NO07G02560, NO07G02560 (gene) Nannochloropsis oceanica

Overview
NameNO07G02560
Unique NameNO07G02560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2568
Alignment locationchr7:744098..746665 +

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Properties
Property NameValue
DescriptionCral-trio family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:744098..746665 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036273CRAL/TRIO_N_dom_sf
IPR036865CRAL-TRIO_dom_sf
IPR001251CRAL-TRIO_dom
Homology
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_005854512.1 (cral family protein [Nannochloropsis gaditana CCMP526] >EKU21847.1 cral family protein [Nannochloropsis gaditana CCMP526] >EWM27106.1 cral-trio family protein [Nannochloropsis gaditana])

HSP 1 Score: 511.5 bits (1316), Expect = 4.100e-141
Identity = 323/714 (45.24%), Postives = 400/714 (56.02%), Query Frame = 0
Query:    1 MQLRYMAWTLVGGSIMASQGPLLAAADAPSSTMPSLTGGGVMSTLVSVAHACTSKXXXXXXXXXXXXXLSRWSFLKWRRRSTAPAQKTTPWFIPAEMXXXXXXXXXXXXXXXXXXXXXXXXXL----DAPIMMSFGMTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD--ELQGTAKKAIADVRALVDNTEAHIETEETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSFLKPRTRNAAATKWMISDDEDSIPCGRSLSSALSVIGGGLPLRRGGSTMGSATAASSSFPSVARSXXXXXXXXXXXXXXXXXTEETVVQEAREGGPTWASTVTEEEEISISXXXXXXSPLSPSSTFLAQDAAVAIEATVCAVAEKAHTAAAAAVVGTTLDEDVKRETELAERFHAETARQVEGLTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDVAQAIVEGNHEKEREEERKLHAFLDYAASKGLHKRRW 709
            MQLR +AW LVG S++AS G LLAA+D P  TMP+LTG GVMS+L         K              S WS  KWRR+S + A+  TPWFIP E+                              DA   +    T                                   +  +++      +A V+++V+  EA    EE                                     L    KP  + A   +    DDE SIPCGRSLSSALSVIGGGLPLRRGGS    AT    +  SV                      E  ++E  EG  +   +    E + I                 A D  V  E  +     +        ++   L+E+ + ETELA R  AETA++V GL+ ++R ALERVR ALYGP V  +R+ AVD+L VCGDRDAM+LSFL RK++DA+ AL+SF+RVI WRM  +IE+VFEG RLAR KVEKHR CWPTAFYF++D  GDP+FVDRMG+LELA+LR G   L + DM+ YY+QTMEGRRRLLFPHLSR+SGR I+ YVSVVDV HFGPQHFGRHAL F+ ++G VHD+ YSDLVKS+YIINAPFFFHKVFHLISCMM+QELKDRLKVLN+++SL ELS+I+P D+A+ IVEG+   ERE ER+LHAFLD AA  GLH+RRW
Sbjct:    1 MQLRCIAWVLVGASVVASDGMLLAASDGP-PTMPTLTGSGVMSSLXXXXXXXXXKGQRKASALFS----SEWSSFKWRRKS-SQAKSRTPWFIPPELMCVPREKDREGVEAEKRGIDAHAATALSREDADEGLEKATTTSLLEEEVDTATPAGVVSRTEASILEVSSSEIHSHEDRDVKKNMTTTLAGVKSIVEGEEADEREEE------------------------KLREDAEPPSPPRLRPVSKPSAKRAPILRKRREDDELSIPCGRSLSSALSVIGGGLPLRRGGSDTVCATGGERAASSVHSPSTTTTRGIHSAGEVEIDAWEERIEEG-EGALSVTRSTWHYEAVVIEAG--------------ASDGRVEAEGHL-----EVSQGPRLGILDDGLEEE-EGETELAARLRAETAQRVGGLSVEKRAALERVRIALYGPDVDPRRVAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESLRELSQILPPDLARRIVEGDPAGEREGERELHAFLDRAARAGLHRRRW 663          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: CBJ30377.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 107.8 bits (268), Expect = 1.400e-19
