NO07G02620, NO07G02620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_005855148.1 (ctr9 protein, partial [Nannochloropsis gaditana CCMP526] >EKU21209.1 ctr9 protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 511.9 bits (1317), Expect = 2.800e-141 Identity = 257/332 (77.41%), Postives = 292/332 (87.95%), Query Frame = 0 Query: 1 MGEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSITVPDKAHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLVLDASVSEAFKRANALVTTSVEESRGAQRDLLVAIDMLSRSELASTYAKVKKKVDYLKANQSLARQYVQAEGKRFREDEENKARQ 333 MGE +AAEEL LAI+KQYPS+ +A++KLG+LA QG +A WLG+AR LAPQD+EVAA+CGKVEQD G RDQAQRLFEPLNKEGDPYAMVALGNLYFMNS+TVPDKAHH+GHARVYHTKVLKK+ +NLYAAHGLGLVLAEEFGKV+DARAVLQAVRERSGDKPDEILINI H+FVAQ QR+AAIHCYE+FLKK L+ DGL+VRVLE+++HAHFL R WEKALRAI K H+EP K +LAFNVGL+LDASVSE+FKR+NA TTSV ESR A+RDL VAI +LSR ELA Y KVK+KVDY+KAN LARQYVQAE KRFREDEE++ RQ Sbjct: 405 MGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQ 736
BLAST of NO07G02620 vs. NCBI_GenBank
Match: EWM27070.1 (rna polymerase-associated protein ctr9 [Nannochloropsis gaditana]) HSP 1 Score: 511.9 bits (1317), Expect = 2.800e-141 Identity = 257/332 (77.41%), Postives = 292/332 (87.95%), Query Frame = 0 Query: 1 MGEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSITVPDKAHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLVLDASVSEAFKRANALVTTSVEESRGAQRDLLVAIDMLSRSELASTYAKVKKKVDYLKANQSLARQYVQAEGKRFREDEENKARQ 333 MGE +AAEEL LAI+KQYPS+ +A++KLG+LA QG +A WLG+AR LAPQD+EVAA+CGKVEQD G RDQAQRLFEPLNKEGDPYAMVALGNLYFMNS+TVPDKAHH+GHARVYHTKVLKK+ +NLYAAHGLGLVLAEEFGKV+DARAVLQAVRERSGDKPDEILINI H+FVAQ QR+AAIHCYE+FLKK L+ DGL+VRVLE+++HAHFL R WEKALRAI K H+EP K +LAFNVGL+LDASVSE+FKR+NA TTSV ESR A+RDL VAI +LSR ELA Y KVK+KVDY+KAN LARQYVQAE KRFREDEE++ RQ Sbjct: 784 MGELAAAEELLLAITKQYPSHVSAHIKLGILAHGQGHTKQAGSWLGRARQLAPQDKEVAAVCGKVEQDAGHRDQAQRLFEPLNKEGDPYAMVALGNLYFMNSVTVPDKAHHMGHARVYHTKVLKKDARNLYAAHGLGLVLAEEFGKVEDARAVLQAVRERSGDKPDEILINIAHLFVAQKQRNAAIHCYESFLKKHRLSTDGLHVRVLEYVSHAHFLERSWEKALRAILKALHVEPGKPALAFNVGLILDASVSESFKRSNAQRTTSVSESRSAERDLSVAISVLSRPELAQAYPKVKRKVDYMKANLQLARQYVQAEEKRFREDEESRTRQ 1115
BLAST of NO07G02620 vs. NCBI_GenBank
Match: CBJ49050.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.4 bits (355), Expect = 9.800e-30 Identity = 88/290 (30.34%), Postives = 151/290 (52.07%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPL----NKEGDPYAMVALGNLYFMNSITVPDKAHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAAD-GLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLVLDASVSEAFKRANALVTTSVEESRGAQRDLLVAIDMLS 287 G AA+EL+ A+ ++P+Y +Y++LG++A+ G+ EA W +A + ++ + A G + AQ+ FE + GD YA ++LGN+YF N H+ HA ++ +VLKK+ N ++A+GLG+VLAE+ G +D A+ V VRE S + ++ IN+ H+++AQ + + AI Y+ LKK D L++ ++AHA+F R + +R + K H+ P L +N+ L + ++ ++ E A DL A + S Sbjct: 714 GHHEAAQELHKAVLAEHPTYVNSYLRLGIMARDSGQIHEASKWFKQALEVDGENPNIVAYIGNLHMRNSEWGPAQKKFEKILEMPGLRGDSYANLSLGNIYFSNLEDRTKYEKHLLHAANFYHEVLKKDDANAFSANGLGMVLAEK-GTLDHAKDVFARVREVSAEVLGDVWINLAHVYLAQNKHNEAIRLYQNCLKKFHGGRDPSLHI----YLAHAYFDARQYNDCMRVLLKALHVSPNNLQLWYNLALARETFAVAVLQKEQKGEARTLAEVENAIEDLKGATKLFS 998
BLAST of NO07G02620 vs. NCBI_GenBank
Match: GAA52741.1 (RNA polymerase-associated protein CTR9 homolog [Clonorchis sinensis]) HSP 1 Score: 131.0 bits (328), Expect = 1.300e-26 Identity = 85/255 (33.33%), Postives = 140/255 (54.90%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKE----GDPYAMVALGNLYFM---NSITVPDK-AHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLV 249 G AEE+Y +I Q+PSY Y++LG +A+ +G +A +W A + P +V ++ G + +QAQ+ F+ + ++ D +A ++LGN++ + I DK H A ++ VL +P+N++AAHG+G VLA + G V++AR V VRE + D PD + INI H++V Q Q +AAI YE LKK + + +L+++A A+F ++ + K H++P L FN+ LV Sbjct: 564 GRPDLAEEIYKSILLQHPSYIDCYLRLGCIARDRGMIWDASIWFKDALDIDPDHPDVWSLIGLLHLSKNEAEQAQKKFDRIIRQPTYRADAFARISLGNIWLTTLHHPIRDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHK-GFVNEARDVFAQVREATADFPD-VWINIAHIYVEQKQYTAAIQMYENCLKKFSMQNN---TELLQYLARAYFKAGQLKECKTMLLKAMHVKPWDQLLTFNLALV 813
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_009174146.1 (hypothetical protein T265_09719 [Opisthorchis viverrini] >KER22100.1 hypothetical protein T265_09719 [Opisthorchis viverrini]) HSP 1 Score: 131.0 bits (328), Expect = 1.300e-26 Identity = 85/255 (33.33%), Postives = 140/255 (54.90%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKE----GDPYAMVALGNLYFM---NSITVPDK-AHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLV 249 G AEE+Y +I Q+PSY Y++LG +A+ +G +A +W A + P +V ++ G + +QAQ+ F+ + ++ D +A ++LGN++ + I DK H A ++ VL +P+N++AAHG+G VLA + G V++AR V VRE + D PD + INI H++V Q Q +AAI YE LKK + + +L+++A A+F ++ + K H++P L FN+ LV Sbjct: 564 GRPDLAEEIYKSILLQHPSYIDCYLRLGCIARDRGMIWDASIWFKDALDIDPDHPDVWSLIGLLHLSKNEAEQAQKKFDRIIRQPTYRADAFARISLGNIWLTTLHHPIRDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHK-GFVNEARDVFAQVREATADFPD-VWINIAHIYVEQKQYTAAIQMYENCLKKFSMQNN---TELLQYLARAYFKAGQLKECKTMLLKAMHVKPWDQLLTFNLALV 813
BLAST of NO07G02620 vs. NCBI_GenBank
