NO07G02560, NO07G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_005854512.1 (cral family protein [Nannochloropsis gaditana CCMP526] >EKU21847.1 cral family protein [Nannochloropsis gaditana CCMP526] >EWM27106.1 cral-trio family protein [Nannochloropsis gaditana]) HSP 1 Score: 511.5 bits (1316), Expect = 4.100e-141 Identity = 323/714 (45.24%), Postives = 400/714 (56.02%), Query Frame = 0 Query: 1 MQLRYMAWTLVGGSIMASQGPLLAAADAPSSTMPSLTGGGVMSTLVSVAHACTSKXXXXXXXXXXXXXLSRWSFLKWRRRSTAPAQKTTPWFIPAEMXXXXXXXXXXXXXXXXXXXXXXXXXL----DAPIMMSFGMTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD--ELQGTAKKAIADVRALVDNTEAHIETEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSFLKPRTRNAAATKWMISDDEDSIPCGRSLSSALSVIGGGLPLRRGGSTMGSATAASSSFPSVARSXXXXXXXXXXXXXXXXXTEETVVQEAREGGPTWASTVTEEEEISISXXXXXXSPLSPSSTFLAQDAAVAIEATVCAVAEKAHTAAAAAVVGTTLDEDVKRETELAERFHAETARQVEGLTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDVAQAIVEGNHEKEREEERKLHAFLDYAASKGLHKRRW 709 MQLR +AW LVG S++AS G LLAA+D P TMP+LTG GVMS+L K S WS KWRR+S + A+ TPWFIP E+ DA + T + +++ +A V+++V+ EA EE L KP + A + DDE SIPCGRSLSSALSVIGGGLPLRRGGS AT + SV E ++E EG + + E + I A D V E + + ++ L+E+ + ETELA R AETA++V GL+ ++R ALERVR ALYGP V +R+ AVD+L VCGDRDAM+LSFL RK++DA+ AL+SF+RVI WRM +IE+VFEG RLAR KVEKHR CWPTAFYF++D GDP+FVDRMG+LELA+LR G L + DM+ YY+QTMEGRRRLLFPHLSR+SGR I+ YVSVVDV HFGPQHFGRHAL F+ ++G VHD+ YSDLVKS+YIINAPFFFHKVFHLISCMM+QELKDRLKVLN+++SL ELS+I+P D+A+ IVEG+ ERE ER+LHAFLD AA GLH+RRW Sbjct: 1 MQLRCIAWVLVGASVVASDGMLLAASDGP-PTMPTLTGSGVMSSLXXXXXXXXXKGQRKASALFS----SEWSSFKWRRKS-SQAKSRTPWFIPPELMCVPREKDREGVEAEKRGIDAHAATALSREDADEGLEKATTTSLLEEEVDTATPAGVVSRTEASILEVSSSEIHSHEDRDVKKNMTTTLAGVKSIVEGEEADEREEE------------------------KLREDAEPPSPPRLRPVSKPSAKRAPILRKRREDDELSIPCGRSLSSALSVIGGGLPLRRGGSDTVCATGGERAASSVHSPSTTTTRGIHSAGEVEIDAWEERIEEG-EGALSVTRSTWHYEAVVIEAG--------------ASDGRVEAEGHL-----EVSQGPRLGILDDGLEEE-EGETELAARLRAETAQRVGGLSVEKRAALERVRIALYGPDVDPRRVAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESLRELSQILPPDLARRIVEGDPAGEREGERELHAFLDRAARAGLHRRRW 663
BLAST of NO07G02560 vs. NCBI_GenBank
Match: CBJ30377.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19 Identity = 96/426 (22.54%), Postives = 171/426 (40.14%), Query Frame = 0 Query: 379 AVAEKAHTAAAAAVVGTTLDEDVKRETELAERFHAETARQVEGLTSDQRRALERVREALYGPAV--------CEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTME--------------------------------------------------------------------------------------------------------------------------GRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHF--GRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQS-LVELSKIMPSD 672 A+ E+ AA ++G +D R+ ++A R VE L QR E V+ +G A+ E+ + A++ +A+CGDRD ++L+FL+ +D A +S R +WR ENE +D+F+ ++ K++K+R WPT F+ +D+ G PVF DR+G +L+KLR+ LD +MV + Q ME RRR + LSR++GR + +V+D++ G +H + A+++ I + D YS + S+ I+NAP+ F K + ++ ++++ ++KVL + ++ L +L + +P + Sbjct: 165 AMEEELEAAAIREILGLRSAQD--RKVQVA------ATRAVEALPPTQRECFEDVKAFAFGGAIEGKEGAGLSEEEVEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFKRA-VSPAKMKKYRTHWPTGFH-KQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNMEILKMPENQQYAVLAEMRPLIGELSRLTALDPALAAGQKVVLDMATALDHCEHIIQPDTGAMWLHEELLSPSEEGEQTDREQIVKQLTTLFKLVHPKGLPGLAPGGSEASASSRRQRVQLLMQVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDIFQDNYSGMTCSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLQQLEEYIPKE 580
BLAST of NO07G02560 vs. NCBI_GenBank
