NO07G01540, NO07G01540 (gene) Nannochloropsis oceanica

Overview
NameNO07G01540
Unique NameNO07G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1986
Alignment locationchr7:467492..469477 +

Link to JBrowse

Properties
Property NameValue
DescriptionLamin-b receptor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:467492..469477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001171Ergosterol_biosynth_ERG4_ERG24
Homology
BLAST of NO07G01540 vs. NCBI_GenBank
Match: EWM27168.1 (lamin-b receptor [Nannochloropsis gaditana])

HSP 1 Score: 833.2 bits (2151), Expect = 5.700e-238
Identity = 427/675 (63.26%), Postives = 507/675 (75.11%), Query Frame = 0
Query:    1 MVSTRARRSPGDKKAASAVAAATLKAPKRRATMASTASAAPTTP-GPVSR-SASPSGNKAPKSRVDPPPXXXEVDAAPKPKQIKVKMPGKAATKPPSANPASPL---FEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASS-PFSFQSSSSPLACLRWTDLTYFLITTLPATLKG-------YALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDE-VQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            MVSTR RRSPG KK  +A  A  ++  +RR   A T+S     P  P S+   SP   KAPKSR    P   E +A  +PK  + K   KA +    ++P   +   F+YEFGGPWGAL IVVGLPVVV+GLYY CPN++SS SPSSS+S  P SF+SS+SPLACLRWTD+ +FL +TLPA L+        +AL+   SP   A A +  ++ +P   +++G  ++ LV+NELWDP+AF  IVAWF FQV+LER+LPGE+ALGVPL G EG RLPYKLNGHLAFWI+LL++ HGCP+FA PV E+ GI P++  DEGDE         G+ + Q A      G+   GA              IP   +L GFG FPLE+LYD FPQFAFAAVVFSFGL+L LY+ SFR+G  LA+GG+SGN++YDFY+GRELNPR G FDWKYFCELRPGLIGWV LN+GMLMKQQQLQ VTGE  SWPLVLV VFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYS+QARYLVGRPVS+  +    L+ +HL+GYWIFR+ANS KD FRRDP SVPHV+Y++T RGTKLM+SGWWGWARKINYTGDW+M+LAWCGLCGP HVLPYFYAIYFG+LLVHRAARDDHLC+LKYG DW++YKKEV+WLF PG+Y
Sbjct:    1 MVSTRRRRSPGSKK-ENAATAPEIRTVRRRTVAAVTSSGTDNIPLTPTSKILGSPPRKKAPKSRSIDSPLSEEDNAPTRPKATRKKPMSKALSASAPSHPPEAVASSFKYEFGGPWGALGIVVGLPVVVMGLYYFCPNFMSSASPSSSSSKYPLSFRSSTSPLACLRWTDMAHFLTSTLPALLRALPSTFSTFALQARRSPHNTASAFMAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPV-EDEGILPTIVGDEGDEQFVYTASAAGDAVLQHA------GQAANGA--------------IPVLGELTGFGPFPLEKLYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 653          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_005855274.1 (D14-sterol reductase [Nannochloropsis gaditana CCMP526] >EKU21099.1 D14-sterol reductase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 646.4 bits (1666), Expect = 9.900e-182
Identity = 304/466 (65.24%), Postives = 353/466 (75.75%), Query Frame = 0
Query:  196 LCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            +  ++ +P   +++G  ++ LV+NELWDP+AF  IVAWF FQV+LER+LPGE+ALGVPL G EG RLPYKLNGHLAFWI+LL++ HGCP+FA PV E+ GI P++                                                                   LYD FPQFAFAAVVFSFGL+L LY+ SFR+G  LA+GG+SGN++YDFY+GRELNPR G FDWKYFCELRPGLIGWV LN+GMLMKQQQLQ VTGE  SWPLVLV VFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYS+QARYLVGRPVS+  +    L+ +HL+GYWIFR+ANS KD FRRDP SVPHV+Y++T RGTKLM+SGWWGWARKINYTGDW+M+LAWCGLCGP HVLPYFYAIYFG+LLVHRAARDDHLC+LKYG DW++YKKEV+WLF PG+Y
