NO07G01950, NO07G01950 (gene) Nannochloropsis oceanica

Overview
NameNO07G01950
Unique NameNO07G01950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1950
Alignment locationchr7:569015..570964 -

Link to JBrowse

Properties
Property NameValue
DescriptionTubby-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:569015..570964 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025659Tubby_C-like
IPR000007Tubby_C
Homology
BLAST of NO07G01950 vs. NCBI_GenBank
Match: EWM27227.1 (tubby-like protein [Nannochloropsis gaditana])

HSP 1 Score: 471.9 bits (1213), Expect = 2.000e-129
Identity = 239/394 (60.66%), Postives = 276/394 (70.05%), Query Frame = 0
Query:    1 MADMHSTSAAGELEELMQDTVKFIGGVADKLWTAGTSAKDMLLDGEKKGDGNKSKERSSLGFYECNGVMETKSFEDLDMLVRTKAGESAQLAWHQILAPNARQLHPFQLDDFTDIPFSNFFCPVFLSSLLTSQESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVDDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVGDLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICMMAGQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI 395
            MA  H  SA+GELE L+Q TV   GGVADKLW A +  ++   +  K G  N          ++ N   + K+FEDLD+L                                                     ESGHAREYIT+ECLLPCPT+K+WSTCNV+K+GK+ FRMYLDE   RF+LSAKRVGDSF+ISQYESFP+S++ VP++  CAVLRTCSEG+FKLFLNGCEACD+K DKYTCGSG   D+RQLLAEINHSV+RVKEANADMRCLS+KLP++HED+Q+R+VWCPRM Q RR      K  H RL NKLPEWNEALQSLVLRFNKGRVLAPSAKNFLIC + GQD  EGVLQFGKTRKRRYALDFRHP+SPLQAFGICLS F WN+
Sbjct:    1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEA-------FDSNFKKDIKTFEDLDLL-----------------------------------------------------ESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVWCPRMEQARRSNNAELKTRHFRLHNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLIC-LDGQDNGEGVLQFGKTRKRRYALDFRHPVSPLQAFGICLSFFNWNV 333          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: EWM27228.1 (tubby-like protein [Nannochloropsis gaditana])

HSP 1 Score: 306.2 bits (783), Expect = 1.500e-79
Identity = 157/291 (53.95%), Postives = 191/291 (65.64%), Query Frame = 0
Query:    1 MADMHSTSAAGELEELMQDTVKFIGGVADKLWTAGTSAKDMLLDGEKKGDGNKSKERSSLGFYECNGVMETKSFEDLDMLVRTKAGESAQLAWHQILAPNARQLHPFQLDDFTDIPFSNFFCPVFLSSLLTSQESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVDDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVW 292
            MA  H  SA+GELE L+Q TV   GGVADKLW A +  ++   +  K G  N          ++ N   + K+FEDLD+L                                                     ESGHAREYIT+ECLLPCPT+K+WSTCNV+K+GK+ FRMYLDE   RF+LSAKRVGDSF+ISQYESFP+S++ VP++  CAVLRTCSEG+FKLFLNGCEACD+K DKYTCGSG   D+RQLLAEINHSV+RVKEANADMRCLS+KLP++HED+Q+R+VW
Sbjct:    1 MATQHLASASGELEGLVQSTVNLFGGVADKLWPAKSRNQEKQAEIGKVGALNSEA-------FDSNFKKDIKTFEDLDLL-----------------------------------------------------ESGHAREYITEECLLPCPTVKKWSTCNVIKNGKSTFRMYLDEAQPRFVLSAKRVGDSFFISQYESFPESINGVPEVSSCAVLRTCSEGYFKLFLNGCEACDKKADKYTCGSGHSFDNRQLLAEINHSVKRVKEANADMRCLSVKLPEVHEDQQTRDVW 231          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: XP_008910583.1 (hypothetical protein PPTG_15284 [Phytophthora parasitica INRA-310] >ETI39573.1 hypothetical protein F443_14842 [Phytophthora parasitica P1569] >ETK79741.1 hypothetical protein L915_14421 [Phytophthora parasitica] >ETL33165.1 hypothetical protein L916_14324 [Phytophthora parasitica] >ETL86440.1 hypothetical protein L917_14125 [Phytophthora parasitica] >ETM39585.1 hypothetical protein L914_14271 [Phytophthora parasitica] >ETN04108.1 hypothetical protein PPTG_15284 [Phytophthora parasitica INRA-310] >ETO68312.1 hypothetical protein F444_14837 [Phytophthora parasitica P1976] >ETP09454.1 hypothetical protein F441_14676 [Phytophthora parasitica CJ01A1] >ETP37510.1 hypothetical protein F442_14684 [Phytophthora parasitica P10297] >KUF88345.1 king tubby 1 protein [Phytophthora nicotianae] >KUF90284.1 king tubby 1 protein [Phytophthora nicotianae])

