NO07G01570, NO07G01570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_002900810.1 (50S ribosomal protein L1 [Phytophthora infestans T30-4] >EEY59617.1 50S ribosomal protein L1 [Phytophthora infestans T30-4]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 140/221 (63.35%), Postives = 174/221 (78.73%), Query Frame = 0 Query: 78 MPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 +P D TA + K RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 44 IPPIDIQTA-LSKCKAQNLRKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPSSTSFM 263
BLAST of NO07G01570 vs. NCBI_GenBank
Match: KUG02057.1 (50S ribosomal protein L1 [Phytophthora nicotianae]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + K RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 60 IQTALSKCKAQNARKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 274
BLAST of NO07G01570 vs. NCBI_GenBank
Match: POM76376.1 (Ribosomal protein L1 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 171/215 (79.53%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + I K RKF ET+D+A+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 60 IQSAISKCKAQNPRKFDETIDVAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 274
BLAST of NO07G01570 vs. NCBI_GenBank
Match: POM76451.1 (Ribosomal protein L1 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 171/215 (79.53%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + I K RKF ET+D+A+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 60 IQSAISKCKAQNPRKFDETIDVAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 274
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_008867404.1 (ribosomal protein L1 [Aphanomyces invadans] >ETW04448.1 ribosomal protein L1 [Aphanomyces invadans]) HSP 1 Score: 275.4 bits (703), Expect = 2.100e-70 Identity = 136/215 (63.26%), Postives = 168/215 (78.14%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 L + K+G RKF ETVD+ ++LGVDPRKPNQSVR V LP+GTGK VRVAVFA+GD + A+AAGAAIVGAE+L+ IQ G L FDRC+ATP++M LV RVAR+LGPRGLMPNPK+GTVT+DV A+K+A GQV+F+A++ G+VH GVGKVSF ALLENIR MVA+ AKPEGAKGKY+K HL+STMG+ + ++ +DP S FM Sbjct: 48 LNVALVECKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVSLPHGTGKVVRVAVFAKGDKADEARAAGAAIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIKAAQGGQVEFRAEKKGIVHAGVGKVSFSDEALLENIRAFMVAVGEAKPEGAKGKYIKACHLSSTMGRGIRLDTRYLDPSSPHFM 262
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_024585215.1 (50s ribosomal protein l1 [Plasmopara halstedii] >CEG48846.1 50s ribosomal protein l1 [Plasmopara halstedii]) HSP 1 Score: 274.6 bits (701), Expect = 3.600e-70 Identity = 136/220 (61.82%), Postives = 172/220 (78.18%), Query Frame = 0 Query: 79 PIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 P LTA I+ K K R F ETVDLA+QLGVDPRKPNQSVRG+ LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ IQ G + FDRCIATP++MPLV R+AR+LGPRGLMPNPK+GTVT+++ A+ +A GQV F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K H+++TMG + +++ +DP + FM Sbjct: 54 PPTSILTA-IRKCKAQKARNFDETVDLAVQLGVDPRKPNQSVRGIVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQIQSGKMEFDRCIATPDIMPLVGRIARILGPRGLMPNPKLGTVTQEIGDAIVAARGGQVAFRAEKNGIIHAGVGKLSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHVSTTMGPSYSLDIKYLDPALTSFM 272