Identity = 96/426 (22.54%), Postives = 171/426 (40.14%), Query Frame = 0
Query:  379 AVAEKAHTAAAAAVVGTTLDEDVKRETELAERFHAETARQVEGLTSDQRRALERVREALYGPAV--------CEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTME--------------------------------------------------------------------------------------------------------------------------GRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHF--GRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQS-LVELSKIMPSD 672
            A+ E+   AA   ++G    +D  R+ ++A        R VE L   QR   E V+   +G A+         E+ + A++ +A+CGDRD ++L+FL+   +D   A +S  R  +WR ENE +D+F+   ++  K++K+R  WPT F+  +D+ G PVF DR+G  +L+KLR+    LD  +MV  + Q ME                                                                                                                           RRR +   LSR++GR +    +V+D++  G +H    + A+++   I  +  D YS +  S+ I+NAP+ F K + ++   ++++   ++KVL + ++ L +L + +P +
Sbjct:  165 AMEEELEAAAIREILGLRSAQD--RKVQVA------ATRAVEALPPTQRECFEDVKAFAFGGAIEGKEGAGLSEEEVEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFKRA-VSPAKMKKYRTHWPTGFH-KQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNMEILKMPENQQYAVLAEMRPLIGELSRLTALDPALAAGQKVVLDMATALDHCEHIIQPDTGAMWLHEELLSPSEEGEQTDREQIVKQLTTLFKLVHPKGLPGLAPGGSEASASSRRQRVQLLMQVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDIFQDNYSGMTCSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLQQLEEYIPKE 580          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: KDO65935.1 (hypothetical protein CISIN_1g007451mg [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15
Identity = 66/252 (26.19%), Postives = 121/252 (48.02%), Query Frame = 0
Query:  422 LTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAM---------------MLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659
            LT   RR   RV ++   P   E    A +E AV G R+A+               ML FL+ + +D +   + +  +++WR EN ++ + +      E+ ++ + C+P   Y   DKEG PV+++R+G ++ +KL        ++  + Y+VQ  E      FP  S  + RHI S ++++DV       FG+ A   +  I  +  D Y +++  M+I+NA   F  V++     ++ +   +++VL  K
Sbjct:   44 LTHSLRRRGRRVSDSRCAPISIEDVRDAAEEKAVNGFRNALIARDMLPSRHDDYHTMLRFLKARKFDIDKTFQMWVEMLNWRKENGVDTIMQD--FVYEEYDEVQSCYPHG-YHGVDKEGRPVYIERLGQIDPSKLMSCTT---VERFLKYHVQGFEKTFSEKFPACSIAAKRHIDSTITILDVQGVNWMSFGKVAHDLVMRIQKIDGDNYPEILHQMFIVNAGSGFKLVWNTAKGFLDPKTTAKIQVLGYK 289          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: KDO65936.1 (hypothetical protein CISIN_1g007451mg [Citrus sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15
Identity = 66/252 (26.19%), Postives = 121/252 (48.02%), Query Frame = 0
