTTDVRINFIGTLVALAGVVSSGLYQIWVGTRQKELDVNSFQLLYYQAPISAVMLLIFIPMFDDMHKLYEFEWSTSALLSILTSAGLAFFVNLSTFLIIGKTSPVTYNVVGHFKICIVIILGFIIFQDVVVWKNALGIAIAMIGVFWY 361          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: XP_001682737.1 (conserved hypothetical protein [Leishmania major strain Friedlin] >XP_001682740.1 conserved hypothetical protein [Leishmania major strain Friedlin] >CAJ07245.1 conserved hypothetical protein [Leishmania major strain Friedlin] >CAJ07248.1 conserved hypothetical protein [Leishmania major strain Friedlin])

HSP 1 Score: 160.6 bits (405), Expect = 7.100e-36
Identity = 100/279 (35.84%), Postives = 151/279 (54.12%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSA--PLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQK 280
            S +GIV  NK I T   F Y   L+  H+F T +   I    G   PK+I + K + L +   G +   N+SL +NS+GFYQL K+   P+++V++   Y++       L++TV   GVG+++VSD + N  G ++A   +  T M QI     Q   +CD  QLL++  P   I   + +P  +   +L    ++   P +  I +S +LA  VNI+ FL++GKTSP+ Y VLGH K  +IL LG + F  Q NA++  G V+ L GV  YT L  Q+
Sbjct:   18 SSIGIVYTNKVIFTRHGFSYGTLLTVIHFFITTLGLFICRMMGVFEPKRIPVLKILPLCVGFCGFVALNNVSLVYNSIGFYQLMKVLTTPMLVVIQTLFYQKTFSAKVKLSLTVTCIGVGLSTVSDTSANLAGTVVALSTLLITCMYQIWVGTKQSEFQCDGFQLLYNQAP---ISCAMLMPMAYFADDLANKYYTPCWPTIIVIIFSGLLAFFVNISIFLVIGKTSPVTYNVLGHFKLCVILFLGFLWFGDQMNARIFLGIVITLFGVFWYTHLKMQE 293          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: XP_003874329.1 (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >CBZ25825.1 conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103])

HSP 1 Score: 159.8 bits (403), Expect = 1.200e-35
Identity = 101/279 (36.20%), Postives = 152/279 (54.48%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSA--PLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQK 280
            S +GIV  NK I T   F Y   L+  H+F T +   I    G   PK+I + K + L +   G +   N+SL +N++GFYQL K+   P+++V++   Y++       L++TV   GV +++VSD + NF G ++A  A+  T M QI     Q  L CDS QLL++  P   I   + +P  +   +L    ++   P +  I +S  LA  VNI+ FL++GKTSP+ Y VLGH K  +IL LG + F  Q NA++  G ++ L GV  YT L  Q+
Sbjct:   18 SSIGIVYTNKVIFTRHGFSYGTLLTVIHFFITTLGLFICRMMGVFEPKRIPVLKILPLCVGFCGFVALNNVSLVYNNIGFYQLIKVLTTPMLVVIQTLFYQKTFSAKVKLSLTVTCIGVALSTVSDTSANFSGTVVALSALLITCMYQIWVGTKQTELHCDSFQLLYNQAP---ISCAMLMPMAYFADDLANKYYTPCWPTIMLITFSGFLAFFVNISIFLVIGKTSPVTYNVLGHFKLCVILSLGFLWFGDQMNARIFLGILITLSGVFWYTHLKMQE 293          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: XP_001465121.1 (conserved hypothetical protein [Leishmania infantum JPCM5] >XP_003860326.1 conserved hypothetical protein [Leishmania donovani] >CAM67364.1 conserved hypothetical protein [Leishmania infantum JPCM5] >CBZ33619.1 conserved hypothetical protein [Leishmania donovani] >SOX64727.1 Triose-phosphateTransporterfamily-putative|Pfam:PF03151 [Leishmania infantum])

HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35
Identity = 100/279 (35.84%), Postives = 152/279 (54.48%), Query Frame = 0
Query:    3 SGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSA--PLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYTELGRQK 280
            S +GIV  NK I T   F Y   L+  H+F T +   I    G   PK+I + K + L +   G +   N+SL +N++GFYQL K+   P+++V++   Y++       L++TV   GVG+++V+D + N  G ++A  A+  T M QI     Q    CDS QLL++  P   I   + +P  +   +L    ++   P +  I +S +LA  VNI+ FL++GKTSP+ Y VLGH K  +IL LG + F  Q NA++  G V+ L GV  YT L  Q+
Sbjct:   18 SSIGIVYTNKVIFTRHGFSYGTLLTVIHFFITTLGLFICRMMGVFEPKRIPVLKILPLCVGFCGFVALNNVSLVYNTIGFYQLIKVLTTPMLVVIQTLFYQKTFSAKVKLSLTVTCIGVGLSTVNDTSANLAGTVVALSALLITCMYQIWVGTKQSEFHCDSFQLLYNQAP---ISCAMLMPMAYFADDLANKYYTPCWPTIIVIIFSGLLAFFVNISIFLVIGKTSPVTYNVLGHFKLCVILSLGFLWFGDQMNARIFLGIVITLFGVFWYTHLKMQE 293          
BLAST of NO07G02660 vs. NCBI_GenBank
Match: KXS21661.1 (TPT-domain-containing protein [Gonapodya prolifera JEL478])

