NO07G01540, NO07G01540 (gene) Nannochloropsis oceanica

Overview
NameNO07G01540
Unique NameNO07G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1986
Alignment locationchr7:467492..469477 +

Link to JBrowse

Properties
Property NameValue
DescriptionLamin-b receptor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:467492..469477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001171Ergosterol_biosynth_ERG4_ERG24
Homology
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_009843003.1 (hypothetical protein H257_16325 [Aphanomyces astaci] >ETV67444.1 hypothetical protein H257_16325 [Aphanomyces astaci])

HSP 1 Score: 369.4 bits (947), Expect = 2.300e-98
Identity = 204/448 (45.54%), Postives = 256/448 (57.14%), Query Frame = 0
Query:  219 NELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRR-GVLLAEGGKSGNILYDFYIGRELNPR---SGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            ++L D  A   +  WF  QVLLER++PGE   GV LP  +  RL YK+NGH  FW+++ ++  G                                                           +G+A                  PL   YD +   A  A++ SF +++ +YV+SFRR  VL AE G S + +++F+IGRELN R   +G FD KYFCELRPGLIGW VLNLGML KQ +L       +S  +  V  FQ  YV DAL +E+ +LTTMDITTDGFG+MLAFGDL WVPFTYS+QARYLV R   +   V   +  L++LGY IFR AN+ KD FR DP   SV H+K++ T RGTKL++SGWWG ARKINYTGDW M LAWC   G   ++PY+YAIYF +LLVHRA RDD  C  KYGDDW  YK  V+ +F PGV
Sbjct:   81 SDLVDAKAIAVVFGWFGLQVLLERLVPGEFHNGVVLPTKD--RLVYKVNGHTCFWLSMAIVAIG---------------------------------------------------------HLQGVA------------------PLTYAYDHYLHLAVGAILLSFLISVFVYVVSFRRPDVLCAEQGTSPSAVFNFFIGRELNFRTQSTGTFDLKYFCELRPGLIGWAVLNLGMLAKQLELHGT----VSHSMACVVFFQLLYVWDALWHEKCVLTTMDITTDGFGYMLAFGDLTWVPFTYSLQARYLVDRDPQLSVPVIAAIVALNMLGYAIFRGANAQKDAFRTDPHGDSVKHLKWMPTKRGTKLLVSGWWGLARKINYTGDWCMGLAWCAYTGSASIMPYYYAIYFAILLVHRAVRDDTSCREKYGDDWTTYKTHVQAVFVPGV 447          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_005643255.1 (sterol reductase [Coccomyxa subellipsoidea C-169] >EIE18711.1 sterol reductase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 367.5 bits (942), Expect = 8.900e-98
Identity = 186/312 (59.62%), Postives = 221/312 (70.83%), Query Frame = 0
Query:  357 LMGFGAFPLEQL-----YDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            ++G+  F  +QL     Y  F     AAV+FSF L+ CLYV SFR+G LLA+GG +GN LYDF+IGRELNPR G FD K FCEL PGLIGW+V++LGML KQ Q        IS PL+LVC FQG YVLDAL  E+AILTTMDITTDGFGFMLAFGDLAWVPFTYS+QARYLV  P ++  W    +  L  LGY IFR +NS K+ FR++P   SV  +K + TA G +L++SGWWG AR INY GDW+M+ AWC  CG  H++PYFY IYFG LLVHR  RD H CALKYG DW +Y   V++   P VY
Sbjct:  128 VVGYFGFYTQQLNLAWVYINFLPLLSAAVLFSFALSACLYVTSFRKGALLAKGGNTGNHLYDFFIGRELNPRIGSFDLKEFCELYPGLIGWLVVDLGMLQKQWQDLGY----ISTPLLLVCAFQGLYVLDALWLEKAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVDHPRTLSSWAVAGILALKALGYLIFRGSNSQKNAFRQNPEQPSVRRLKTITTASGRRLIVSGWWGIARHINYFGDWLMAWAWCLPCGFDHIVPYFYVIYFGALLVHRDLRDGHACALKYGKDWDRYCAIVKYRIVPLVY 435          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: CEM25112.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 365.9 bits (938), Expect = 2.600e-97