Query:  422 LTSDQRRALERVREALYGPAVCEKRIRAVDELAVCGDRDAM---------------MLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659
            LT   RR   RV ++   P   E    A +E AV G R+A+               ML FL+ + +D +   + +  +++WR EN ++ + +      E+ ++ + C+P   Y   DKEG PV+++R+G ++ +KL        ++  + Y+VQ  E      FP  S  + RHI S ++++DV       FG+ A   +  I  +  D Y +++  M+I+NA   F  V++     ++ +   +++VL  K
Sbjct:   44 LTHSLRRRGRRVSDSRCAPISIEDVRDAAEEKAVNGFRNALIARDMLPSRHDDYHTMLRFLKARKFDIDKTFQMWVEMLNWRKENGVDTIMQD--FVYEEYDEVQSCYPHG-YHGVDKEGRPVYIERLGQIDPSKLMSCTT---VERFLKYHVQGFEKTFSEKFPACSIAAKRHIDSTITILDVQGVNWMSFGKVAHDLVMRIQKIDGDNYPEILHQMFIVNAGSGFKLVWNTAKGFLDPKTTAKIQVLGYK 289          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_008869145.1 (hypothetical protein H310_06025 [Aphanomyces invadans] >ETW02540.1 hypothetical protein H310_06025 [Aphanomyces invadans])

HSP 1 Score: 93.6 bits (231), Expect = 2.700e-15
Identity = 56/205 (27.32%), Postives = 102/205 (49.76%), Query Frame = 0
Query:  451 DELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVL 656
            D L V G  DA +L +L+ +NY+   ++K     ++WR E ++  +     L  EKV   R+  P   +   D++G+ V+V+R+G L+  +L K    + +++ V Y++Q  E +  + F   S   GR +     + D+ + G   F +    F+    A+  D Y D +  ++I+NAPFFF   + LI   +N   + ++  L
Sbjct:   50 DGLVVPGFLDATLLRYLEARNYNESESMKMLADTMTWRKEFQVATIM-ARPLPPEKVAALRKYHPQGEHGV-DRDGNVVYVERIGHLDAEQLLK---HVTLEEAVHYHIQKYELQHHVTFKGASATQGRVVNKMTVIYDLQNIGLHTFKKVVFDFVKETSAIGQDHYPDTLSKVFIVNAPFFFFTTWKLIEVFLNPITRKKIHFL 249          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: ORX75906.1 (hypothetical protein BCR32DRAFT_284756 [Anaeromyces robustus])

HSP 1 Score: 93.6 bits (231), Expect = 2.700e-15
Identity = 56/199 (28.14%), Postives = 104/199 (52.26%), Query Frame = 0
Query:  460 DAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRK 659
            D ++L FL+ +N+D     + F     WR E +I+++ +      E  E+  + +P  FY   DK G P++++++G L+L KL     +   + M+ ++V   E      FP  S ++G HI +  +++D+   G   F + A SF+ A  A+  D Y +++  M+IINAP  F   + LI+ +++     ++K+L  K
Sbjct:   51 DYLLLRFLRARNFDLTKTYEMFSNCEKWRKEIKIKELCKNFEFPEE--EEVHKLYP-RFYHKVDKYGRPIYIEQLGPLDLKKLFNVTTE---EKMINHHVYEYEKLIHTRFPACSNRAGYHIETSCTIMDLKKVGLMQFAK-AFSFIKASSAIAQDYYPEMLGQMFIINAPMLFTSTWKLITPLLDPVTVKKIKILGGK 242          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_009826765.1 (hypothetical protein H257_04086 [Aphanomyces astaci] >ETV83335.1 hypothetical protein H257_04086 [Aphanomyces astaci])

HSP 1 Score: 92.4 bits (228), Expect = 6.000e-15
Identity = 51/201 (25.37%), Postives = 101/201 (50.25%), Query Frame = 0
Query:  455 VCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVL 656
            V G  D+ +  +L+ +NY    ++K     ++WR ++++  + E   LA+EKV+  R+  P   +   D++G+ ++V+RMG L+   L K    + + + V Y++Q  E +  + F   +   GR +     + D+ + G   F +    F+    A+  D Y D +  ++I+NAPFFF   + L+   +N   + ++  L