HSP 1 Score: 159.5 bits (402), Expect = 1.600e-35
Identity = 91/273 (33.33%), Postives = 153/273 (56.04%), Query Frame = 0
Query:    1 MISGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPKQIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYALYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAPLLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVFNYQYNAKVIAGTVLALGGVVAYT 274
            ++S VGIV+ NK++     F++   L+  H+  T V   +LA+ GY   K +A  +   L+ A  G +V  NLSL +NSVGFYQ +K+   PV++ ++   Y   +     L++           ++DV +N +G ++A   V  TS+ QI     QK LE D++QLLH+  P+  + +L+  PFF ++  L   E +AP +  I  +   +  VN++ + I+G+TSPL Y V+GH K   ++ILG ++F+Y    K ++G +L + G++ YT
Sbjct:    5 VVSSVGIVLTNKWVFKVHKFNFGTLLTVIHFVTTSVGLELLARMGYFHRKYVAPSRIFLLSSAFCGFVVLTNLSLQYNSVGFYQCAKVLTTPVVVGIQTLFYGITISNRLKLSLXXXXXXXXXXXITDVELNLLGFLIAMAGVLVTSLYQIWVGTKQKELELDALQLLHNQAPISALSLLILFPFFDDLEALKAYELTAPAIRDIAITAAFSFFVNVSIYGIIGRTSPLTYNVVGHFKTVTVVILGFILFSYPVMFKNVSGILLTIAGIIWYT 277          
The following BLAST results are available for this feature:
BLAST of NO07G02660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29116.14.000e-7152.69nucleotide sugar transporter family protein [Nanno... [more]
EWM29117.19.800e-7052.36nucleotide sugar transporter family protein [Nanno... [more]
CEP03463.12.200e-5343.27hypothetical protein PBRA_003221 [Plasmodiophora b... [more]
CUF15972.11.200e-3838.77transmembrane protein, putative [Bodo saltans][more]
EPZ33212.14.400e-3836.36DUF250 domain-containing protein [Rozella allomyci... [more]
OON10681.12.400e-3635.66hypothetical protein BSLG_00550 [Batrachochytrium ... [more]
XP_001682737.17.100e-3635.84conserved hypothetical protein [Leishmania major s... [more]
XP_003874329.11.200e-3536.20conserved hypothetical protein [Leishmania mexican... [more]
XP_001465121.11.600e-3535.84conserved hypothetical protein [Leishmania infantu... [more]
KXS21661.11.600e-3533.33TPT-domain-containing protein [Gonapodya prolifera... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL094nonsL094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR133ngnoR133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02660.1NO07G02660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580866gene_2597Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02660.1NO07G02660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02660 ID=NO07G02660|Name=NO07G02660|organism=Nannochloropsis oceanica|type=gene|length=934bp
ATGATCTCCGGAGTGGGAATTGTGATTTTAAACAAATACATTGTCACCGA
GGACAGTTTTGACTACGTGGTGTTCTTATCCTTTTGTCATTACTTCTTTA
CAATGGTATTTTCCGGCATCCTGGCAAAGGCAGGATATGTAACGCCCAAA
CAAATCGCCATCGACAAGCGCGTGACCCTCGCAATGgtatgaacagctaa
atgtgaaatttcctattgtctgttcctatccccctcctattttcattctc
cttgcactttctcctcaccagGCATCTCTCGGCTCCATTGTCTTCATGAA
TCTGAGCTTGGCTCATAATTCTGTTGGCTTTTACCAGCTCTCCAAGCTCG
CATGTATCCCCGTCATTATTGTGGTTGAATATGCTCTATACGAAAGAATA
GTGCCTCTCTCCAAGCTGCTGACGGTCACCGTCATCGTCTTTGGGGTTGG
GGTGGCATCTGTAAGTGATGTGACAATCAATTTCATTGGAATGATTCTGG
CCGCGGTGGCGGTTACTTTTACATCCATGGCACAAATACTTTGTTCGCAC
TACCAAAAGTACTTGGAATGTGATTCCATGCAGCTCTTACACAGTACCTG
CCCCCTAGTGACGATCGGGATGCTGGTCTTTATCCCCTTCTTCCACAACG
TCCGCGAGCTTGGCCAGGCGGAGTTTTCAGCACCCTTATTGACACACATC
TTTTGGTCCTGTGTTTTGGCCTTGGGAGTCAACATCACAAACTTTTTAAT
CTTGGGCAAAACCTCGCCCTTGGCATACCAGGTCCTCGGGCACCTCAAAG
CCACAATTATTTTGATACTTGGGGTCGTGGTATTCAATTATCAGTACAAC
GCGAAAGTCATTGCCGGCACTGTCCTGGCATTAGGAGGAGTGGTGGCCTA
TACCGAACTTGGAAGACAAAAAACTGTAGGTTAG
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protein sequence of NO07G02660.1

>NO07G02660.1-protein ID=NO07G02660.1-protein|Name=NO07G02660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=283bp
MISGVGIVILNKYIVTEDSFDYVVFLSFCHYFFTMVFSGILAKAGYVTPK
QIAIDKRVTLAMASLGSIVFMNLSLAHNSVGFYQLSKLACIPVIIVVEYA
LYERIVPLSKLLTVTVIVFGVGVASVSDVTINFIGMILAAVAVTFTSMAQ
ILCSHYQKYLECDSMQLLHSTCPLVTIGMLVFIPFFHNVRELGQAEFSAP
LLTHIFWSCVLALGVNITNFLILGKTSPLAYQVLGHLKATIILILGVVVF
NYQYNAKVIAGTVLALGGVVAYTELGRQKTVG*
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Synonyms
Publications