Sbjct:    1 MAIIQHIPGALKARGSALVALVQNELWDPLAFACIVAWFCFQVVLERLLPGEVALGVPLLGAEGLRLPYKLNGHLAFWISLLLLVHGCPRFAVPV-EDEGILPTI-------------------------------------------------------------------LYDHFPQFAFAAVVFSFGLSLLLYLASFRKGARLADGGRSGNVMYDFYMGRELNPRLGSFDWKYFCELRPGLIGWVALNMGMLMKQQQLQAVTGEPPSWPLVLVNVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSLQARYLVGRPVSLSTYALAGLSAMHLVGYWIFRQANSTKDAFRRDPTSVPHVRYMDTIRGTKLMVSGWWGWARKINYTGDWLMALAWCGLCGPTHVLPYFYAIYFGILLVHRAARDDHLCSLKYGADWQKYKKEVKWLFLPGIY 398          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_002287183.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94626.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 434.1 bits (1115), Expect = 7.700e-118
Identity = 220/437 (50.34%), Postives = 279/437 (63.84%), Query Frame = 0
Query:  228 LAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQ-QQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGS--VPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            L I+ WF+FQV LER+LP E  +G PLPG  G RLPY++NGHLAFW+TLLV+    P++             V +++G                      +GG                          ++ FG  PL  LYD  P  AF  ++++  L+  L++ SF +G+LLA GG SGN  YDF++GRELNPR G FDWK FCELRPGLIGW++LNL M+ KQ ++L  VTG      ++L+  FQG YV DAL  ERAILTTMDITTDGFGFML FGDLAWVPFTYS+Q+RYLV     +       + G++++GY IFR ANS KD FRRDP S  V H+ +L+T RGTKL+ SGWWG ARKINYTGDW+M L+WC +CG   ++PY+YAIYF +LLVHR+ RDDH+C  KYGDDW +YK  V + F PGV+
Sbjct:   86 LVILLWFVFQVALERMLPCETVMGAPLPGGSGNRLPYRINGHLAFWVTLLVLDVAWPRW-------------VDVNDG----------------------KGGMA----------------------SSVLVFGRAPLTWLYDHHPTLAFVTILWTLLLSTYLHLKSFGKGLLLAAGGNSGNPFYDFFMGRELNPRWGTFDWKEFCELRPGLIGWMILNLAMMSKQYERLGYVTGS-----MILINSFQGLYVWDALYQERAILTTMDITTDGFGFMLIFGDLAWVPFTYSLQSRYLVDHDPHLSWTTLAAIVGVNIIGYLIFRGANSQKDAFRRDPNSAEVSHLTFLQTKRGTKLLTSGWWGMARKINYTGDWIMGLSWCMVCGFESIVPYYYAIYFAILLVHRSIRDDHMCQEKYGDDWGKYKSIVPYRFIPGVF 460          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: EJK57400.1 (hypothetical protein THAOC_22555 [Thalassiosira oceanica])

HSP 1 Score: 418.7 bits (1075), Expect = 3.400e-113
Identity = 243/565 (43.01%), Postives = 309/565 (54.69%), Query Frame = 0
Query:  101 PLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDL--TYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQ-QQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGS--VPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            P F+YEFGGP GA   V+ LPV+ L L Y                                W  +    F       T +   L + S   E+   +LC     PS    + +    LV            I+ WFLFQV LER LP ++  G PLP   G+RL Y++NGHLA W+TLL++    P +               +D G    Q                                            + ++ FG  P   LYD +   A A ++++F L+  LY+ SF +G+LLA GG SG+  YDF++GRELNPR G FDWK FCELRPGLIGW++LN+ ML KQ ++L   TG      ++LV +FQG YV DAL  E+AILTTMDITTDGFGFML FGDLAWVPFTYS+QARYLV     +       + G++  GY IFR AN  KD FRRDP S  V H+++++T RGTKL+ SGWWG ARKINYTGDW+M L+WC LCG   V+PYFYAIYF +LLVHR+ RDDH+C  KYG+DW++YK  V + FFPGV