Sbjct:   36 VDGFLDSTLTRYLEARNYVENDSMKMITETLAWRQQHQVATIME-RPLAQEKVDALRKYHPQGEHGV-DRDGNILYVERMGYLDAEHLMK---HVTLDEAVHYHIQKYEFQHHVTFKDATAAQGRVVNKMTVIYDMQNVGLHTFKKVVFDFVKQTSAIGQDHYPDTLSKVFIVNAPFFFFTTWKLVEVFLNPTTRKKIHFL 231          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_012841843.1 (PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Erythranthe guttata] >EYU33746.1 hypothetical protein MIMGU_mgv1a002979mg [Erythranthe guttata])

HSP 1 Score: 92.0 bits (227), Expect = 7.800e-15
Identity = 62/210 (29.52%), Postives = 109/210 (51.90%), Query Frame = 0
Query:  429 ALERVREALYGPAVCEKRIRAVDE--LAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKV 637
            ++E +R+     AVCE R + +D   L V  D    +L FL+ +++D    ++ +E ++ WR E   + + +  +   E++E+  E +P   Y   D+EG PV+++R+G    +KL +      I+  V Y+VQ  E      FP  S  + R I S  +++DV   G ++F   A S LAA+  + ++ Y + +  MY++NA   F KV
Sbjct:   64 SIEDLRDPREESAVCELRQKLIDSDLLPVIHDDYHTLLRFLKARDFDISKTIQMWEELLDWRKEFGADTILQDFKF--EELEEVLEYYPQG-YHGVDREGRPVYIERLGKAHPSKLMR---VTSIERYVKYHVQEFERAINEKFPACSIAAKRRICSSTTILDVHGLGIKNFTTTAASLLAAVTKIDNNYYPETLHRMYVVNAGTGFKKV 267          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: OMO95757.1 (Cellular retinaldehyde binding/alpha-tocopherol transport, partial [Corchorus olitorius])

HSP 1 Score: 91.3 bits (225), Expect = 1.300e-14
Identity = 64/246 (26.02%), Postives = 121/246 (49.19%), Query Frame = 0
Query:  429 ALERVREALYGPAV--CEKRIRAVDELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDV 673
            ++E +R+A    AV    + + A D+L    D    +L FL+ + +D +  ++ +E +++WR EN ++ + +      ++ E+ + C+P   Y   DK+G PV+++R+G +E AKL K      +   + Y+VQ  E      FP  S  + RHI +  +++DV       FG+ A   +  +  +  D Y + +  MYI+NA   F  +++ +   ++     ++ VL  K     L  I PS +
Sbjct:   27 SIEDIRDAEEEKAVRAFRQALLARDQLPPRHDDYHTLLRFLKARKFDLDKTIQMWEDMLNWRKENGVDTIIQD--FVYDEYEEVQHCYPHG-YHGVDKQGRPVYIERLGKIEPAKLMK---VTTVDRFLKYHVQGFEKAFMEKFPACSIAAKRHIDNTTTILDVQGLNWMSFGKVAHDLVMRMQKIDGDNYPETLHQMYIVNAGSGFKLLWNTVKGFLDPRTTAKIHVLGNKFHNKLLEIIDPSQL 266          
BLAST of NO07G02560 vs. NCBI_GenBank
Match: XP_001454548.1 (hypothetical protein [Paramecium tetraurelia strain d4-2] >CAK87151.1 unnamed protein product [Paramecium tetraurelia])

HSP 1 Score: 90.9 bits (224), Expect = 1.700e-14
Identity = 57/229 (24.89%), Postives = 117/229 (51.09%), Query Frame = 0
Query:  460 DAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGGRLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLDIQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGRHALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKDRLKVLNRKQSLVELSKIMPSDVAQAIVEGNHEKEREEE 689
