NO07G01340, NO07G01340 (gene) Nannochloropsis oceanica

Overview
NameNO07G01340
Unique NameNO07G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1538
Alignment locationchr7:422710..424247 -

Link to JBrowse

Properties
Property NameValue
DescriptionChord family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:422710..424247 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007051CHORD
Homology
BLAST of NO07G01340 vs. NCBI_GenBank
Match: EWM27241.1 (chord family protein [Nannochloropsis gaditana])

HSP 1 Score: 446.4 bits (1147), Expect = 8.200e-122
Identity = 222/356 (62.36%), Postives = 268/356 (75.28%), Query Frame = 0
Query:    1 MKLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAEQPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACCTKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLDGSEESSRFFESHARKRE 357
            MKLY HYEE   AG  ++ KALTLKLTLPKSW  QPLLQVLELF+E+YN KK  L PLD   VH+EKA G+ +   +IV D+LSDRDD+Y++ G   PA+ K                          A++E STGLLRCKNYGCNQSF++E N+E ACRFH+APPVFHDTKKGW+CC KRVYDWDEFHTIEGC TGRHS +DPKE+FAPSPTLAAA QA   G      +++T +KSI+++NQ+NP+AA A K+AA S+T+   RCTVK DGSATCLNKGCQK++ +KENHP+AC YHA+GPVFHDAGK+WSCCPG +KYDF++FLKIPGCM+SSH DGS+ES   F  HA+  E
Sbjct:    1 MKLYVHYEE---AG--QDEKALTLKLTLPKSWAEQPLLQVLELFIESYNKKKTGLPPLDKDFVHMEKAGGVILPVGNIVSDMLSDRDDLYIRSG-PGPARGKIAHLSSPPNAH---------------ASSESSTGLLRCKNYGCNQSFSEENNSEEACRFHKAPPVFHDTKKGWSCCAKRVYDWDEFHTIEGCTTGRHSLIDPKEIFAPSPTLAAAAQA-ERGDCSNTSSAATVIKSIDEFNQSNPNAAAACKTAA-SMTQAGTRCTVKPDGSATCLNKGCQKDYLLKENHPSACRYHAAGPVFHDAGKYWSCCPGTVKYDFDDFLKIPGCMLSSHYDGSQESLEAFTRHAKTSE 333          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: XP_024577668.1 (chord family protein [Plasmopara halstedii] >CEG41299.1 chord family protein [Plasmopara halstedii])

HSP 1 Score: 282.0 bits (720), Expect = 2.700e-72
Identity = 150/336 (44.64%), Postives = 194/336 (57.74%), Query Frame = 0
Query:    6 HYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAEQPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGS-DAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            HYE      D  E + LTLK+ LP  W G  +  + + F+E+YN KK     LD + +HLEK     +   +++   +   DD+++K G   P   +                          A+        +CKN+GC + + +E N++ ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C TGRHS + P E FA SPT+AAA  A AN  S   P ASS  LKSIEDYNQ NPDA TA  +A SS T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDAGKFWSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:    2 HYE------DGTEVQTLTLKMVLPSKWAGHTVDYLKDFFVEHYNTKKPE-NVLDATEMHLEKKGNAILFGDELLHTAVQKYDDLFLKPGKSMPKPVR---------------------AQNSAASVTSDAKYKQCKNHGCQKKYLEEENSDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCVTGRHSDVGPNEKFAASPTVAAAENAAANSASATVPPASS--LKSIEDYNQKNPDAVTAVSAAKSSQTAPPPK---RTDGKANCVNYGCQQEYVVVENTDTSCKHHAGPPVFHDAGKFWSCCPKDVKYDFDSFLKVPGCVVSAHTD 304          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: CBN76880.1 (chp-1 / RAR1 homologue [Ectocarpus siliculosus])