Identity = 214/498 (42.97%), Postives = 281/498 (56.43%), Query Frame = 0
Query:  169 LITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNE-LWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRG---VLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPG--SVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            L+  LP+ +    L  N S      +L   L  LP    ++ +    L+  E L   MA L +  W L  ++LERVLP  I  G+ LPG  G RL Y++NGHL FW  L+ +    P+                                             R   G      EG    +W +         G FPL  L+D +     +++     +++ L++ SFR G    LL+E G +G+ L DF++GRELNPR+ G DWK+FCELRPGLIGWVVL LG  +K  Q+++    G+S  LVL+ VFQG YV DAL  E A+L+TMDITTDGFGFML FGDL WVPFTYS+QAR ++ RP ++       +A L+L GYWIFR +NS KD FRRDP   SV H+KY+ET  G +L+ SGWWG ARKINYTGDW+M LAWC LCG    + Y+YA YF  LL+HRA RD+  C+ KYG DW++YK+ V ++  PGV
Sbjct:   55 LLVFLPSFVVLLYLSCNESFCVRTESLWEDLSHLPKAIGTQLVASGGLLSIERLTRSMAILLV--WMLVLMVLERVLPARIVDGMELPGGRG-RLTYRINGHLTFWAVLVALLIAYPQ---------------------------------------------RTYKG------EG----QWSL---------GPFPLSALHDLYLPLIVSSIALCLLMSVVLFLASFRSGSPPPLLSEPGNTGHPLTDFFMGRELNPRTYGLDWKFFCELRPGLIGWVVLLLGAALK--QMEEFGLGGVSPELVLLIVFQGLYVWDALKQEPAVLSTMDITTDGFGFMLVFGDLCWVPFTYSLQARIILIRPPNLPHAALAAIAALNLFGYWIFRSSNSQKDAFRRDPNAPSVRHLKYIETKTGRRLLTSGWWGRARKINYTGDWLMGLAWCLLCGGWTPIAYYYAGYFLFLLLHRALRDEWACSAKYGADWQRYKQHVPYVLIPGV 483          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_008868439.1 (hypothetical protein H310_05485 [Aphanomyces invadans] >ETW03055.1 hypothetical protein H310_05485 [Aphanomyces invadans])

HSP 1 Score: 361.7 bits (927), Expect = 4.900e-96
Identity = 232/580 (40.00%), Postives = 293/580 (50.52%), Query Frame = 0
Query:   87 GKAATKPPSANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRR-GVLLAEGGKSGNILYDFYIGRELNPR---SGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPG--SVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            G +A    S  P    F Y+FGGP G+  I+  LPVVV+ L+  C           +A+     +     L    WT L+    TTL                                             ++L D  A   +  WF+FQV+LERV+PGE   GV LP     RL YK+NGH  FW++L                                                 ++ GG     AL                           L   YD + Q A  A++ S  +++ +YV+SFRR  VL AE G S + +++F+IGRELN R   +G FD KYFCELRPGLIGW VLNLGML+KQ  L       +S  +  V  FQ  YV DAL +E+ +LTTMDITTDGFG+MLAFGDL WVPFTYS+QARYLV R  ++   V   +  +++LGY IFR AN+ KD FR DP   SV H+K++ T RGTKL+ISGWWG ARKINYTGDW+M LAWC   G   ++PY+YAIYF +LL HRA RDD  C  KYGDDW  Y K V+ +F PGV