Match: OON18788.1 (tetratricopeptide repeat protein, partial [Opisthorchis viverrini]) HSP 1 Score: 131.0 bits (328), Expect = 1.300e-26 Identity = 85/255 (33.33%), Postives = 140/255 (54.90%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKE----GDPYAMVALGNLYFM---NSITVPDK-AHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLV 249 G AEE+Y +I Q+PSY Y++LG +A+ +G +A +W A + P +V ++ G + +QAQ+ F+ + ++ D +A ++LGN++ + I DK H A ++ VL +P+N++AAHG+G VLA + G V++AR V VRE + D PD + INI H++V Q Q +AAI YE LKK + + +L+++A A+F ++ + K H++P L FN+ LV Sbjct: 531 GRPDLAEEIYKSILLQHPSYIDCYLRLGCIARDRGMIWDASIWFKDALDIDPDHPDVWSLIGLLHLSKNEAEQAQKKFDRIIRQPTYRADAFARISLGNIWLTTLHHPIRDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHK-GFVNEARDVFAQVREATADFPD-VWINIAHIYVEQKQYTAAIQMYENCLKKFSMQNN---TELLQYLARAYFKAGQLKECKTMLLKAMHVKPWDQLLTFNLALV 780
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_002287483.1 (hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana CCMP1335] >EED94926.1 hypothetical protein THAPSDRAFT_268346 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 130.2 bits (326), Expect = 2.300e-26 Identity = 79/219 (36.07%), Postives = 128/219 (58.45%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKEGDP----YAMVALGNLYFMNSITVPDKAHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHF 217 G A EL+ AI K++PSY +Y++L +A+ G + WL A ++AP + EV + G + L AQ++F+ L + P Y+M++LGN+YF N T + H+ HA ++ ++L K+ N YAA+GLG VLAE G++ A+ V VRE SGD + L+N+GH+++AQ + S A+ Y++++ R A+D VL ++A A+F Sbjct: 388 GRIVPAVELHKAIVKRHPSYVNSYLRLACIARDCGSLKDCSEWLKSAVAVAPGNPEVLTLVGNLHLSLCDWAPAQKVFDQLLIQKVPKVEAYSMLSLGNIYFNNLNTPKKYSKHLQHAADFYRRILSKDNANAYAANGLGTVLAER-GELFKAKEVFNRVREVSGDTILDCLLNLGHIYLAQKKHSEALQMYQSYM-NRTRASDDDEAEVLLYIAFAYF 604
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_012751949.1 (hypothetical protein SAMD00019534_080350 [Acytostelium subglobosum LB1] >GAM24860.1 hypothetical protein SAMD00019534_080350 [Acytostelium subglobosum LB1]) HSP 1 Score: 125.6 bits (314), Expect = 5.600e-25 Identity = 77/253 (30.43%), Postives = 135/253 (53.36%), Query Frame = 0 Query: 1 MGEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPL--NKEGDPYAMVALGNLYFMNSITVPDK-AHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLVLD 251 M F+ A EL++ I ++P+Y Y+++ L +++G EA W +A + P + E ++ G ++ + AQ FE + + DPYA +ALGNLYF I PDK ++ A Y+TK LK P N+YAA+G+G+V A E G + A + +RE + D P + +N+ H+++ + AI Y+ LKK A + + + ++A A+F + + + + + K H+ P +L +N L ++ Sbjct: 528 MNNFTRARELHIGILTEHPTYLDCYLRMSALCRAEGNDFEASEWSKQALLIDPNNAEAWSMFGCLQLSKEQWSFAQNKFEQILETNKHDPYASLALGNLYFQAKIHNPDKFEKYLSLAETYYTKTLKNNPTNIYAANGIGMV-AFERGNITLATDIFVQLRESAVDVP-SVSLNLAHIYMQKRLFDFAIRLYDGCLKKSNNAKEMELMYL--YLAKAYFEAQRYPECKQTLKKALHISPANMALQYNFALAIE 776