HSP 1 Score: 210.7 bits (535), Expect = 8.300e-51
Identity = 116/309 (37.54%), Postives = 172/309 (55.66%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVD-DVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTC--------GSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVG---------------------------DLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM---MAG---------QDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI 395
            ESGHAREY+ +ECL P    K W+   V +  K  ++MY +  + +F+LSAK++G +FYISQYE+FPD+ D + P  +YCAVLR  ++ +FKL+  GCE CD+  + +TC         +     DRQLLA+I+H  +      ++MRC S+ +P I EDK+SR VWCPR+++     G                           D   +  +++ +KLP W   + SL+L+F+ GR+   SAKNF++ +    AG               V+QFGK  K ++ALDFR P++P+QAF I LS   WN+
Sbjct:   82 ESGHAREYLAEECLSPTQA-KAWTYSTVERTNKNQYKMYWN--NDQFLLSAKQIGGTFYISQYENFPDTEDAEEPTGHYCAVLRKATDNNFKLYSCGCEGCDQSFNTFTCSNTHEDATAAAVEGADRQLLADISHFTKAAGVVGSEMRCFSVIIPAIMEDKRSRVVWCPRVSRAVTSSGGTPRGTPRARLLTSPSPRNKRQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLEEESAGTLASPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 387          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: CCA22972.1 (cleavage induced conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 209.5 bits (532), Expect = 1.900e-50
Identity = 120/315 (38.10%), Postives = 173/315 (54.92%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPD--SVDDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRC-------DDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRM------------NQLRRQV---------------GDLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM--------------------MAGQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKW 393
            ESGHAREYI +ECL P  +   W+   V +  KT FRMY +    +F+LSAK++G SFYISQYE FP+  + D +P   YCAVLR  SE +FKL+  GCE CD   + ++C + +          DRQLLA+I H  +   EA ++MRC S+ +P I EDK+SR +WCPR+            N L R++                DL     +R+ +KLP W   + SL+L+F+ GR+   S+KNF++ +                        D ++ ++QFGK  K +++LDFR+P++P+QAF I LS   W
Sbjct:   76 ESGHAREYIAEECLSPTQS-NTWTYTRVERKDKTEFRMYWNS--DQFLLSAKQIGGSFYISQYEHFPEAQAPDSIPTENYCAVLRQVSESNFKLYSCGCEGCDMSFNTFSCCNTNESAVLSHEGADRQLLADITHHTKLAGEAGSEMRCFSVVIPAIMEDKRSRVIWCPRLSRSVTPSRGTPRNVLARELVTSPSPHNKQNRFTFEDL-TGDRIRIESKLPVWCSQVNSLMLKFHGGRIREASSKNFMLMLDEDSKSKKDKLHKFSALERCEVDTDVQQVLMQFGKYSKSKFSLDFRYPLAPIQAFAIGLSSCAW 386          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: OWZ20901.1 (hypothetical protein PHMEG_0004629 [Phytophthora megakarya])