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_009842512.1 (ribosomal protein L1 [Aphanomyces astaci] >ETV67949.1 ribosomal protein L1 [Aphanomyces astaci]) HSP 1 Score: 270.8 bits (691), Expect = 5.200e-69 Identity = 137/221 (61.99%), Postives = 171/221 (77.38%), Query Frame = 0 Query: 78 MPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 +P+ AL A K+G RKF ETVD+ ++LGVDPRKPNQSVR V LP+GTGK VRVAVFA+GD + A+AAGA IVGAE+L+ IQ G L FDRC+ATP++M LV RVAR+LGPRGLMPNPK+GTVT+DV A+ +AM GQV+F+A++ G+VH GVGKVSF ALL+NIR MVA+ AKPEGAKGKY+K HL+STMG + ++ +DP S +FM Sbjct: 45 VPLNVALAA----CKQGAVRKFDETVDIVVELGVDPRKPNQSVRSVVTLPHGTGKVVRVAVFAKGDKADEARAAGATIVGAEDLLADIQAGKLDFDRCVATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAITAAMGGQVEFRAEKKGIVHAGVGKVSFSDDALLDNIRAFMVAVGEAKPEGAKGKYVKACHLSSTMGHGIRLDPRQLDPSSPQFM 261
BLAST of NO07G01570 vs. NCBI_GenBank
Match: OQR85056.1 (arginyl-tRNA synthetase [Thraustotheca clavata]) HSP 1 Score: 264.2 bits (674), Expect = 4.900e-67 Identity = 129/201 (64.18%), Postives = 161/201 (80.10%), Query Frame = 0 Query: 83 ALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAV 284 AL + K+ RKF ETVD+ ++LGVDPRKPNQSVRGV LPNGTGK +RVAVFA+G+ E AKAAGA +VGAE+LV +Q G L FDRCIATP++M LV RVAR+LGPRGLMPNPK+GTVT+D+ A+++A GQV+F+A++ G+VH GVGKVSF AL+ENIR MVA+ +AKPEGAKGKY+K +HL+STMG + Sbjct: 44 ALPEALTLCKDNAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTIRVAVFAKGEKAEEAKAAGATLVGAEDLVADVQAGKLEFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDITAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGI 244
BLAST of NO07G01570 vs. NCBI_GenBank
Match: CBN75281.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 260.8 bits (665), Expect = 5.400e-66 Identity = 133/221 (60.18%), Postives = 169/221 (76.47%), Query Frame = 0 Query: 79 PIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFMF 300 PI +AL V K+G + F ETV++A+ L VDPRK NQ+VRG LP G+GK VRVAVFA+GDD +AA AAGA IVG E+LV ++ G++ F+RC+ATPE+M +V R AR+LGPRGLMPN K+G+VT+DV AV++A GQ QF+A + G +H+GVGKVSF + L+EN+R MVA++N KPE KGKY+ VHL+STMGK VPVEVATVDP S RFMF Sbjct: 55 PIAEALDLV----KDGAKANFDETVEVAMVLNVDPRKANQTVRGTVQLPKGSGKTVRVAVFAKGDDADAATAAGADIVGTEDLVASVMKGNIDFERCVATPEMMSVVGRAARVLGPRGLMPNAKLGSVTRDVEAAVRAAKGGQAQFRAGKNGALHMGVGKVSFARSDLIENVRATMVAISNLKPEVIKGKYISQVHLSSTMGKGVPVEVATVDPSSPRFMF 271
BLAST of NO07G01570 vs. NCBI_GenBank
Match: WP_013652472.1 (50S ribosomal protein L1 [Polymorphum gilvum] >ADZ70154.1 50S ribosomal protein L1 [Polymorphum gilvum SL003B-26A1]) HSP 1 Score: 250.0 bits (637), Expect = 9.600e-63 Identity = 131/212 (61.79%), Postives = 161/212 (75.94%), Query Frame = 0 Query: 79 PIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATV 291 P+ +AL + + AK KF ETV++AI LGVDPR +Q VRGV ILPNGTGK VRVAVFARGD + AKAAGA IVGAEELV +Q G + FDRCIATP++MPLV R+ ++LGPRGLMPNPK+GTVT DVA+AV+ A G VQF+ ++ G+VH GVGKVSF AL+ENIR L+ A+ AKP G+KG YLK V L+STMG V V+ +T+ Sbjct: 22 PLSEALALIKERAKV----KFDETVEVAINLGVDPRHADQMVRGVCILPNGTGKTVRVAVFARGDKADEAKAAGADIVGAEELVNEVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPKVGTVTPDVASAVRDAKGGAVQFRVEKAGIVHAGVGKVSFSQDALVENIRALLDAVQKAKPSGSKGTYLKRVALSSTMGPGVKVDPSTI 229 The following BLAST results are available for this feature:
BLAST of NO07G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01570 ID=NO07G01570|Name=NO07G01570|organism=Nannochloropsis oceanica|type=gene|length=1241bpback to top protein sequence of NO07G01570.1 >NO07G01570.1-protein ID=NO07G01570.1-protein|Name=NO07G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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