HSP 1 Score: 279.6 bits (714), Expect = 1.300e-71
Identity = 172/352 (48.86%), Postives = 227/352 (64.49%), Query Frame = 0
Query:    1 MKLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEK-------ADGMKIHTTDIVMDILSDRDDVYVKHGAEQPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACCTKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLDGSEESS 346
            MK+Y H+EE  DA        +TLKLTLPK W  +  +++L+LF+++YN +K     LD+   HLE        A+   +   D +   ++DR DV+V+ GA +  +  XXXXXXXXXXXXXXXXXXXXXXXXX        G LRC+N+GCNQ + +  N+++ACRFH  PP+FHDT+KGW+CC KRVYDWDEF  ++GC  GRHST+DPK+   P+P  A    A       AP      LKSI++YN  NP+AATAA SA  S+T  + +CT + DG+A+C+N GCQK+F V EN   +C YH   PVFHD GK W CCP  +KY+FE+F+ +PGC +  H D S E S
Sbjct:    1 MKVYVHFEEGSDA-----ELHVTLKLTLPKKWNDESPVRLLKLFIDSYNKRKPD-NQLDVDECHLETGASLDQGAEEQALAKGDTIGATITDRADVFVRPGATK--EGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAGALRCRNFGCNQYYDEADNSDTACRFHTGPPIFHDTRKGWSCCKKRVYDWDEFEQLQGCQVGRHSTVDPKDRLPPNPPSAEQEVA----AKPAP-----VLKSIDNYNAENPEAATAAGSAVKSIT-AKKKCTRRPDGTASCVNLGCQKDFVVAENQRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFMAVPGCCIGFHDDASGEFS 334          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: ETP35701.1 (hypothetical protein F442_16203 [Phytophthora parasitica P10297])

HSP 1 Score: 271.6 bits (693), Expect = 3.600e-69
Identity = 145/341 (42.52%), Postives = 193/341 (56.60%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK + + +   +++   +   DD+++K GA   +P + +                          A        L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS L P E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNVVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ-----------------------KSAAAATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSELGPNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 320          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: ETK77986.1 (hypothetical protein L915_15901 [Phytophthora parasitica] >ETL31420.1 hypothetical protein L916_15796 [Phytophthora parasitica])

HSP 1 Score: 270.8 bits (691), Expect = 6.200e-69
Identity = 145/341 (42.52%), Postives = 192/341 (56.30%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK +   +   +++   +   DD+++K GA   +P + +                          A        L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS L P E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNAVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ-----------------------KSAAAATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSELGPNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 320          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: ETL84678.1 (hypothetical protein L917_15595 [Phytophthora parasitica] >ETO60727.1 hypothetical protein F444_21118 [Phytophthora parasitica P1976] >ETP07671.1 hypothetical protein F441_16169 [Phytophthora parasitica CJ01A1] >KUF87512.1 Cysteine and histidine-rich domain-containing protein [Phytophthora nicotianae])

HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68
Identity = 144/341 (42.23%), Postives = 192/341 (56.30%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK +   +   +++   +   DD+++K GA   +P + +                          A        L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS + P E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNAVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ-----------------------KSAAAATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSEVGPNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 320          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: XP_008911470.1 (hypothetical protein PPTG_16376 [Phytophthora parasitica INRA-310] >ETN03354.1 hypothetical protein PPTG_16376 [Phytophthora parasitica INRA-310])

HSP 1 Score: 269.6 bits (688), Expect = 1.400e-68
Identity = 144/341 (42.23%), Postives = 192/341 (56.30%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK +   +   +++   +   DD+++K GA   +P + +                          A        L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS + P E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNAVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ-----------------------KSAAAATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSKVGPNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 320          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: KUF89444.1 (U3 small nucleolar ribonucleoprotein IMP3 [Phytophthora nicotianae])

HSP 1 Score: 269.2 bits (687), Expect = 1.800e-68
Identity = 144/341 (42.23%), Postives = 192/341 (56.30%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK +   +   +++   +   DD+++K GA   +P + +                           T       L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS + P E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   29 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNAVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ---------------------------TATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSEVGPNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 331          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: ETI37773.1 (hypothetical protein F443_16350 [Phytophthora parasitica P1569] >ETM37820.1 hypothetical protein L914_15746 [Phytophthora parasitica])