Sbjct:   17 GNSAPHSHSKAPTDKPFPYDFGGPVGSFFIMCILPVVVVFLFAGC-----------NATYCLDNRYDVGEL----WTQLS----TTLS-------------------------------------------WDDLVDTNAIAVVFGWFVFQVMLERVVPGEFHHGVVLP--TKNRLVYKVNGHRCFWLSL------------------------------------------------AIVAGGHYQRVAL---------------------------LTFAYDHYLQLAVGAILLSLLISVFVYVVSFRRPDVLCAEQGMSPSPVFNFFIGRELNFRTRYTGTFDLKYFCELRPGLIGWAVLNLGMLVKQYDLH----GSVSLSMACVVFFQILYVWDALWHEKCVLTTMDITTDGFGYMLAFGDLTWVPFTYSLQARYLVDRDPNLSMPVVVAIVVVNVLGYVIFRGANAQKDAFRTDPNGDSVQHLKWMPTKRGTKLLISGWWGMARKINYTGDWLMGLAWCAYTGTASIMPYYYAIYFAILLGHRALRDDASCREKYGDDWNAYTKHVKAVFIPGV 453          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_019862998.1 (PREDICTED: lamin-B receptor-like, partial [Amphimedon queenslandica])

HSP 1 Score: 359.0 bits (920), Expect = 3.200e-95
Identity = 175/296 (59.12%), Postives = 205/296 (69.26%), Query Frame = 0
Query:  368 LYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            +Y  +  F  +AV+ SF L++ LY  SFR   LLA GG SGN  YDF+IGRELNPR G FDWK+FCELRPGLIGW ++N  ML  Q +   V    +S  ++LVCVFQ WYV DALL E AILTTMDI  DGFGFMLAFGDLAWVPFTYS+QARYLV  P  +  W    +  L L GY+IFR +NS KD FRRDP   SV + K L T RGT+L++SGWWG  R  NY GD MM+L+WC  CG  HVLPYFY IYF VLL+HR  RD+  C  KYGDDW +Y   V+W   PG+Y
Sbjct:  119 IYHHYLSFVTSAVLLSFILSIYLYARSFRSSALLALGGNSGNFFYDFFIGRELNPRIGAFDWKFFCELRPGLIGWTLINYCMLAAQWEKHGV----VSNSMILVCVFQAWYVFDALLFEEAILTTMDIAHDGFGFMLAFGDLAWVPFTYSLQARYLVDHPNHLSWWALAGIVALKLCGYYIFRSSNSQKDQFRRDPFHPSVKNFKTLPTKRGTRLLLSGWWGICRHPNYVGDLMMALSWCLPCGFNHVLPYFYFIYFAVLLIHRQLRDEDNCRGKYGDDWTRYCNIVKWRLLPGIY 410          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: OQR91734.1 (ATP-dependent RNA helicase dbp4 [Thraustotheca clavata])

HSP 1 Score: 357.8 bits (917), Expect = 7.100e-95
Identity = 201/441 (45.58%), Postives = 245/441 (55.56%), Query Frame = 0
Query:  226 AFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRG-VLLAEGGKSGNILYDFYIGRELNPRSG---GFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPG--SVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            A  A+  WF FQV LER +PG    GV LP  E  RL YK+NGH  FW++++V                                     G V TQ                                           L  +YD + Q A  A++ S  +++ +Y+ SFR   VL AE G S +  ++F+IGRELNPR+     FD KYFCELRPGLIGW +LN+G+L+KQ +L       +S  ++ V  FQ  YV DAL  E+ +LTTMDITTDGFGFMLAFGDL WVPFTY++QARYLV R   +       +  L+ LGY IFR AN+ KD FR DP   SV H+K+L T RGTKL+ISGWWG ARKINYTGDW M LAWC  CG   ++ YFYAIYF +LL+HRA RDDH C  KYGDDW  YKK V   F P V
Sbjct:  770 AIFAVFGWFAFQVALERFVPGSYHEGVLLPTKE--RLTYKVNGHTCFWLSMIV------------------------------------AGIVHTQIGS----------------------------------------LSFVYDHYVQLAVGAMLLSTFISVFVYLYSFRSADVLCAEQGSSPSATFNFFIGRELNPRNSLTKTFDLKYFCELRPGLIGWALLNIGLLLKQYELH----GSVSVSMISVVFFQNLYVWDALYYEKCVLTTMDITTDGFGFMLAFGDLTWVPFTYTLQARYLVDRDPHLSTAAVTAIILLNALGYCIFRGANAQKDAFRTDPNGESVKHLKFLPTKRGTKLLISGWWGMARKINYTGDWCMGLAWCAYCGFDSIMVYFYAIYFAILLLHRAMRDDHACREKYGDDWTTYKKHVPATFIPYV 1128          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_012193907.1 (hypothetical protein SPRG_00418, partial [Saprolegnia parasitica CBS 223.65] >KDO35576.1 hypothetical protein SPRG_00418, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 357.5 bits (916), Expect = 9.200e-95