Match: KDO65935.1 (hypothetical protein CISIN_1g007451mg [Citrus sinensis]) HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15 Identity = 66/252 (26.19%), Postives = 121/252 (48.02%), Query Frame = 0 Query: 422 LTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAM---------------MLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659 LT RR RV ++ P E A +E AV G R+A+ ML FL+ + +D + + + +++WR EN ++ + + E+ ++ + C+P Y DKEG PV+++R+G ++ +KL ++ + Y+VQ E FP S + RHI S ++++DV FG+ A + I + D Y +++ M+I+NA F V++ ++ + +++VL K Sbjct: 44 LTHSLRRRGRRVSDSRCAPISIEDVRDAAEEKAVNGFRNALIARDMLPSRHDDYHTMLRFLKARKFDIDKTFQMWVEMLNWRKENGVDTIMQD--FVYEEYDEVQSCYPHG-YHGVDKEGRPVYIERLGQIDPSKLMSCTT---VERFLKYHVQGFEKTFSEKFPACSIAAKRHIDSTITILDVQGVNWMSFGKVAHDLVMRIQKIDGDNYPEILHQMFIVNAGSGFKLVWNTAKGFLDPKTTAKIQVLGYK 289
BLAST of NO07G02560 vs. NCBI_GenBank
Match: KDO65936.1 (hypothetical protein CISIN_1g007451mg [Citrus sinensis]) HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15 Identity = 66/252 (26.19%), Postives = 121/252 (48.02%), Query Frame = 0 Query: 422 LTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAM---------------MLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659 LT RR RV ++ P E A +E AV G R+A+ ML FL+ + +D + + + +++WR EN ++ + + E+ ++ + C+P Y DKEG PV+++R+G ++ +KL ++ + Y+VQ E FP S + RHI S ++++DV FG+ A + I + D Y +++ M+I+NA F V++ ++ + +++VL K Sbjct: 44 LTHSLRRRGRRVSDSRCAPISIEDVRDAAEEKAVNGFRNALIARDMLPSRHDDYHTMLRFLKARKFDIDKTFQMWVEMLNWRKENGVDTIMQD--FVYEEYDEVQSCYPHG-YHGVDKEGRPVYIERLGQIDPSKLMSCTT---VERFLKYHVQGFEKTFSEKFPACSIAAKRHIDSTITILDVQGVNWMSFGKVAHDLVMRIQKIDGDNYPEILHQMFIVNAGSGFKLVWNTAKGFLDPKTTAKIQVLGYK 289
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_008869145.1 (hypothetical protein H310_06025 [Aphanomyces invadans] >ETW02540.1 hypothetical protein H310_06025 [Aphanomyces invadans]) HSP 1 Score: 93.6 bits (231), Expect = 2.700e-15 Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 0 Query: 451 DELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVL 656 D L V G DA +L +L+ +NY+ ++K ++WR E ++ + L EKV R+ P + D++G+ V+V+R+G L+ +L K + +++ V Y++Q E + + F S GR + + D+ + G F + F+ A+ D Y D + ++I+NAPFFF + LI +N + ++ L Sbjct: 50 DGLVVPGFLDATLLRYLEARNYNESESMKMLADTMTWRKEFQVATIM-ARPLPPEKVAALRKYHPQGEHGV-DRDGNVVYVERIGHLDAEQLLK---HVTLEEAVHYHIQKYELQHHVTFKGASATQGRVVNKMTVIYDLQNIGLHTFKKVVFDFVKETSAIGQDHYPDTLSKVFIVNAPFFFFTTWKLIEVFLNPITRKKIHFL 249
BLAST of NO07G02560 vs. NCBI_GenBank
Match: ORX75906.1 (hypothetical protein BCR32DRAFT_284756 [Anaeromyces robustus]) HSP 1 Score: 93.6 bits (231), Expect = 2.700e-15 Identity = 56/199 (28.14%), Postives = 104/199 (52.26%), Query Frame = 0 Query: 460 DAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659 D ++L FL+ +N+D + F WR E +I+++ + E E+ + +P FY DK G P++++++G L+L KL + + M+ ++V E FP S ++G HI + +++D+ G F + A SF+ A A+ D Y +++ M+IINAP F + LI+ +++ ++K+L K Sbjct: 51 DYLLLRFLRARNFDLTKTYEMFSNCEKWRKEIKIKELCKNFEFPEE--EEVHKLYP-RFYHKVDKYGRPIYIEQLGPLDLKKLFNVTTE---EKMINHHVYEYEKLIHTRFPACSNRAGYHIETSCTIMDLKKVGLMQFAK-AFSFIKASSAIAQDYYPEMLGQMFIINAPMLFTSTWKLITPLLDPVTVKKIKILGGK 242