Sbjct:    4 PAFKYEFGGPIGAAANVLLLPVLTLCLCY--------------------------------WASIGRVDFEQVLTDGTCQDNRLSLLSKFAES--EVLC-----PSCGNIERLITCALV------------IMCWFLFQVGLERFLPCQLVDGAPLPDHSGRRLTYRINGHLALWMTLLLLDVAWPHW---------------IDIGSNEDQ--------------------------------------------KTVLVFGRAPFTWLYDNYSTLALATIIWTFFLSTYLYLKSFGKGLLLAAGGNSGSTAYDFFLGRELNPRWGSFDWKEFCELRPGLIGWMLLNISMLAKQYERLGYATGS-----MILVNLFQGVYVWDALYQEKAILTTMDITTDGFGFMLCFGDLAWVPFTYSLQARYLVDHDPHLSPPALAAILGVNCAGYLIFRGANGQKDAFRRDPTSPEVSHLQFMQTKRGTKLLTSGWWGLARKINYTGDWIMGLSWCMLCGFESVVPYFYAIYFAILLVHRSIRDDHMCKEKYGEDWEKYKDLVPYRFFPGV 453          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_002182735.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46022.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 409.1 bits (1050), Expect = 2.700e-110
Identity = 244/579 (42.14%), Postives = 306/579 (52.85%), Query Frame = 0
Query:   89 AATKPPSANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSP---TEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFR-RGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQ-LQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            A   P   N A+  FEYEFGGP GA    + LP+VVL L +                                W+D+       L A+L       +  P       +++LC     P    S  + ++             L +VAWFLFQVLLER LP E+  G P+ G    RL Y++NGHLAFW+TLL++    P + +                                               AL Q                    F   PL  LY  + + AF  ++ S   +  LY+ SFR +  +LA+GG SGN+LYDF+IGRELNPR G FDWK FCELRPGLIGWV+LN+    +Q   L  VTG      ++LV VF G YV DAL  ERAILTTMDITTDGFGFML FGDLAWVPFTYS+QARYLV    ++       +  LH+LGY IFR AN  KD FRR+P   ++ H+ +L+T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG    +PYFYA+YF +LLVHR+ RDDH+C++KYGDDW+ YK  V   F PGV
Sbjct:    4 ATAVPRQQNRAAAAFEYEFGGPIGATLTTLALPLVVLVLAH--------------------------------WSDVGRVDFAFLSASLGDTTNSHDPKPFWQIIRQNSVLC-----PRCNDSDSVSLL---------LRCALGVVAWFLFQVLLERFLPCELVQGSPVKGDAKNRLTYRINGHLAFWVTLLLVHAAWPVWDA---------------------------------------------NAALYQ--------------------FTTAPLATLYKYYTELAFVTILLSAMASTGLYLDSFRGQHKILADGGDSGNVLYDFFIGRELNPRIGTFDWKEFCELRPGLIGWVLLNIACAKQQYSVLGYVTGS-----MILVNVFHGIYVWDALYQERAILTTMDITTDGFGFMLLFGDLAWVPFTYSLQARYLVKHDPNLSAVALAGIVALHILGYLIFRGANGQKDAFRRNPTDPALSHLTFLQTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFDSAVPYFYAVYFFILLVHRSIRDDHMCSVKYGDDWETYKSIVPHRFVPGV 466          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: CBJ27514.1 (C-14 sterol reductase C14 Sterol reductase [Ectocarpus siliculosus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.700e-107
Identity = 244/571 (42.73%), Postives = 299/571 (52.36%), Query Frame = 0