Identity = 229/578 (39.62%), Postives = 286/578 (49.48%), Query Frame = 0
Query:   89 AATKPPSANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFR-RGVLLAEGGKSGNILYDFYIGRELNPRSG---GFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            AA    S  PA   F YEFGGP GA+ I++ LP VV+ L   C       + S    + F F                                           A L    T P            +V +E  +  A   +  WF FQVLLER++PG    GV LP     RL YK+NGH+ FW+++                                             AA  V                                     PL  +YD + Q A  +++ S  +++ +Y+ SFR   VL AE G S + +++F+IGRELNPRS     FD KYFCELRPGLIGW VLNLG+L KQ +L    GE ++  +  V  FQ  YV DAL +E+ +LTTMDITTDGFG+MLAFGD+ WVPFTY++QARYLV R   +       +  L++LGY IFR AN+ KD FR DP   +V H+K+L T RGTKL+ISGWWG ARKINYTGDW M LAWC  CG   +L YFYAIYF +LLVHRA RDD  C  KYGDDW  YK  V+ +F P V
Sbjct:   11 AAAPAASPEPAKKAFSYEFGGPLGAVFIMLILPAVVVFLVRGC-------NASYCVDNRFDF-------------------------------------------AELYAQVTAP------------IVASEFVNANAIAVVFGWFGFQVLLERLVPGAYHDGVLLP--TKTRLTYKVNGHVCFWLSM------------------------------------------AAAAALHVY----------------------------------VTPLSYVYDHYLQLAVGSMLLSGAISIFVYLFSFRANDVLCAEQGSSPSHVFNFFIGRELNPRSALTQTFDLKYFCELRPGLIGWAVLNLGLLAKQYELH---GE-VTLSMASVVFFQNLYVWDALFHEKCVLTTMDITTDGFGYMLAFGDMMWVPFTYTLQARYLVDRDPHLSAASLAAIIALNILGYAIFRGANAQKDAFRTDPNGANVAHLKFLATKRGTKLLISGWWGMARKINYTGDWCMGLAWCAYCGSGTLLVYFYAIYFAILLVHRAFRDDAACHEKYGDDWTTYKAHVKAIFIPRV 444          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_008607329.1 (hypothetical protein SDRG_03472 [Saprolegnia diclina VS20] >EQC39268.1 hypothetical protein SDRG_03472 [Saprolegnia diclina VS20])

HSP 1 Score: 357.1 bits (915), Expect = 1.200e-94
Identity = 227/578 (39.27%), Postives = 288/578 (49.83%), Query Frame = 0
Query:   89 AATKPPSANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFR-RGVLLAEGGKSGNILYDFYIGRELNPRSG---GFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPG--SVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            AA    S  PA   F YEFGGP GA+ I++ LP VV+ L   C       + S    + F F                  L T + A                                        +V ++  +  A   +  WF FQVLLER++PG    GV LP     RL YK+NGH+ FW++                                           M  AA                                  +     PL  +YD + Q A  +++ S  +++ +Y+ SFR   VL AE G S + +++F+IGRELNPRS     FD KYFCELRPGLIGW VLNLG+L KQ +L    GE ++  +  V  FQ  YV DAL +E+ +LTTMDITTDGFG+MLAFGD+ WVP+TY++QARYLV R   +       +  L++LGY IFR AN+ KD FR +P   SV H+K+L T RGTKL+ISGWWG ARKINYTGDW M LAWC  CG   +L YFYAIYF +LLVHRA RDD  C  KYGDDW +YK  V+ +F PGV