HSP 1 Score: 208.0 bits (528), Expect = 5.400e-50
Identity = 117/308 (37.99%), Postives = 170/308 (55.19%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVD-DVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTC--------GSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVG---------------------------DLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM---MAG--------QDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI 395
            ESGHAREY+ +ECL P    K W+   V +  K  ++MY +  + +F+LSAK+VG +FYISQYE+FP+S + + P  +YCAVLR  ++ +FKL+  GCE CD+    YTC               DRQLLA+I+H  +      ++MRC S+ +P I EDK+SR VWCPR+++     G                           D   +  +++ +KLP W   + SL+L+F+ GR+   SAKNF++ +    AG              V+QFGK  K ++ALDFR P++P+QAF I LS   WN+
Sbjct:   84 ESGHAREYLAEECLSPTQA-KSWTYSTVERSNKNQYKMYWN--NDQFLLSAKQVGGTFYISQYENFPESGEGEEPMGHYCAVLRKATDHNFKLYSCGCEGCDQSFSTYTCHNVSEDATAEAVEGADRQLLADISHFTKAAGVVGSEMRCFSVIIPAIMEDKRSRVVWCPRVSRSITSSGGTPRGITRTKLMTSPSPRNKFQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLDEEPAGTISPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 388          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: XP_009536624.1 (hypothetical protein PHYSODRAFT_565184 [Phytophthora sojae] >EGZ08452.1 hypothetical protein PHYSODRAFT_565184 [Phytophthora sojae])

HSP 1 Score: 207.6 bits (527), Expect = 7.000e-50
Identity = 117/309 (37.86%), Postives = 173/309 (55.99%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVD-DVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTC--------GSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMN----------------QLRRQVGDLDKAGH-----------VRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM----MAGQ--------DKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI 395
            E+GHAREY+ +ECL P  + K W+   V +  K  ++MY +  + +F+LSAK+VG +FYISQYE+FP+S + D P  +YCAVLR  ++ +FKL+  GCE CD+    YTC         +     DRQLLA+I+H  +      ++MRC S+ +P I +DK+SR VWCPR++                QL       +K  H           +++ +KLP W   + SL+L+F+ GR+   SAKNF++ +    +  Q             V+QFGK  K ++ALDFR P++P+QAF I LS   WN+
Sbjct:   84 ENGHAREYLAEECLSPTQS-KSWTYSTVERTNKNQYKMYWN--NDQFLLSAKQVGGTFYISQYENFPESGEADEPTGHYCAVLRKATDHNFKLYSCGCEGCDQSFSTYTCSNINEDAAATAVEGADRQLLADISHFTKAAGVVGSEMRCFSVVIPAIMDDKRSRVVWCPRVSRGVTTSGGTPRGTPSCQLMTSPSPRNKNQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLDEEPVGAQLSAVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 389          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: CCI41541.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 207.6 bits (527), Expect = 7.000e-50
Identity = 115/314 (36.62%), Postives = 170/314 (54.14%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPD--SVDDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYT-CGSGDRCD------DRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRM--------------------------NQLRRQVGDLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM--------------------MAGQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKW 393
            ESGHAREY+ +ECL P  +   W+   V +  KT FRMY +    +F+LSAK++G SFYISQYE FP+  + + +P   YCAVLR  S+ +FKL+  GCE CD   + ++ C + +  D      DRQLLA+I H  +   E  ++MRC S+ +P I EDK+SR +WCPR+                          N+  R   D      +R+ +KLP W   + SL+L+F+ GR+   S+KNF++ +                        D ++ ++QFGK  K +++LDFR+P++P+QAF I LS   W
Sbjct:   76 ESGHAREYLAEECLSPTQS-NNWTYTRVERKDKTEFRMYWNS--DQFLLSAKKIGGSFYISQYEHFPEAQASNTIPTENYCAVLRQVSDNNFKLYSCGCEGCDMSFNTFSCCNTNESADLSPEGADRQLLADITHHTKLAGEVGSEMRCFSVIIPAIMEDKRSRVIWCPRISRSVTPSQGTPRSALTRELLTSPSPRNKQNRFTFDDPTVDRIRIESKLPVWCSQVNSLMLKFHGGRIREASSKNFMLMLDEESIPKKDKVPKSRALDRCEVDTDAQQVLMQFGKYSKSKFSLDFRYPLAPIQAFAIGLSSCAW 386          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: XP_002997309.1 (cleavage induced conserved hypothetical protein [Phytophthora infestans T30-4] >EEY68923.1 cleavage induced conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 205.3 bits (521), Expect = 3.500e-49
Identity = 113/309 (36.57%), Postives = 172/309 (55.66%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVD-DVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTC--------GSGDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVG---------------------------DLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICM---MAG---------QDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI 395
            ESGHAREY+ +ECL P    K W+   V +  K  ++MY +  + +F+LSAK++G +FYISQYE+FP++ D + P  +YCAV+R  ++ +FKL+  GCE CD+  + +TC         +     DRQLLA+I+H  +      ++MRC S+ +P I +DK+SR VWCPR+++     G                           D   +  +++ +KLP W   + SL+L+F+ GR+   SAKNF++ +    AG               V+QFGK  K ++ALDFR P++P+QAF I LS   WN+
Sbjct:   83 ESGHAREYLAEECLSPTQA-KAWTYSTVERTNKNQYKMYWN--NDQFLLSAKQIGGTFYISQYENFPETEDAEEPTGHYCAVVRKATDHNFKLYSCGCEGCDQSFNTFTCSNIHEDATAAAVEGADRQLLADISHFTKAAGVVGSEMRCFSVVIPAIMDDKRSRVVWCPRVSRSVTTSGGTPRGTPKARLLTSPSPRNKHQHIFTFDTPTSDRIKIGSKLPVWCPEVNSLMLKFHGGRIREASAKNFMLMLEEEPAGTLASPVPDPTGNNRVVMQFGKFSKSKFALDFRFPLAPIQAFAIGLSSCAWNV 388          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: XP_008879314.1 (hypothetical protein H310_13543 [Aphanomyces invadans] >ETV92017.1 hypothetical protein H310_13543 [Aphanomyces invadans])