Query:   95 SANPASPLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAE--GGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            S+ P+S    YEFGGP GA  I V LP+VVLGL + C                         L  LR+  L             G ALE                  LP                +L+ P+AF  +  W LFQ+LL+RVLPG+   GV L   +G RLPYK++GH AFW TL+V   G                             L E+G V                                        G     L  LYD + + A A    SF L++ L+V S R+G  LA+  G    + +YDFYIGRELNPR G  D K FCELRPGL+GWVV+NLGML+KQ++LQ      +S  +++V VFQG YV D L  ER+ILTTMDITT+GFGFMLAFGDL W+PFTYS+QA YLV     +  W    ++ L L+GY IFR AN  KD FRRDP   +V H++++ T RGTKL+ SGWWG ARKINYTGDW+M LAWC   G    +PYFY IYFGVLLVHRA RDDH CA KYG DW  YK++V  LF PG++
Sbjct:   72 SSVPSSKEPHYEFGGPIGAGLITVSLPIVVLGLCFIC--------------------GKEYCLQGLRFDTL-------------GGALE-----------------QLPDSL------------GDLFSPVAFTIVSQWLLFQILLDRVLPGKTVEGVVL--QDGSRLPYKMSGHAAFWTTLVVTALG-----------------------------LSELGGV----------------------------------------GSTKLNLSALYDLYEELAVATATISFALSVGLFVASHRKGAKLADASGTVGRSAIYDFYIGRELNPRIGPLDLKCFCELRPGLLGWVVINLGMLLKQRELQGY----VSASMIMVNVFQGLYVWDGLFFERSILTTMDITTEGFGFMLAFGDLCWLPFTYSLQAHYLVTNDPGLPLWAVAVISCLCLVGYAIFRGANGQKDAFRRDPNASAVSHLQWMPTKRGTKLLTSGWWGAARKINYTGDWLMGLAWCMFAGFSSPVPYFYCIYFGVLLVHRAMRDDHACAAKYGPDWSVYKQKVPSLFVPGLF 505          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: XP_005838841.1 (ergosterol biosynthesis ERG4/ERG24 family [Guillardia theta CCMP2712] >EKX51861.1 ergosterol biosynthesis ERG4/ERG24 family [Guillardia theta CCMP2712])

HSP 1 Score: 388.3 bits (996), Expect = 4.900e-104
Identity = 229/560 (40.89%), Postives = 292/560 (52.14%), Query Frame = 0
Query:  104 EYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSFQSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLKTLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDPGS--VPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGVY 662
            EYEFGGP G    ++ LP+VV+ LY  CPN           SS F          CLR  D+  F +  +P                           +P  +Q             L+   AF     WFLF V LER+LP ++  GV L  + G+RL Y++NGHL FW++L V  H                                                                                   L  LYD++ + A AA+  S  L++ LY+ SF++G LLA+GG +G   YDF++GRELNPR G FD K FCELRPGLIGW++LNLGML KQ+QL       +S  ++LV  FQG YV DAL NE A+LTTMD+TTDGFG+ML FGDLAWVPFTYS+ ARYLV     +   +    A L +LG+++FR +NS KD FRRDP S  V H+KYL+T RGT L++SGWWG ARKINYTGDW   L+W    G   +L YFY IYF  LL HRA RDDH C+LKYG DWK++K+ V ++FFP ++
Sbjct:    6 EYEFGGPIGTTINMIVLPLVVVFLYLACPN---------GESSGF----------CLRGVDV--FQLKHMP---------------------------IPGLSQ-------------LFSLDAFAMCAGWFLFLVFLERILPYKVGQGVEL--SNGQRLKYRINGHLTFWVSLFVAEH--------------------------------------------------------------------------------FIDLSILYDKYLELAVAAISLSILLSVYLYLSSFKKGALLAKGGNTGCAPYDFWMGRELNPRVGDFDLKVFCELRPGLIGWMLLNLGMLQKQRQL---NNGSVSTSMLLVNAFQGLYVWDALYNEEAVLTTMDVTTDGFGYMLCFGDLAWVPFTYSLPARYLVTHNAGLSDEILLAFALLGMLGFYVFRASNSQKDAFRRDPQSEEVKHLKYLKTERGTSLIVSGWWGLARKINYTGDWFFGLSWSLFTGFGSILTYFYPIYFAALLAHRAWRDDHACSLKYGADWKKFKEMVPYVFFPWLF 419          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: GAX15788.1 (Delta14-sterol reductase [Fistulifera solaris])