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_018649142.1 (putative tpr repeat nuclear phosphoprotein [Schistosoma mansoni] >CCD76269.1 putative tpr repeat nuclear phosphoprotein [Schistosoma mansoni]) HSP 1 Score: 124.0 bits (310), Expect = 1.600e-24 Identity = 81/255 (31.76%), Postives = 137/255 (53.73%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKE----GDPYAMVALGNLYFM---NSITVPDK-AHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIHCYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLV 249 G AEE+Y +I ++PSY Y++LG +A+ +G+ +A +W +A + + + + G + +QAQ+ F+ + ++ D +A + LGN++ + I DK H A ++ VL +P+N++AAHG+G VLA + G V++AR V VRE + D PD + INI H++V Q Q +AAI YE +KK + +L+++A AHF ++ + K H++P L FN+ V Sbjct: 534 GRSDLAEEIYKSILLRHPSYIECYLRLGCIARDRGQIRDASIWFKEALDVDQDNPDAWTLIGLLHLGKNEVEQAQKKFDRIIRQPAYRADAFARICLGNIWLTTLHHPIKDKDKRKRHQDRALSFYKAVLCADPRNIWAAHGIGCVLAHK-GFVNEARDVFAQVREATADFPD-VWINIAHIYVEQKQYTAAIQMYENCIKKFSRQNN---TELLQYLARAHFKAGQLKECKTMLLKARHVKPWDPVLTFNLAFV 783
BLAST of NO07G02620 vs. NCBI_GenBank
Match: XP_014147891.1 (hypothetical protein SARC_13453, partial [Sphaeroforma arctica JP610] >KNC73989.1 hypothetical protein SARC_13453, partial [Sphaeroforma arctica JP610]) HSP 1 Score: 121.7 bits (304), Expect = 8.000e-24 Identity = 91/319 (28.53%), Postives = 152/319 (47.65%), Query Frame = 0 Query: 2 GEFSAAEELYLAISKQYPSYAAAYVKLGLLAQSQGRGPEALMWLGKARSLAPQDREVAAICGKVEQDLGRRDQAQRLFEPLNKEG-------DPYAMVALGNLYFMNSIT--------VPDKAHHIGHARVYHTKVLKKEPKNLYAAHGLGLVLAEEFGKVDDARAVLQAVRERSGDKPDEILINIGHMFVAQGQRSAAIH----CYEAFLKKRPLAADGLYVRVLEFMAHAHFLGRGWEKALRAIAKGFHLEPTKASLAFNVGLVLDASVSEAFKRANALVTTSVEESRGAQRDLLVAIDMLSRSELASTYAKVKKKV 302 GE + AE +Y + K +P+Y +Y++LG + + QGR +A W +A S+ D ++ G + G AQ++FE +NK+ D YA VALG+L+ ++ T A ++ A+ + K LK + +N+YAA+G+G VLAE G V++AR + VRE +GD P I N+ H + Q Q AI C F R + +Y+ + A A+FL + A + + K H+ PT + +N+GL K + T + R A+ + + ++ + Y+K K+ Sbjct: 19 GERATAEAMYKQLVKDHPTYIESYLRLGCMLRDQGRKNKASDWFKEALSVDVSDYRTRSLLGNLHLSKGEIIPAQKMFESINKDSKEKTKREDMYAQVALGSLFHQSASTAKRNDPKGAQKHADYLRRAQDLYAKALKLDGRNMYAANGIGCVLAER-GHVNEARQIFVQVREATGDMP-FIWDNLAHTNLQQKQYVNAIKMLKTCQARFFGGRDV---DVYISI----ARAYFLSNDFAMAAKTLRKALHITPTDSETEYNIGLCEQKVAVAVLKDTKSDTTQLLMAKRSAKMAERIFTMLAQSNDKHTKYSKTLAKM 328 The following BLAST results are available for this feature:
BLAST of NO07G02620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02620 ID=NO07G02620|Name=NO07G02620|organism=Nannochloropsis oceanica|type=gene|length=1875bpback to top protein sequence of NO07G02620.1 >NO07G02620.1-protein ID=NO07G02620.1-protein|Name=NO07G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=625bpback to top Synonyms
Publications
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