HSP 1 Score: 204.5 bits (519), Expect = 6.000e-49
Identity = 115/305 (37.70%), Postives = 169/305 (55.41%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVDD------VPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGS-------------GDRCDDRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVGDLDK--------------------------AGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICMMAGQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWN 394
            ESG+AREYIT+E L P  + K W+   V +  KT ++M+ +  + +F+LSAK+    FYISQYE F +S  D      VP  +YCAVL+  ++  FKL+  GCE CD+   KYTC +                  DRQLLA+I+H  + V   +++MRCLS+ +P + ED +SR +WCPRM +     G   +                          +  V+L++KLP W   + SL+++F+ GR+   SAKNF++ M    DK   V QFGK  K +++LDFR+P++P+QAF I LS   W+
Sbjct:   78 ESGNAREYITEESLSP-TSAKAWTYSTVHRINKTQYKMFWN--NDQFLLSAKQHNGIFYISQYEHFGESSGDTSSSGAVPTSHYCAVLKRTTDNSFKLYNCGCEGCDQGFSKYTCSNDHENASNFGFTEDAGEGADRQLLADISHFTKVVSGISSEMRCLSVVIPAVMEDSRSRVIWCPRMCRSDTPSGGTPRTSVKTELVTSPSPHGKKTKFTFETPVSDRVKLVSKLPSWCSEVNSLIMKFHGGRIREASAKNFMLVMDDDDDK--AVFQFGKFSKSKFSLDFRYPLAPIQAFAIGLSSCSWS 377          
BLAST of NO07G01950 vs. NCBI_GenBank
Match: XP_009842764.1 (hypothetical protein H257_16129 [Aphanomyces astaci] >ETV67771.1 hypothetical protein H257_16129 [Aphanomyces astaci])

