NO07G01570, NO07G01570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_005855271.1 (large subunit ribosomal protein L1 [Nannochloropsis gaditana CCMP526] >EKU21096.1 large subunit ribosomal protein L1 [Nannochloropsis gaditana CCMP526] >EWM27182.1 50s ribosomal protein l1 [Nannochloropsis gaditana]) HSP 1 Score: 411.8 bits (1057), Expect = 1.900e-111 Identity = 226/305 (74.10%), Postives = 241/305 (79.02%), Query Frame = 0 Query: 1 MLARVLHYEGSSLATTVRGYVRHFTAEAARKRRPTSTTVGKAVA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFMFEA 302 ML R+ H E ++T + G +R FTAE RKRRP STTVGKAVA EA+PIRDAL AV+Q AKE K+R F ETVDLAIQLGVDPRKPNQSVRGVQ LPNGTGK+VRVAVFARGDD EAAKAAGAA+VGAE+LVKAIQDG+LAFDRC+ATPEVMPLVSRVAR+LGPRGLMPNPKMGTVTKDV AVKSAMAGQ QFKADRFGMVHVGVGKVSF+ ALLENIRVLMVAL NAKPEGAKGKY KGV LTSTMGKAVPVEVATVDPRSSRFM EA Sbjct: 1 MLRRIRHQE-YRVSTALLGSLRGFTAETVRKRRPPSTTVGKAVASLNSARASQRSSSPVTSSHSLLQSSPSAPSSSRVTEALPIRDALAAVLQYAKEEKRRNFTETVDLAIQLGVDPRKPNQSVRGVQTLPNGTGKSVRVAVFARGDDAEAAKAAGAAVVGAEDLVKAIQDGELAFDRCVATPEVMPLVSRVARVLGPRGLMPNPKMGTVTKDVGAAVKSAMAGQAQFKADRFGMVHVGVGKVSFEPEALLENIRVLMVALGNAKPEGAKGKYFKGVFLTSTMGKAVPVEVATVDPRSSRFMLEA 304
BLAST of NO07G01570 vs. NCBI_GenBank
Match: GAX96007.1 (biotin-protein ligase, putative [Pythium insidiosum]) HSP 1 Score: 287.3 bits (734), Expect = 5.400e-74 Identity = 142/211 (67.30%), Postives = 174/211 (82.46%), Query Frame = 0 Query: 86 AVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSR 297 + ++ KE +RKF ETVD+AIQLGVDPRKPNQSVRGV LPNGTGK VRVAVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT+DVA A+ +A AGQV+F+A++ G+VH G+GKVSF ALLENIR MVA+++AKPEGAKGKY+K HL+STMG + +++ +DP S++ Sbjct: 384 SAVELCKESSRRKFDETVDIAIQLGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFARGVKAEEAKAAGATIVGAEDLVELVQKGQLDFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQDVADAINAAKAGQVEFRAEKKGIVHAGIGKVSFSEEALLENIRAFMVAISDAKPEGAKGKYIKAAHLSSTMGAGIALDIKYLDPSSAQ 594
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_012206502.1 (50S ribosomal protein L1 [Saprolegnia parasitica CBS 223.65] >KDO22831.1 50S ribosomal protein L1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 282.0 bits (720), Expect = 2.300e-72 Identity = 143/223 (64.13%), Postives = 174/223 (78.03%), Query Frame = 0 Query: 76 EAMPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 E P D TA + N KE RKF ETVD+ ++LGVDPRKPNQSVRGV LPNGTGK VRVAVFA+G+ E AKAAGA IVGAE+L+ IQ G L FDRCIATP++M LV RVAR+LGPRGLMPNPK+GTVT+DV+ A+ +A GQV+F+A++ G+VH GVGKVSF AL+ENIR MVA+ +AKPEGAKGKY+K +HL+STMG + +E +DP S +FM Sbjct: 40 EKKPFLDLPTA-LANCKENAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFAKGEKAEEAKAAGATIVGAEDLLADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVSAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARLLDPSSPQFM 261
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_008619176.1 (50S ribosomal protein L1 [Saprolegnia diclina VS20] >EQC27357.1 50S ribosomal protein L1 [Saprolegnia diclina VS20]) HSP 1 Score: 281.2 bits (718), Expect = 3.900e-72 Identity = 143/223 (64.13%), Postives = 173/223 (77.58%), Query Frame = 0 Query: 76 EAMPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 E P D TA + N KE RKF ETVD+ ++LGVDPRKPNQSVRGV LPNGTGK VRVAVFA+G+ E AKAAGA IVGAE+L+ IQ G L FDRCIATP++M LV RVAR+LGPRGLMPNPK+GTVT+DV A+ +A GQV+F+A++ G+VH GVGKVSF AL+ENIR MVA+ +AKPEGAKGKY+K +HL+STMG + +E +DP S +FM Sbjct: 40 EKKPFLDLPTA-LANCKENAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFAKGEKAEEAKAAGATIVGAEDLLADIQAGKLDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAISAAKGGQVEFRAEKKGIVHAGVGKVSFSDDALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARFLDPSSPQFM 261
BLAST of NO07G01570 vs. NCBI_GenBank
Match: OQR83728.1 (50S ribosomal protein L1 [Achlya hypogyna]) HSP 1 Score: 281.2 bits (718), Expect = 3.900e-72 Identity = 141/223 (63.23%), Postives = 175/223 (78.48%), Query Frame = 0 Query: 76 EAMPIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 E P D TA+ Q KE RKF ETVD+ ++LGVDPRKPNQSVRGV LPNGTGK VRVAVFA+G+ E AKAAGA +VGA++L+ AIQ G++ FDRCIATP++M LV RVAR+LGPRGLMPNPK+GTVT+DV A+++A GQV+F+A++ G+VH GVGKVSF AL+ENIR MVA+ +AKPEGAKGKY+K +HL+STMG + +E +DP S FM Sbjct: 40 EKKPFLDLPTALAQ-CKENAVRKFDETVDIVVELGVDPRKPNQSVRGVVTLPNGTGKTVRVAVFAKGEKAEEAKAAGATVVGADDLLAAIQAGNIDFDRCIATPDMMALVGRVARVLGPRGLMPNPKLGTVTQDVTAAIQAAKGGQVEFRAEKKGIVHAGVGKVSFTNEALIENIRAFMVAIGDAKPEGAKGKYIKAMHLSSTMGPGIRLEARFLDPSSPHFM 261