Sbjct:   11 AAAPAASPGPAKKAFIYEFGGPLGAVFIMLILPAVVVFLVRGC-------NASYCVDNRFDFAE----------------LYTQVTAP---------------------------------------IVASDFVNTNAIAVVFGWFGFQVLLERLVPGSYHDGVLLP--TKNRLTYKVNGHVCFWLS-------------------------------------------MAAAA---------------------------------ALHIYVTPLSYVYDHYLQLAVGSMLLSGAISVFVYLFSFRAHDVLCAEQGSSPSHVFNFFIGRELNPRSALTQTFDLKYFCELRPGLIGWAVLNLGLLAKQLELH---GE-VTLSMASVVFFQNLYVWDALFHEKCVLTTMDITTDGFGYMLAFGDMMWVPYTYTLQARYLVDRDPHLSAVSLAVIIALNILGYAIFRGANAQKDAFRTNPNGPSVAHLKFLSTKRGTKLLISGWWGMARKINYTGDWCMGLAWCAYCGHSTLLVYFYAIYFAILLVHRAFRDDAACHEKYGDDWTKYKAHVKAIFIPGV 444          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: OQR98794.1 (hypothetical protein ACHHYP_07835 [Achlya hypogyna])

HSP 1 Score: 355.5 bits (911), Expect = 3.500e-94
Identity = 227/586 (38.74%), Postives = 286/586 (48.81%), Query Frame = 0
Query:   85 MPGKAATKPPSANPASP----LFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRR-GVLLAEGGKSGNILYDFYIGRELNPRSG---GFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            M  + +T  P A  ASP     F YEFGGP GA+ I+  LP+VV+ L+  C                     ++      R+     +   T P  L                                         + L D  + L +  WF FQV LER++PG    GV L   E  RL YK+NGH  FWIT+L                                                                       + +  +   + F        YD +   A  A++ S   ++ +Y+ SFRR  VL AE G S + +++FY+GRELNPRS     FD KYFCELRPGLIGW VLNLGML KQ +L       ++  ++ V  FQ  YV DA  +E+ +LTTMDITTDGFGFMLAFGD+ WVPFTY++QARYLV R   +       +  L++LGY IFR AN+ KD FR DP   SV H+K+L TARGTKL+ISGWWG ARKINYTGDW M LAWC  CG   ++ YFYAIYF +LLVHRA RDD  C  KYG DW +YK  V+ +F PGV
Sbjct:    1 MHQRKSTPTPVATAASPEPKKAFAYEFGGPLGAVFIMTVLPLVVIFLFRAC---------------------NADYCVDNRFDLAELYAQVTAPMAL-----------------------------------------STLLDTRSILVVFGWFGFQVALERLVPGSYHAGVLLSTKE--RLQYKVNGHACFWITMLA---------------------------------------------------------------------AYVVHTYVTSLSFA-------YDHYLHLAVGAMLLSGATSIFVYLYSFRRPDVLCAEQGSSPSHVFNFYMGRELNPRSAWTQTFDLKYFCELRPGLIGWAVLNLGMLAKQYELH----GSVTVSMLSVVFFQNLYVWDAQFHEKCVLTTMDITTDGFGFMLAFGDMTWVPFTYTLQARYLVDRDPHLSTASLVAIMLLNVLGYAIFRGANAQKDAFRTDPTGPSVAHLKFLPTARGTKLLISGWWGMARKINYTGDWFMGLAWCAYCGGATIIVYFYAIYFAILLVHRAFRDDAACHEKYGADWLKYKAHVKAIFIPGV 442          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: KOO35635.1 (hypothetical protein Ctob_012037 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 355.1 bits (910), Expect = 4.600e-94
Identity = 225/586 (38.40%), Postives = 294/586 (50.17%), Query Frame = 0