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_009826765.1 (hypothetical protein H257_04086 [Aphanomyces astaci] >ETV83335.1 hypothetical protein H257_04086 [Aphanomyces astaci]) HSP 1 Score: 92.4 bits (228), Expect = 6.000e-15 Identity = 51/201 (25.37%), Postives = 101/201 (50.25%), Query Frame = 0 Query: 455 VCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVL 656 V G D+ + +L+ +NY ++K ++WR ++++ + E LA+EKV+ R+ P + D++G+ ++V+RMG L+ L K + + + V Y++Q E + + F + GR + + D+ + G F + F+ A+ D Y D + ++I+NAPFFF + L+ +N + ++ L Sbjct: 36 VDGFLDSTLTRYLEARNYVENDSMKMITETLAWRQQHQVATIME-RPLAQEKVDALRKYHPQGEHGV-DRDGNILYVERMGYLDAEHLMK---HVTLDEAVHYHIQKYEFQHHVTFKDATAAQGRVVNKMTVIYDMQNVGLHTFKKVVFDFVKQTSAIGQDHYPDTLSKVFIVNAPFFFFTTWKLVEVFLNPTTRKKIHFL 231
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_012841843.1 (PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Erythranthe guttata] >EYU33746.1 hypothetical protein MIMGU_mgv1a002979mg [Erythranthe guttata]) HSP 1 Score: 92.0 bits (227), Expect = 7.800e-15 Identity = 62/210 (29.52%), Postives = 109/210 (51.90%), Query Frame = 0 Query: 429 ALERVREALYGPAVCEKRIRAVDE--LAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKV 637 ++E +R+ AVCE R + +D L V D +L FL+ +++D ++ +E ++ WR E + + + + E++E+ E +P Y D+EG PV+++R+G +KL + I+ V Y+VQ E FP S + R I S +++DV G ++F A S LAA+ + ++ Y + + MY++NA F KV Sbjct: 64 SIEDLRDPREESAVCELRQKLIDSDLLPVIHDDYHTLLRFLKARDFDISKTIQMWEELLDWRKEFGADTILQDFKF--EELEEVLEYYPQG-YHGVDREGRPVYIERLGKAHPSKLMR---VTSIERYVKYHVQEFERAINEKFPACSIAAKRRICSSTTILDVHGLGIKNFTTTAASLLAAVTKIDNNYYPETLHRMYVVNAGTGFKKV 267
BLAST of NO07G02560 vs. NCBI_GenBank
Match: OMO95757.1 (Cellular retinaldehyde binding/alpha-tocopherol transport, partial [Corchorus olitorius]) HSP 1 Score: 91.3 bits (225), Expect = 1.300e-14 Identity = 64/246 (26.02%), Postives = 121/246 (49.19%), Query Frame = 0 Query: 429 ALERVREALYGPAV--CEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDV 673 ++E +R+A AV + + A D+L D +L FL+ + +D + ++ +E +++WR EN ++ + + ++ E+ + C+P Y DK+G PV+++R+G +E AKL K + + Y+VQ E FP S + RHI + +++DV FG+ A + + + D Y + + MYI+NA F +++ + ++ ++ VL K L I PS + Sbjct: 27 SIEDIRDAEEEKAVRAFRQALLARDQLPPRHDDYHTLLRFLKARKFDLDKTIQMWEDMLNWRKENGVDTIIQD--FVYDEYEEVQHCYPHG-YHGVDKQGRPVYIERLGKIEPAKLMK---VTTVDRFLKYHVQGFEKAFMEKFPACSIAAKRHIDNTTTILDVQGLNWMSFGKVAHDLVMRMQKIDGDNYPETLHQMYIVNAGSGFKLLWNTVKGFLDPRTTAKIHVLGNKFHNKLLEIIDPSQL 266
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_001454548.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK87151.1 unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 90.9 bits (224), Expect = 1.700e-14 Identity = 57/229 (24.89%), Postives = 117/229 (51.09%), Query Frame = 0 Query: 460 DAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDVAQAIVEGNHEKEREEE 689 D +L FL+ + +D F I WR EN+++++ E++ + R +P ++ T DK G P++++R+G+L+L KL E+ + Q ++ YY+Q+ E + +FP S+ G I +++D+ + + +F+ V + Y +++ MYI+NAP F ++ +I ++++ K+++ +L EL K + D + GN + E ++ Sbjct: 42 DPYLLRFLRARKFDINKTQLMFNDFIKWRKENDVDNIM---TYMFEELPQVRTYYPHGYHKT-DKMGRPLYIERIGMLQLNKL--FEITSE-QRLIKYYIQSYELLLKRIFPACSQAKGTRIDQTFTILDLKGGSMKMVSKQVYNFIQLASNVGQNNYPEILGKMYIVNAPMMFTGIWAMIKIWLDEKTKNKITILGSSYK-DELLKHIDIDNLPDFLGGNSKCENTDD 262 The following BLAST results are available for this feature:
BLAST of NO07G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02560 ID=NO07G02560|Name=NO07G02560|organism=Nannochloropsis oceanica|type=gene|length=2568bpback to top protein sequence of NO07G02560.1 >NO07G02560.1-protein ID=NO07G02560.1-protein|Name=NO07G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=714bpback to top Synonyms
Publications
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