            D  +L FL+ + +D       F   I WR EN+++++        E++ + R  +P  ++ T DK G P++++R+G+L+L KL   E+  + Q ++ YY+Q+ E   + +FP  S+  G  I    +++D+     +   +   +F+     V  + Y +++  MYI+NAP  F  ++ +I   ++++ K+++ +L       EL K +  D     + GN + E  ++
Sbjct:   42 DPYLLRFLRARKFDINKTQLMFNDFIKWRKENDVDNIM---TYMFEELPQVRTYYPHGYHKT-DKMGRPLYIERIGMLQLNKL--FEITSE-QRLIKYYIQSYELLLKRIFPACSQAKGTRIDQTFTILDLKGGSMKMVSKQVYNFIQLASNVGQNNYPEILGKMYIVNAPMMFTGIWAMIKIWLDEKTKNKITILGSSYK-DELLKHIDIDNLPDFLGGNSKCENTDD 262          
The following BLAST results are available for this feature:
BLAST of NO07G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854512.14.100e-14145.24cral family protein [Nannochloropsis gaditana CCMP... [more]
CBJ30377.11.400e-1922.54conserved unknown protein [Ectocarpus siliculosus][more]
KDO65935.12.100e-1526.19hypothetical protein CISIN_1g007451mg [Citrus sine... [more]
KDO65936.12.100e-1526.19hypothetical protein CISIN_1g007451mg [Citrus sine... [more]
XP_008869145.12.700e-1527.32hypothetical protein H310_06025 [Aphanomyces invad... [more]
ORX75906.12.700e-1528.14hypothetical protein BCR32DRAFT_284756 [Anaeromyce... [more]
XP_009826765.16.000e-1525.37hypothetical protein H257_04086 [Aphanomyces astac... [more]
XP_012841843.17.800e-1529.52PREDICTED: phosphatidylinositol/phosphatidylcholin... [more]
OMO95757.11.300e-1426.02Cellular retinaldehyde binding/alpha-tocopherol tr... [more]
XP_001454548.11.700e-1424.89hypothetical protein [Paramecium tetraurelia strai... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000603NSK000603Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02560.1NO07G02560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580837gene_2587Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100046g7gene3433Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02560.1NO07G02560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02560 ID=NO07G02560|Name=NO07G02560|organism=Nannochloropsis oceanica|type=gene|length=2568bp
ATGCAGCTCCGATACATGGCCTGGACCCTTGTTGGGGGCTCCATCATGGC
CAGCCAGGGACCCTTATTAGCTGCGGCGGATGCCCCTTCTTCGACCATGC
CCTCCTTGACAGGGGGCGGGGTGATGTCAACCCTCGTCTCGGTCGCGCAT
GCATGTACAAGTAAGGAGGCATCGTCGTCGCCGCCGCCGTTGTCATCGTC
CACCTTATCACGATGGTCCTTTCTTAAGTGGCGAAGAAGATCTACGGCAC
CTGCGCAAAAGACAACGCCGTGGTTTATCCCTGCTGAAATGATGCAAGAG
GAGGTCGGAGAGGGAAGAGGCGGGGGAACAACAGCAGCAGCAATGCAAGA
GGAAGAAGGAAAAGAGCTTGACGCACCAATAATGATGTCTTTTGGTATGA
CGGAAAAAGATAATATCTCAACGACGACGACCACTCGGTTTGGAAGCAGC
ATGCTGGAGTTGTGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGTGGCGG
GATGGCAGACGAATTGCAGGGGACTGCCAAAAAGGCGATTGCCGACGTTC
GAGCTCTAGTAGACAACACCGAGGCCCACATAGAGACAGAGGAAACGGCG
GAGGAAGAGGCCTGTGCAGCAGCAGCGACGGAAGCCTCTGCAGCAGCAGC
AGTGACGGAAGCTGCTGCACGAGCGGCTGCTCCTGCTTCTCCAACACCAA
CAACGCTGACATCCTTTCTTAAGCCCAGGACGCGAAACGCCGCGGCAACC
AAATGGATGATTTCTGATGACGAGGATTCCATCCCGTGCGGTCGTTCGCT
GTCGTCTGCATTGAGTGTGATAGGTGGTGGATTACCTCTACGAAGGGGAG