HSP 1 Score: 387.9 bits (995), Expect = 6.400e-104
Identity = 202/442 (45.70%), Postives = 260/442 (58.82%), Query Frame = 0
Query:  228 LAIVAWFLFQVLLERVLPGEIALGVPLPG-------TEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            + +V WFLFQVLLER+LP ++  G PL G       +  + L Y++NGHLAFW+T LV+                                                               G   +  +   W+    F +FPL  LYD   + A    +  FGL+L LY+ SF     LA  G SGN++YDF++GRELNPR G FDWK FCELRPGL+GW++LNL    KQ+++Q      +S  ++L+  FQG YV DAL  E AILTTMDITTDGFG+MLAFGDLAWVPFTY++QARYLV     +       +  LH++GY  FR AN  KD+FRR+P   +V H+ YL+T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG   ++PYFYAIYF +LL+HR+ RDDH C  KYG DW +YK++V + F PG+
Sbjct:   59 VGLVTWFLFQVLLERMLPCKLVQGTPLQGVFVWKSISTKECLEYRINGHLAFWVTFLVL-------------------------------------------------------------QTGWIVKHEESGTWQ----FTSFPLSGLYDVTAELAVGTSILCFGLSLYLYLSSFIGNRRLAVPGTSGNVVYDFWMGRELNPRIGSFDWKEFCELRPGLMGWMILNLAYCQKQKEVQGY----VSMSMMLLQCFQGLYVWDALYQEEAILTTMDITTDGFGYMLAFGDLAWVPFTYTLQARYLVLHDPQLSVTALTAILALHIVGYVTFRGANGQKDIFRRNPEDPAVAHLTYLKTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFNSIVPYFYAIYFLILLIHRSIRDDHACQEKYGSDWDEYKRKVPYRFIPGL 431          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: GAX16286.1 (Delta14-sterol reductase [Fistulifera solaris])

HSP 1 Score: 386.3 bits (991), Expect = 1.900e-103
Identity = 203/443 (45.82%), Postives = 260/443 (58.69%), Query Frame = 0
Query:  228 LAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKR--------LPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            + +V WFLFQVLLER+LP ++  G PL G    R        L Y++NGHLAFW+T LV+                                                               G   +  +   W+    F +FPL  LYD   + A    +  FGL++ LY+ SF     LA  G SGN++YDF++GRELNPR G FDWK FCELRPGL+GW++LNL    KQ   ++V G  +S  ++L+  FQG+YV DAL  E AILTTMDITTDGFG+MLAFGDLAWVPFTY++QARYLV     +       +  LH++GY  FR AN  KD+FRR+P   +V H+ YL+T RGTKL+ SGWWG ARKINYTGDW+M L WC +CG   ++PYFYAIYF +LL+HR+ RDDH C  KYG DW +YK++V + F PG+
Sbjct:   59 VGLVTWFLFQVLLERLLPCKLVQGTPLQGVFAARKSISTQECLEYRINGHLAFWVTFLVL-------------------------------------------------------------QTGWIVKHEESGTWQ----FTSFPLSGLYDVTAELALGTSILCFGLSVYLYLTSFIGNKRLAVPGTSGNVVYDFWMGRELNPRIGNFDWKEFCELRPGLMGWMILNLAYCQKQ---KEVLGY-VSMSMMLLQCFQGFYVWDALYQEEAILTTMDITTDGFGYMLAFGDLAWVPFTYTLQARYLVLHDPQLSITALLAILVLHIVGYVTFRGANGQKDIFRRNPEDPAVAHLTYLKTKRGTKLLTSGWWGMARKINYTGDWIMGLTWCMVCGFNSIVPYFYAIYFLILLIHRSIRDDHACQEKYGSDWDEYKRKVPYRFIPGL 432          
BLAST of NO07G01540 vs. NCBI_GenBank
Match: GBG32972.1 (Delta14-sterol reductase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 384.4 bits (986), Expect = 7.000e-103
Identity = 208/444 (46.85%), Postives = 261/444 (58.78%), Query Frame = 0