HSP 1 Score: 265.8 bits (678), Expect = 2.000e-67
Identity = 143/341 (41.94%), Postives = 191/341 (56.01%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + VHLEK +   +   +++   +   DD+++K GA   +P + +                          A        L+CKN+GC + F +E N + ACR H  PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS +   E FA SPT+A                ++  LKSIEDYNQ NP+A TA  +A  S T P  +   + DG A C+N GCQ+E+ V EN  T+C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NVLDATQVHLEKKNNAVLFGDELLHTAVQKYDDLFLKAGASTLKPVRVQ-----------------------KSAAAATSDKKYLQCKNHGCQKKFLEEENNDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIIGRHSEVGLNEQFAASPTVAXXXXXXXXXXXXXXXXTA-PLKSIEDYNQKNPNAVTAVSAAKDSQTAPPPK---RTDGKANCVNYGCQQEYVVAENTETSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHTD 320          
BLAST of NO07G01340 vs. NCBI_GenBank
Match: XP_009539001.1 (hypothetical protein PHYSODRAFT_534209 [Phytophthora sojae] >EGZ05470.1 hypothetical protein PHYSODRAFT_534209 [Phytophthora sojae])

HSP 1 Score: 264.2 bits (674), Expect = 5.800e-67
Identity = 142/341 (41.64%), Postives = 188/341 (55.13%), Query Frame = 0
Query:    2 KLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNNKKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAE--QPAKAKXXXXXXXXXXXXXXXXXXXXXXXXXGATTEGSTGLLRCKNYGCNQSFAQETNTESACRFHRAPPVFHDTKKGWACC-TKRVYDWDEFHTIEGCATGRHSTLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAATAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHASGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLD 340
            K+Y HY+E        EA+ LTLK+TLP  W G  +  + E F+E+YNNKK     LD + +HLEK         +++   +   DD+++K GA   +P K +                          A       LL+CKN+GC + FA+E N + ACR HR PP+FHD KKGW CC +K VYDWD+F  IE C  GRHS + P E FA SPT+AAA                       DYNQ NPDA TA  +A  + T P  +   + DG A C+N GCQ+E+ V +N  ++C +HA  PVFHDA K+WSCCP  +KYDF+ FLK+PGC+VS+H D
Sbjct:   14 KVYMHYDEG------SEAQTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPD-NTLDAAQMHLEKKGNNAPFGDELLHTAVQKYDDLFLKAGASTLKPVKVQ-----------------------KSAAPATSDKKLLQCKNHGCQKKFAEEENNDQACRHHRLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCVVGRHSVVGPNEQFAASPTVAAAE--NXXXXXXXXXXXXXXXXXXXDYNQKNPDAVTAVSAAKENQTVPAPK---RTDGKANCVNFGCQQEYVVADNTDSSCRHHAGAPVFHDASKYWSCCPKDVKYDFDSFLKVPGCVVSAHSD 319          
The following BLAST results are available for this feature:
BLAST of NO07G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27241.18.200e-12262.36chord family protein [Nannochloropsis gaditana][more]
XP_024577668.12.700e-7244.64chord family protein [Plasmopara halstedii] >CEG41... [more]
CBN76880.11.300e-7148.86chp-1 / RAR1 homologue [Ectocarpus siliculosus][more]
ETP35701.13.600e-6942.52hypothetical protein F442_16203 [Phytophthora para... [more]
ETK77986.16.200e-6942.52hypothetical protein L915_15901 [Phytophthora para... [more]
ETL84678.11.400e-6842.23hypothetical protein L917_15595 [Phytophthora para... [more]
XP_008911470.11.400e-6842.23hypothetical protein PPTG_16376 [Phytophthora para... [more]
KUF89444.11.800e-6842.23U3 small nucleolar ribonucleoprotein IMP3 [Phytoph... [more]