Query:   77 KPKQIKVKMPGKAATKPPSANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGS--VPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            +P   + ++ G   +  P+A+      EYEFGGP GA+ I++ LP+VV  LY+ C                      +      +W+D  Y L   L A L G      +SP+                               LW   AFLA+  W     +L RVLPG    GV L   +G  L Y +N HLAFW+ + V                                       V+  AA                   G+  +E   P+           L  +YD + +   AA+ +SF +A   Y  SFRRG LLA GG++GN +YDF+IGR LNPR G  D K  CELRPGLIGW++LNLGM  KQ +        +S  ++ V + Q +YV DAL NE+AILTTMD+TTDGFGFMLAFGDLAW        AR LV     +  W    +  L++LG  IFR ANS KD FRR+P +  V H+++L T RGT+L+ SGWWG ARKINYTGDW+M L+WC  CG    + YFYAIYF VLL+HRA RDDH C++KYG DW+ YK++V  +F PG+
Sbjct:   80 EPSVYETELKGWQTSTAPAAHS-----EYEFGGPLGAVAIIIFLPLVVYMLYFGC----------------------TKADCVTKWSD-AYELPLKLYAGLTG-----PNSPS-------------------------------LWSWKAFLAVFLWIKLHFILYRVLPGATVPGVKL--ADGSHLNYYINAHLAFWLCVAVF--------------------------------------VVLPAA-------------------GLYYKE---PS--------TITLSLVYDHYLELTSAAIAYSFAMAAYCYAASFRRGELLAAGGQTGNAVYDFFIGRALNPRIGMLDLKVACELRPGLIGWMLLNLGMAFKQYERDGT----VSGSMIAVNLGQAYYVWDALANEQAILTTMDVTTDGFGFMLAFGDLAW--------ARILVDHDPQLPWWALVLVLALNVLGLCIFRGANSEKDAFRRNPNAPEVAHLQFLPTKRGTRLLTSGWWGMARKINYTGDWLMGLSWCLTCGGASPVAYFYAIYFAVLLIHRAVRDDHFCSVKYGADWETYKQKVPAVFVPGI 519          
The following BLAST results are available for this feature:
BLAST of NO07G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009843003.12.300e-9845.54hypothetical protein H257_16325 [Aphanomyces astac... [more]
XP_005643255.18.900e-9859.62sterol reductase [Coccomyxa subellipsoidea C-169] ... [more]
CEM25112.12.600e-9742.97unnamed protein product [Vitrella brassicaformis C... [more]
XP_008868439.14.900e-9640.00hypothetical protein H310_05485 [Aphanomyces invad... [more]
XP_019862998.13.200e-9559.12PREDICTED: lamin-B receptor-like, partial [Amphime... [more]
OQR91734.17.100e-9545.58ATP-dependent RNA helicase dbp4 [Thraustotheca cla... [more]
XP_012193907.19.200e-9539.62hypothetical protein SPRG_00418, partial [Saproleg... [more]
XP_008607329.11.200e-9439.27hypothetical protein SDRG_03472 [Saprolegnia dicli... [more]
OQR98794.13.500e-9438.74hypothetical protein ACHHYP_07835 [Achlya hypogyna... [more]
KOO35635.14.600e-9438.40hypothetical protein Ctob_012037 [Chrysochromulina... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000718NSK000718Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01540.1NO07G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580503gene_2476Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g9gene3330Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01540.1NO07G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01540 ID=NO07G01540|Name=NO07G01540|organism=Nannochloropsis oceanica|type=gene|length=1986bp
ATGGTAAGCACACGGGCACGGCGGTCCCCCGGTGACAAAAAAGCGGCTTC
CGCCGTTGCCGCTGCCACGCTGAAAGCCCCTAAGAGGCGCGCAACCATGG
CGTCCACCGCGTCCGCTGCTCCCACCACTCCTGGTCCCGTCTCCCGCTCC
GCCAGCCCCTCCGGGAATAAGGCGCCAAAGTCTCGCGTCGACCCCCCTCC
TCCCCAACAAGAAGTGGACGCAGCACCCAAGCCTAAGCAGATCAAGGTGA