Query:  219 NELWDPMAFLAIVAWFLFQVLLERVLPGEIALGVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSVAMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQIPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVLLAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGMLMKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGFGFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFRRANSIKDVFRRDP--GSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMMSLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKKEVRWLFFPGV 661
            +++W+  AF+ I+ WF F VLLERVL   +  G  L   +G RL Y+L+GHLAFW+T LV+ HG                ++ + E D  +                                                +    FPLE +YD + Q A  AV FS GL++ L+  SFR+G +LAEGG + + LY+F+IGRELNPR G FD K FCELRPGLIGW  +N G   KQ QL       IS  ++L+ +FQG YV D+L +ERAIL+TMDITTDGFGFMLAFGDLAWVPFTYS+QAR+LV     +       +  L    Y+ FR +NS KD FRRDP    V H+K + TARG KL+ISGWWG+ARKINYT D  M L+WC L G    + YFY IYF +LLVHRA RDDH C+ KYG DW++YK  V +LF PGV
Sbjct:   89 DQVWEGEAFIVILIWFSFHVLLERVLYCNVVEGTVL--RDGTRLKYRLSGHLAFWVTYLVLAHG----------------NLGVIENDPSK------------------------------------------------VNLHPFPLEYIYDHYLQLAMGAVTFSMGLSVYLFSKSFRKGAMLAEGGDTSSHLYNFFIGRELNPRIGSFDLKEFCELRPGLIGWATINAGCAFKQYQL----NGHISTAMLLINIFQGIYVWDSLYHERAILSTMDITTDGFGFMLAFGDLAWVPFTYSLQARFLVENDPGLSPLQLALITLLFAASYYAFRSSNSEKDAFRRDPNGSDVQHLKTMPTARGRKLLISGWWGFARKINYTADLCMGLSWCLLTGFHTPVTYFYFIYFFILLVHRAFRDDHSCSQKYGADWEKYKSHVPYLFIPGV 462          
The following BLAST results are available for this feature:
BLAST of NO07G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27168.15.700e-23863.26lamin-b receptor [Nannochloropsis gaditana][more]
XP_005855274.19.900e-18265.24D14-sterol reductase [Nannochloropsis gaditana CCM... [more]
XP_002287183.17.700e-11850.34predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK57400.13.400e-11343.01hypothetical protein THAOC_22555 [Thalassiosira oc... [more]
XP_002182735.12.700e-11042.14predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ27514.14.700e-10742.73C-14 sterol reductase C14 Sterol reductase [Ectoca... [more]
XP_005838841.14.900e-10440.89ergosterol biosynthesis ERG4/ERG24 family [Guillar... [more]
GAX15788.16.400e-10445.70Delta14-sterol reductase [Fistulifera solaris][more]
GAX16286.11.900e-10345.82Delta14-sterol reductase [Fistulifera solaris][more]
GBG32972.17.000e-10346.85Delta14-sterol reductase [Aurantiochytrium sp. FCC... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000718NSK000718Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01540.1NO07G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580503gene_2476Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g9gene3330Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01540.1NO07G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01540 ID=NO07G01540|Name=NO07G01540|organism=Nannochloropsis oceanica|type=gene|length=1986bp
ATGGTAAGCACACGGGCACGGCGGTCCCCCGGTGACAAAAAAGCGGCTTC