ETI37773.12.000e-6741.94hypothetical protein F443_16350 [Phytophthora para... [more]
XP_009539001.15.800e-6741.64hypothetical protein PHYSODRAFT_534209 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL097nonsL097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR137ngnoR137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000745NSK000745Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01340.1NO07G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|661672gene_2455Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100038g26gene3303Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01340.1NO07G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01340 ID=NO07G01340|Name=NO07G01340|organism=Nannochloropsis oceanica|type=gene|length=1538bp
ATGAAGCTCTACTTCCACTACGAGGAGACCGACGACGCGGGTGATGTCGA
GGAAGCAAAAGCCTTAACTCTTAAACTCACACTACCAAAAAGCTGGGTGG
GACAGCCGCTGCTCCAAGTGCTGGAGCTCTTTCTTGAGAACTATAACAAC
AAGAAGGCCAGGCTCGAACCTTTGGACATATCCGGAGTGCATCTGGAAAA
AGCAGAgtaagctcaaaaatcttccttctatctatgtgtcgcatgctcgc
atgcactctgtcatgcttcaaggctcgggctaaatgtcacaatgccctcg
cacgtgccgccaaggcatttcacgctcacactttattcttccttataatc
ctcttcctcctcgtccagCGGTATGAAAATCCACACCACTGATATCGTGA
TGGATATTCTGAGTGATCGCGATGACGTGTACGTCAAACATGGGGCGGAA
CAACCAGCCAAGGCAAAGCGTACCCCGCCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTATCCCTGGAGCCA
CCACAGAAGGTAGCACCGGCCTGCTGCGCTGCAAGAACTACGGATGCAAC
CAGTCTTTTGCCCAAGAGACCAACACGGAGTCAGCCTGCCGCTTCCATAG
GGCCCCCCCCGTGTTTCACGACACGAAGAAAGGTTGGGCTTGTTGCACGA
AGCGGGTTTATGACTGGGACGAGTTCCATACGgtacgtttcggctgtcct
ctgtttggattgatcgatatgtgtcgccctttgctaattttcagagtgca
gcaagtgcatggatcgcctctctgactgtcctcttccttttctcctccaa
aaaatgtcccccctcaagATCGAGGGCTGTGCCACCGGCCGACACAGCAC
CTTGGATCCCAAGGAGGTCTTTGCCCCATCGCCTACTCTCGCAGCCGCTA
ATCAAGCTGGAGCTAATGGAGGAAGTGATGCCCCCGGCGCTTCTTCTACG
GCCCTCAAGTCCATCGAGGACTACAACCAAGCGAACCCCGATGCTGCCAC
TGCTGCCAAAAGCGCGGCGTCGTCAGTGACCAAGCCTCAGGCCAGGTGCA
CCGTCAAGGCGGACGGGTCGGCCACGTGTCTGAATAAGGGATGTCAAAAG
GAGTTTCAAGTCAAGGAGAACCACCCAACGGCTTGCTGgtacgtggagag
tcaaagtcgtatttttatatatcatgccgtcccttcctcccttcctcgcg
cacagcgcatccgcaccgcatcaccctctctctcgctctctcttggctga
cgttttgccttctctttccctgcgtcttcttcccaccctaaccctataaa
gCTACCACGCGTCCGGACCCGTCTTTCACGACGCGGGCAAGTTCTGGTCC
TGTTGTCCCGGGGTGATCAAGTACGACTTTGAGGAATTTTTGAAAATTCC
CGGATGTATGGTTAGTAGCCACCTTGATGGGAGCGAGGAGAGTTCGCGGT
TTTTCGAGTCGCATGCGAGAAAAAGGGAAGATCGGTGA
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protein sequence of NO07G01340.1

>NO07G01340.1-protein ID=NO07G01340.1-protein|Name=NO07G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp
MKLYFHYEETDDAGDVEEAKALTLKLTLPKSWVGQPLLQVLELFLENYNN
KKARLEPLDISGVHLEKADGMKIHTTDIVMDILSDRDDVYVKHGAEQPAK
AKRTPPSSSSSSSSSSSSSSSSSSSIPGATTEGSTGLLRCKNYGCNQSFA
QETNTESACRFHRAPPVFHDTKKGWACCTKRVYDWDEFHTIEGCATGRHS
TLDPKEVFAPSPTLAAANQAGANGGSDAPGASSTALKSIEDYNQANPDAA
TAAKSAASSVTKPQARCTVKADGSATCLNKGCQKEFQVKENHPTACCYHA
SGPVFHDAGKFWSCCPGVIKYDFEEFLKIPGCMVSSHLDGSEESSRFFES
HARKREDR*
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Synonyms
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