GGAGCACGATGGGATCTGCCACCGCCGCCTCCTCCTCCTTTCCCTCTGTC
GCCCGTTCTATGTCCAGCACATATTTTAGCTCTGCCAGCACAATGACCAA
GGTGTATCATACTGAGGAGACGGTGGTGCAGGAAGCGAGGGAGGGAGGGC
CGACGTGGGCGAGCACCGTTACCGAGGAGGAGGAGATTTCCATTTCGACG
ACCGCTACATCATCCTCCCCTCTCTCCCCCTCTTCTACTTTCCTTGCTCA
AGATGCAGCAGTGGCTATAGAGGCAACTGTATGTGCAGTTGCAGAAAAGG
CGCACACTGCTGCTGCTGCTGCTGTTGTTGGCACCACTCTCGACGAAGAC
GTCAAACGTGAGACAGAGCTGGCAGAGCGATTCCACGCCGAGACGGCGAG
GCAGGTGGAGGGCCTGACGTCGGACCAGAGGAGAGCATTGGAAAGAGTCA
GAGAGGCATTGTACGGCCCAGCTGTGTGTGAGAAGAGGATAAGAGCAGTG
GACGAGCTGGCGGTGTGCGGGGACCGAGATGCGATGATGTTGTCGTTTTT
GCAACGAAAGAATTATGATGCGGAGGTGGCTCTCAAGAGTTTTGAGAGAG
TTATCAGCTGGAGAATGGAAAATGAGATTGAGGATGTTTTTGAGGGAGGG
CGGCTGGCGCGGGAGAAGGTGGAGAAGCATCGGGAGTGTTGGCCAACGGC
ATTCTATTTCACAAAGGACAAGGAGGGGGACCCAGTGTTTGTGGACCGAA
TGGGGATTTTGGAACTGGCAAAGCTGAGGAAGGGAGAGGTGCAGTTGGAT
ATACAGGACATGGTGTTGTATTATGTCCAGACGATGGAGGGGAGGAGGAG
gtgagggagagagggagggagggaggcagaaggggggagaggagattgtc
atctggtctgattctgtcgacgctgccgaacctcaacagtcctccccccc
acgatgtaccacatactcgccccccaccccccccatacgcatttgtctcg
tctcatgacaatcgacggagcgggcgtatccttaccctgcacgtcacttt
cgcgggcgtttccaactgtggtctcacaccctccttccctctcttcatcc
ctccctgtctgctgtctctacagGCTCCTTTTTCCCCATCTCAGCCGGCA
GAGCGGGCGTCACATCACCTCCTACGTCAGTGTCGTGGATGTCTCTCACT
TTGGTCCACAGCATTTCGGTCGGCACGCCCTCTCCTTCCTCGCGGCCATT
GGCGCCGTGCATGACGACACCTATTCCGATCTGGTCAAGTCAATgtatgt
gtgtgttttgtctgttcctgtgactactttatctttccttttttcttctc
tgttgcttcttttatgcatgggggttttggtggccaattgcaagcaaata
tttcctccattctttctttcctccttccctccccccccccaccacagGTA
TATTATCAACGCGCCGTTCTTCTTCCATAAAGTATTCCATCTCATTTCAT
GCATGATGAACCAAGAGCTCAAAGACCGGCTGAAGGTGCTCAACCGAAAA
CAGAGTTTGGTAGAATTATCAAAAATCATGCCGAGCGATGTAGCGCAGGC
CATCGTGGAGGGGAATCATGAAAAGGAGAGGGAGGAGGAGAGGAAGTTGC
ATGCGTTTTTGGATTATGCGGCGAGTAAGGGTCTGCATAAGAGAAGGTGG
GGCTTGGAAGATGCATAG
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protein sequence of NO07G02560.1

>NO07G02560.1-protein ID=NO07G02560.1-protein|Name=NO07G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=714bp
MQLRYMAWTLVGGSIMASQGPLLAAADAPSSTMPSLTGGGVMSTLVSVAH
ACTSKEASSSPPPLSSSTLSRWSFLKWRRRSTAPAQKTTPWFIPAEMMQE
EVGEGRGGGTTAAAMQEEEGKELDAPIMMSFGMTEKDNISTTTTTRFGSS
MLELCNSSSSSSSSSGGMADELQGTAKKAIADVRALVDNTEAHIETEETA
EEEACAAAATEASAAAAVTEAAARAAAPASPTPTTLTSFLKPRTRNAAAT
KWMISDDEDSIPCGRSLSSALSVIGGGLPLRRGGSTMGSATAASSSFPSV
ARSMSSTYFSSASTMTKVYHTEETVVQEAREGGPTWASTVTEEEEISIST
TATSSSPLSPSSTFLAQDAAVAIEATVCAVAEKAHTAAAAAVVGTTLDED
VKRETELAERFHAETARQVEGLTSDQRRALERVREALYGPAVCEKRIRAV
DELAVCGDRDAMMLSFLQRKNYDAEVALKSFERVISWRMENEIEDVFEGG
RLAREKVEKHRECWPTAFYFTKDKEGDPVFVDRMGILELAKLRKGEVQLD
IQDMVLYYVQTMEGRRRLLFPHLSRQSGRHITSYVSVVDVSHFGPQHFGR
HALSFLAAIGAVHDDTYSDLVKSMYIINAPFFFHKVFHLISCMMNQELKD
RLKVLNRKQSLVELSKIMPSDVAQAIVEGNHEKEREEERKLHAFLDYAAS
KGLHKRRWGLEDA*
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Synonyms
Publications