CGCCGTTGCCGCTGCCACGCTGAAAGCCCCTAAGAGGCGCGCAACCATGG
CGTCCACCGCGTCCGCTGCTCCCACCACTCCTGGTCCCGTCTCCCGCTCC
GCCAGCCCCTCCGGGAATAAGGCGCCAAAGTCTCGCGTCGACCCCCCTCC
TCCCCAACAAGAAGTGGACGCAGCACCCAAGCCTAAGCAGATCAAGGTGA
AGATGCCCGGTAAGGCAGCCACGAAACCTCCTTCTGCCAATCCCGCGTCG
CCTTTGTTCGAGTACGAGTTTGGTGGGCCCTGGGGTGCCCTTTGCATCGT
CGTCGGCCTCCCAGTTGTAGTGCTAGGCCTTTACTACTGCTGCCCAAACT
ACGTTTCCTCTTTCTCCCCTTCCTCCTCCGCTTCCTCCCCCTTCTCCTTT
CAGTCCTCCTCCTCCCCTCTCGCCTGCCTGCGATGGACGGACCTGACCTA
CTTTCTCATCACCACTCTCCCAGCCACCCTCAAAGGCTACGCCTTGGAAA
TCAATTCCTCCCCCACGGAAGCCGCCCATGCCCTTCTCTGCTATTTGAAA
ACCCTTCCTTCCTTTGCACAAAGCAAGGGAATAGAGATGATTAACTTGGT
GAAAAATGAGCTCTGGGACCCGATGGCTTTTCTGGCGATTGTCGCTTGGT
TTCTCTTCCAGGTGTTGCTTGAGCGGGTGCTGCCGGGAGAAATCGCGTTG
GGCGTGCCGCTGCCTGGCACAGAAGGAAAGAGGCTGCCTTATAAATTGAA
TGGACATTTGGCGTTTTGGATTACTTTGCTAGTGATGGGGCATGGATGTC
CGAAATTTGCATCTCCTGTGTTGGAAGAAGTAGGTATCAAGCCGTCGGTA
GCGATGGACGAGGGGGATGAAGTGCAGCAGGTCTTGGGAGAGGTGGGGGA
GGTGATGACACAGGCGGCAGAAGAGGTGATCAGAGGAGGACGAGTGCTTG
GGGGGGCATTGATGCAGGCGACAGAAGGGATTGCAGCGAGGGAATGGCAA
ATCCCGGCTTGGGAAGATTTGATGGGGTTTGGAGCGTTTCCGCTTGAACA
GTTGTATGATCGCTTCCCGCAGTTTGCGTTTGCTGCTGTTGTCTTTTCGT
TTGGCCTGGCGTTGTGTCTATATGTGCTTAGTTTCCGGAGGGGTGTGTTG
TTGGCCGAGGGGGGGAAGAGTGGGAACATCCTATACGATTTTTACATAGG
GAGGGAACTGAACCCGAGGAGTGGGGGATTTGATTGGAAATACTTTTGTG
AGCTTCGGCCTGGGCTGATTGGATGGGTGGTGCTCAATTTGGGGATGTTG
ATGAAGCAGCAGCAGCTGCAGCAGGTCACGGGGGAGGGTATAAGTTGGCC
GCTGGTGCTTGTTTGTGTGTTTCAGGGGTGGTATGTTCTGGATGCCCTCT
TGAACGAACGGGCTATTCTGACGACAATGGATATCACGACGGATGGATTT
GGATTCATGCTTGCGTTTGGGGATTTGGCCTGGGTGCCATTTACGTACTC
AATGCAAGCGAGATATTTGGTGGGGAGGCCTGTGAGCGTTGGCGGATGGG
TTGCAGGGTGTCTGGCGGGGCTGCATTTGTTGGGGTATTGGATTTTTAGG
CGGGCGAATAGTATAAAGGATGTGTTTAGGAGAGACCCCGGAAGTGTTCC
GCACGTGAAGTATTTGGAAACGGCGCGAGGGACGAAGTTGATGATCAGTG
GGTGGTGGGGCTGGGCGCGTAAGATTAATTACACGGGGGATTGGATGATG
AGTTTGGCGTGGTGTGGGTTGTGTGGGCCGGTGCACGTGTTGCCATACTT
TTATGCGATCTATTTTGGGGTCTTGCTAGTGCACCGGGCGGCGAGAGACG
ATCATTTGTGTGCGTTGAAGTATGGGGACGATTGGAAGCAGTATAAAAAG
GAGGTAAGGTGGTTATTTTTTCCGGGGGTGTACTAA
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protein sequence of NO07G01540.1

>NO07G01540.1-protein ID=NO07G01540.1-protein|Name=NO07G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MVSTRARRSPGDKKAASAVAAATLKAPKRRATMASTASAAPTTPGPVSRS
ASPSGNKAPKSRVDPPPPQQEVDAAPKPKQIKVKMPGKAATKPPSANPAS
PLFEYEFGGPWGALCIVVGLPVVVLGLYYCCPNYVSSFSPSSSASSPFSF
QSSSSPLACLRWTDLTYFLITTLPATLKGYALEINSSPTEAAHALLCYLK
TLPSFAQSKGIEMINLVKNELWDPMAFLAIVAWFLFQVLLERVLPGEIAL
GVPLPGTEGKRLPYKLNGHLAFWITLLVMGHGCPKFASPVLEEVGIKPSV
AMDEGDEVQQVLGEVGEVMTQAAEEVIRGGRVLGGALMQATEGIAAREWQ
IPAWEDLMGFGAFPLEQLYDRFPQFAFAAVVFSFGLALCLYVLSFRRGVL
LAEGGKSGNILYDFYIGRELNPRSGGFDWKYFCELRPGLIGWVVLNLGML
MKQQQLQQVTGEGISWPLVLVCVFQGWYVLDALLNERAILTTMDITTDGF
GFMLAFGDLAWVPFTYSMQARYLVGRPVSVGGWVAGCLAGLHLLGYWIFR
RANSIKDVFRRDPGSVPHVKYLETARGTKLMISGWWGWARKINYTGDWMM
SLAWCGLCGPVHVLPYFYAIYFGVLLVHRAARDDHLCALKYGDDWKQYKK
EVRWLFFPGVY*
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Synonyms
Publications