AGATGCCCGGTAAGGCAGCCACGAAACCTCCTTCTGCCAATCCCGCGTCG
CCTTTGTTCGAGTACGAGTTTGGTGGGCCCTGGGGTGCCCTTTGCATCGT
CGTCGGCCTCCCAGTTGTAGTGCTAGGCCTTTACTACTGCTGCCCAAACT
ACGTTTCCTCTTTCTCCCCTTCCTCCTCCGCTTCCTCCCCCTTCTCCTTT
CAGTCCTCCTCCTCCCCTCTCGCCTGCCTGCGATGGACGGACCTGACCTA
CTTTCTCATCACCACTCTCCCAGCCACCCTCAAAGGCTACGCCTTGGAAA
TCAATTCCTCCCCCACGGAAGCCGCCCATGCCCTTCTCTGCTATTTGAAA
ACCCTTCCTTCCTTTGCACAAAGCAAGGGAATAGAGATGATTAACTTGGT
GAAAAATGAGCTCTGGGACCCGATGGCTTTTCTGGCGATTGTCGCTTGGT
TTCTCTTCCAGGTGTTGCTTGAGCGGGTGCTGCCGGGAGAAATCGCGTTG
GGCGTGCCGCTGCCTGGCACAGAAGGAAAGAGGCTGCCTTATAAATTGAA
TGGACATTTGGCGTTTTGGATTACTTTGCTAGTGATGGGGCATGGATGTC
CGAAATTTGCATCTCCTGTGTTGGAAGAAGTAGGTATCAAGCCGTCGGTA
GCGATGGACGAGGGGGATGAAGTGCAGCAGGTCTTGGGAGAGGTGGGGGA
GGTGATGACACAGGCGGCAGAAGAGGTGATCAGAGGAGGACGAGTGCTTG
GGGGGGCATTGATGCAGGCGACAGAAGGGATTGCAGCGAGGGAATGGCAA
ATCCCGGCTTGGGAAGATTTGATGGGGTTTGGAGCGTTTCCGCTTGAACA
GTTGTATGATCGCTTCCCGCAGTTTGCGTTTGCTGCTGTTGTCTTTTCGT
TTGGCCTGGCGTTGTGTCTATATGTGCTTAGTTTCCGGAGGGGTGTGTTG
TTGGCCGAGGGGGGGAAGAGTGGGAACATCCTATACGATTTTTACATAGG
GAGGGAACTGAACCCGAGGAGTGGGGGATTTGATTGGAAATACTTTTGTG
AGCTTCGGCCTGGGCTGATTGGATGGGTGGTGCTCAATTTGGGGATGTTG
ATGAAGCAGCAGCAGCTGCAGCAGGTCACGGGGGAGGGTATAAGTTGGCC
GCTGGTGCTTGTTTGTGTGTTTCAGGGGTGGTATGTTCTGGATGCCCTCT
TGAACGAACGGGCTATTCTGACGACAATGGATATCACGACGGATGGATTT
GGATTCATGCTTGCGTTTGGGGATTTGGCCTGGGTGCCATTTACGTACTC
AATGCAAGCGAGATATTTGGTGGGGAGGCCTGTGAGCGTTGGCGGATGGG
TTGCAGGGTGTCTGGCGGGGCTGCATTTGTTGGGGTATTGGATTTTTAGG
CGGGCGAATAGTATAAAGGATGTGTTTAGGAGAGACCCCGGAAGTGTTCC
GCACGTGAAGTATTTGGAAACGGCGCGAGGGACGAAGTTGATGATCAGTG
GGTGGTGGGGCTGGGCGCGTAAGATTAATTACACGGGGGATTGGATGATG
AGTTTGGCGTGGTGTGGGTTGTGTGGGCCGGTGCACGTGTTGCCATACTT
TTATGCGATCTATTTTGGGGTCTTGCTAGTGCACCGGGCGGCGAGAGACG
ATCATTTGTGTGCGTTGAAGTATGGGGACGATTGGAAGCAGTATAAAAAG
GAGGTAAGGTGGTTATTTTTTCCGGGGGTGTACTAA
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protein sequence of NO07G01540.1

>NO07G01540.1-protein ID=NO07G01540.1-protein|Name=NO07G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MVSTRARRSPGDKKAASAVAAATLKAPKRRATMASTASAAPTTPGPVSRS
ASPSGNKAPKSRVDPPPPQQEVDAAPKPKQIKVKMPGKAATKPPSANPAS
PLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSF
QSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLK
TLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIAL
GVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSV
AMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQ
IPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVL
LAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGML
MKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGF
GFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFR
RANSIKDVFRRDPGSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMM
SLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKK
EVRWLFFPGVY*
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Synonyms
Publications