HSP 1 Score: 204.1 bits (518), Expect = 7.800e-49
Identity = 113/303 (37.29%), Postives = 169/303 (55.78%), Query Frame = 0
Query:  134 ESGHAREYITDECLLPCPTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSVDD----VPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRCD-------------DRQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVGDLDK--------------------------AGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICMMAGQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWN 394
            ESG+AREYIT++ L P  + K W+   V +  KT ++M+ +  + +F+LSAK+    FYISQYE F +S  D    VP  +YCAVL+  ++  FKL+  GCE CD+   KYTC +                  DRQLLA+I+H  + V   +++MRCLS+ +P + ED +SR +WCPRM +     G   +                          +  V+L++KLP W   + SL+++F+ GR+   SAKNF++ +    DK   V QFGK  K +++LDFR+P++P+QAF I LS   W+
Sbjct:   80 ESGNAREYITEDSLSP-TSAKSWTYSTVHRINKTQYKMFWN--NDQFLLSAKQHNGMFYISQYEHFGESSADSSSAVPTSHYCAVLKRTTDNSFKLYNCGCEGCDQGFSKYTCSNDHETSSNFGFTEEAGEGADRQLLADISHFTKVVSGISSEMRCLSVVIPAVMEDSRSRVIWCPRMCRSDTPSGGTPRTSAKTELVTSPSPHGKKTKFTFETPVSDRVKLVSKLPSWCSEVNSLIMKFHGGRIREASAKNFMLVLDDDDDK--AVFQFGKFSKSKFSLDFRYPLAPIQAFAIGLSSCSWS 377          
The following BLAST results are available for this feature:
BLAST of NO07G01950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27227.12.000e-12960.66tubby-like protein [Nannochloropsis gaditana][more]
EWM27228.11.500e-7953.95tubby-like protein [Nannochloropsis gaditana][more]
XP_008910583.18.300e-5137.54hypothetical protein PPTG_15284 [Phytophthora para... [more]
CCA22972.11.900e-5038.10cleavage induced conserved hypothetical protein [A... [more]
OWZ20901.15.400e-5037.99hypothetical protein PHMEG_0004629 [Phytophthora m... [more]
XP_009536624.17.000e-5037.86hypothetical protein PHYSODRAFT_565184 [Phytophtho... [more]
CCI41541.17.000e-5036.62unnamed protein product [Albugo candida][more]
XP_002997309.13.500e-4936.57cleavage induced conserved hypothetical protein [P... [more]
XP_008879314.16.000e-4937.70hypothetical protein H310_13543 [Aphanomyces invad... [more]
XP_009842764.17.800e-4937.29hypothetical protein H257_16129 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL095nonsL095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR135ngnoR135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000689NSK000689Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01950.2NO07G01950.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01950.1NO07G01950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580634gene_2516Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g35gene3355Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01950.2NO07G01950.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01950.1NO07G01950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01950 ID=NO07G01950|Name=NO07G01950|organism=Nannochloropsis oceanica|type=gene|length=1950bp
ACAGAGCAAGCGGGCCTCTTCTTGGCCTTGCTTTGGAGGAGGACCGAGGA
GGACGGGACGCACACTTGTGTAAACAGCCATCAGGAGCACTACAACCGGG
AATAGAAATACATAACATGGCAGACATGCACTCGACATCGGCAGCTGGTG
AGCTCGAAGAGCTGATGCAGGACACAGTCAAGTTTATCGGTGGTGTGGCA
GACAAGCTTTGGACTGCGGGGACCTCGGCCAAGGACATGCTGTTGGATGG
GGAGAAGAAGGGAGATGGCAACAAAAGCAAAGAAAGGAGTAGCCTAGGCT
TTTACGAATGCAATGGTGTCATGGAGACCAAGTCGTTTGAAGATCTGGAC
ATGCTGGTAAGGACCAAGGCCGGAGAATCTGCGCAACTGGCGTGGCACCA
GATTTTGGCTCCCAATGCTCGACAATTACATCCATTCCAACTCGACGATT
TCACCGACATCCCATTCTCCAATTTCTTCTGCCCCGTCTTCTTATCATCT
CTTCTGACTTCACAGGAAAGTGGACATGCGCGTGAATACATTACCGACGA
GTGTCTGCTGCCCTGTCCGACCCTGAAGCGGTGGTCGACCTGCAACGTCG
TCAAGGACGGCAAGACCGCCTTTCGCATGTACCTAGATGAAACTCATACC
CGCTTTATGCTAAGCGCCAAGCGAGTGGGTGACTCCTTTTACATTTCCCA
GTACGAATCCTTCCCCGATAGCGTGGATGACGTGCCCGACCTTTATTACT
GCGCGGTGCTACGGACCTGCTCGGAGGGGCACTTCAAGCTTTTTCTGAAC
GGCTGTGAAGCGTGCGATAGAAAGACAGACAAATACACGTGTGGCTCCGG
GGATCGATGCGATGACCGTCAGCTCTTGGCGGAGATCAATCATgtaagcg
ttcctgtctctcttggaggatggaactttatttgaatgtggaatgacgtc
gtacgtcagagaagtgaaacatgaggcaaacttcaaatgattgcgtccct
cattctctccttgaactagaaacgagtgtcacttttcccatggtataaca
ttgaggacctccactgtcgcatcctcaatttgactgaatacattctttca
tcacctctttacccttctcctacccgtccccatagTCCGTGCGAAGAGTC
AAGGAGGCTAACGCGGACATGCGCTGTCTCTCAATCAAATTGCCCAAGAT
TCACGAAGACAAACAGTCCAGGGAGGTTTGGTGgtaagtttcattcatac
ttacatacgggcgtacgtgtatgtgagacatccatgtctaatttctcctt
gatgacttttgatgtcataagaggggaaaggatgatgtatgggaagagga
aaatgttagagaggatctgtcaaccaatcatcttctcaaccttgcccctc
ttctttcttctccccccttaaatccaattcctaccacacagCCCCAGAAT
GAACCAATTGCGGAGGCAGGTAGGAGACCTCGACAAAGCCGGGCACGTCC
GCTTGATGAATAAGCTTCCCGAATGGAACGAAGCACTGCAAAGTCTAGTC
CTCCGATTCAATAAGGGAAGAGTACTAGCGCCTTCGGCCAAGAACTTCTT
GATATGTATGATGGCTGGGCAGGATAAGCGGGAGGGGGTGTTGCAGTTTG
GAAAGACTCGCAAAAGGCGGTATGCTTTGGACTTCCGTCATCCTATCAGT
CCTCTGCAGGCTTTTGGGATCTGTCTTTCATTATTTAAATGGAACATCTA
GGGTGGAGACTGTGTGTGTATGTGCGGTGCAGATCGTACGGTCTCACCGG
AAAGGTCAAGGTGAAGATCCACCTATGACTTTTTTTTAGGGCCGGCACGG
CTAGTGGCTTTCTCGATACATCCAGTAGACAAAATTTTAATGATTGAGGG
GAAGGAGTACAGGAAGTAGTAAAATGAATCGAATTGCTAACGAACAAAAT
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protein sequence of NO07G01950.2