BLAST of NO07G01570 vs. NCBI_GenBank
Match: OWZ12409.1 (Ribosomal protein L1 [Phytophthora megakarya]) HSP 1 Score: 280.4 bits (716), Expect = 6.600e-72 Identity = 136/215 (63.26%), Postives = 172/215 (80.00%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + + K +RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 57 IQSALSRCKSQNERKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 271
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_009521646.1 (hypothetical protein PHYSODRAFT_327273 [Phytophthora sojae] >EGZ26358.1 hypothetical protein PHYSODRAFT_327273 [Phytophthora sojae]) HSP 1 Score: 280.0 bits (715), Expect = 8.600e-72 Identity = 142/220 (64.55%), Postives = 172/220 (78.18%), Query Frame = 0 Query: 79 PIRDALTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 P D TAV K K R F ET+DLAIQLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT +V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 57 PAIDVQTAV-SKCKTQKARNFDETIDLAIQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTLEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYTLDIKYLDPASTSFM 275
BLAST of NO07G01570 vs. NCBI_GenBank
Match: ETI36346.1 (ribosomal protein L1 [Phytophthora parasitica P1569] >ETK76573.1 ribosomal protein L1 [Phytophthora parasitica] >ETL29986.1 ribosomal protein L1 [Phytophthora parasitica] >ETL83237.1 ribosomal protein L1 [Phytophthora parasitica] >ETM36457.1 ribosomal protein L1 [Phytophthora parasitica] >ETO65067.1 ribosomal protein L1 [Phytophthora parasitica P1976] >ETP06186.1 ribosomal protein L1 [Phytophthora parasitica CJ01A1] >ETP34286.1 ribosomal protein L1 [Phytophthora parasitica P10297] >KUF93628.1 Peptidyl-prolyl cis-trans isomerase [Phytophthora nicotianae]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + K RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 60 IQTALSKCKAQNARKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 274
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_008896019.1 (ribosomal protein L1 [Phytophthora parasitica INRA-310] >ETN18328.1 ribosomal protein L1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + K RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 60 IQTALSKCKAQNARKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKPVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 274
BLAST of NO07G01570 vs. NCBI_GenBank
Match: XP_008896020.1 (ribosomal protein L1 [Phytophthora parasitica INRA-310] >ETN18329.1 ribosomal protein L1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 278.5 bits (711), Expect = 2.500e-71 Identity = 136/215 (63.26%), Postives = 170/215 (79.07%), Query Frame = 0 Query: 84 LTAVIQNAKEGKQRKFAETVDLAIQLGVDPRKPNQSVRGVQILPNGTGKAVRVAVFARGDDVEAAKAAGAAIVGAEELVKAIQDGDLAFDRCIATPEVMPLVSRVARMLGPRGLMPNPKMGTVTKDVATAVKSAMAGQVQFKADRFGMVHVGVGKVSFDTAALLENIRVLMVALNNAKPEGAKGKYLKGVHLTSTMGKAVPVEVATVDPRSSRFM 299 + + K RKF ET+DLA+QLGVDPRKPNQSVRGV LPNGTGK VR+AVFARG E AKAAGA IVGAE+LV+ +Q G L FDRCIATP+VMPLV RVAR+LGPRGLMPNPK+GTVT++V A+ +A GQV+F+A++ G++H GVGK+SF ALLEN+R MVAL++AKPEGAKGKY+K HL+S+MG + +++ +DP S+ FM Sbjct: 275 IQTALSKCKAQNARKFDETIDLAVQLGVDPRKPNQSVRGVVSLPNGTGKQVRIAVFARGPKAEEAKAAGATIVGAEDLVEQVQSGKLEFDRCIATPDVMPLVGRVARILGPRGLMPNPKLGTVTQEVGDAIAAARGGQVEFRAEKKGIIHAGVGKMSFSEEALLENVRAFMVALSDAKPEGAKGKYIKAAHLSSSMGPSYNLDIKYLDPASTSFM 489 The following BLAST results are available for this feature:
BLAST of NO07G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01570 ID=NO07G01570|Name=NO07G01570|organism=Nannochloropsis oceanica|type=gene|length=1241bpback to top protein sequence of NO07G01570.1 >NO07G01570.1-protein ID=NO07G01570.1-protein|Name=NO07G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=306bpback to top Synonyms
Publications
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