>NO07G01950.2-protein ID=NO07G01950.2-protein|Name=NO07G01950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=395bp
MADMHSTSAAGELEELMQDTVKFIGGVADKLWTAGTSAKDMLLDGEKKGD
GNKSKERSSLGFYECNGVMETKSFEDLDMLVRTKAGESAQLAWHQILAPN
ARQLHPFQLDDFTDIPFSNFFCPVFLSSLLTSQESGHAREYITDECLLPC
PTLKRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFP
DSVDDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRCDD
RQLLAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRR
QVGDLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICMMA
GQDKREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI*
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protein sequence of NO07G01950.1

>NO07G01950.1-protein ID=NO07G01950.1-protein|Name=NO07G01950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MADMHSTSAAGELEELMQDTVKFIGGVADKLWTAGTSAKDMLLDGEKKGD
GNKSKERSSLGFYECNGVMETKSFEDLDMLESGHAREYITDECLLPCPTL
KRWSTCNVVKDGKTAFRMYLDETHTRFMLSAKRVGDSFYISQYESFPDSV
DDVPDLYYCAVLRTCSEGHFKLFLNGCEACDRKTDKYTCGSGDRCDDRQL
LAEINHSVRRVKEANADMRCLSIKLPKIHEDKQSREVWCPRMNQLRRQVG
DLDKAGHVRLMNKLPEWNEALQSLVLRFNKGRVLAPSAKNFLICMMAGQD
KREGVLQFGKTRKRRYALDFRHPISPLQAFGICLSLFKWNI*
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Synonyms
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