NO07G01330, NO07G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01330 vs. NCBI_GenBank
Match: KUF90339.1 (Vesicle-associated membrane protein 7B [Phytophthora nicotianae]) HSP 1 Score: 97.8 bits (242), Expect = 3.900e-17 Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + +++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEVEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_024574906.1 (vesicle-associated membrane protein 7b [Plasmopara halstedii] >CEG38537.1 vesicle-associated membrane protein 7b [Plasmopara halstedii]) HSP 1 Score: 97.1 bits (240), Expect = 6.600e-17 Identity = 57/176 (32.39%), Postives = 94/176 (53.41%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAY-------NTIIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVA + + N D+N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C ++ + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 14 NIKFLAIARATDKVIVACYMHTAGKPVRNGEGDMNVFREMLSKVIRAPTWKTQVTPNGRHSLDCDPNKFHFTMNNDELVFAAITSKDYPIRLAFQMISAIQTEIIPKFGSKALTCRENGLDKDCAKIFTAIAAGYDDRTKVDKLSDVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 189
BLAST of NO07G01330 vs. NCBI_GenBank
Match: ETI50647.1 (hypothetical protein F443_05805 [Phytophthora parasitica P1569] >ETL97173.1 hypothetical protein L917_05497 [Phytophthora parasitica] >ETM50327.1 hypothetical protein L914_05615 [Phytophthora parasitica] >ETO79470.1 hypothetical protein F444_05853 [Phytophthora parasitica P1976]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 56/177 (31.64%), Postives = 94/177 (53.11%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + ++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEAEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: ETP20422.1 (hypothetical protein F441_05810 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 56/177 (31.64%), Postives = 94/177 (53.11%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + ++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEAEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: ETP48421.1 (hypothetical protein F442_05850 [Phytophthora parasitica P10297]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 56/177 (31.64%), Postives = 94/177 (53.11%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + ++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEAEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_008608245.1 (hypothetical protein SDRG_04350 [Saprolegnia diclina VS20] >EQC38653.1 hypothetical protein SDRG_04350 [Saprolegnia diclina VS20]) HSP 1 Score: 95.1 bits (235), Expect = 2.500e-16 Identity = 62/174 (35.63%), Postives = 94/174 (54.02%), Query Frame = 0 Query: 6 SSGNIQFLGVARLQDRAIVASHAY------NTIIDLNGVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 +S N++FL VAR D+AI+AS+A+ + L+ + +VL + + V P + + +H D + +++ I+ YPVR A L +Q K K VKE GLDK C + L + YDD +VDKLA VM +VD+VK +QEN+QV L+N +E +E Sbjct: 4 TSDNVKFLAVARGSDKAIIASYAHTKKDKEESPKYLDMLTKVLRAPTWKQQVAPNSRHTLDCEPNKFHFTMDNDEIVYVAITAADYPVRLAFKLLAAVQEEMTGKHAAKLPTVKEGGLDKECAKGLSVIATTYDDRTKVDKLAEVMAQVDAVKSTMQENIQVVLSNTEKMEMVE 177
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_002909510.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58324.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 95.1 bits (235), Expect = 2.500e-16 Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASH--------AYNTIIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ A ++ +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + L + YDD +VDKL+ VMN+VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHPSGGKPARGGEAEMATFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTDVVPKFGSKALTCRENGLDKDCAKALAGIATGYDDRTKVDKLSEVMNQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: OWZ22388.1 (hypothetical protein PHMEG_0002919 [Phytophthora megakarya]) HSP 1 Score: 92.4 bits (228), Expect = 1.600e-15 Identity = 55/176 (31.25%), Postives = 93/176 (52.84%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYN-------TIIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVA + ++ +++ KE+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVACYMHSGGKPSRGGENEMSTFKEMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEVVPKFGSKALTCRENGLDKDCAKAFAAIAATYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 190
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_009821387.1 (hypothetical protein H257_00405 [Aphanomyces astaci] >ETV88987.1 hypothetical protein H257_00405 [Aphanomyces astaci]) HSP 1 Score: 89.4 bits (220), Expect = 1.400e-14 Identity = 59/177 (33.33%), Postives = 89/177 (50.28%), Query Frame = 0 Query: 6 SSGNIQFLGVARLQDRAIVASHAYNTIIDLNGVKEVLTSDQLS-----------VRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 S N++FL VAR D+ IVAS+A+ + K V D LS V P + + +H D + ++ I+ YP+R A + +Q K G K + KE GLD CG+ L + YDD +VDK++ VM +VD+VK +Q+N+QV L+N +E +E Sbjct: 4 SHDNVKFLAVARASDKVIVASYAHTKKDKEDSPKYV---DMLSKVLRAPTWKQQVTPNSRHTLDCDPNKFHFTMDNDEMVYCAITAADYPIRLAFKLITAVQEEVSGKHGAKLAQAKENGLD--CGKSLGVIATMYDDRTKVDKVSEVMAQVDAVKSTMQDNIQVVLSNTEKMELVE 175
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_005818371.1 (vesicle-associated membrane protein 7B [Guillardia theta CCMP2712] >EKX31391.1 vesicle-associated membrane protein 7B [Guillardia theta CCMP2712]) HSP 1 Score: 83.6 bits (205), Expect = 7.600e-13 Identity = 53/172 (30.81%), Postives = 92/172 (53.49%), Query Frame = 0 Query: 8 GNIQFLGVARLQDRAIVASHAYNTIID-----LNGVKEVLTSDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAA 175 GN+++ + R+ DR +VA++ + T L ++VL+SD++ + A S + +D + ++I+ E+SYP R A L +++ F K T++ E + KT + + C KYDDL V+K+AAV +VD VK+ +++NVQ L LE++E A Sbjct: 27 GNVRYAAIGRISDRVLVATYHHFTAGPPSAKYLAVAQKVLSSDKVLSQQSANVPNAVEDSCCLMQAD-KKYMYIVFVEKSYPERTAFELLRMIRKDFTDKDATQAESATENSMSKTVKKWMSAACTKYDDLTSVNKVAAVQAQVDDVKMTMEDNVQQMLRQHEKLEDLEDKA 197 The following BLAST results are available for this feature:
BLAST of NO07G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01330 ID=NO07G01330|Name=NO07G01330|organism=Nannochloropsis oceanica|type=gene|length=1720bpback to top protein sequence of NO07G01330.1 >NO07G01330.1-protein ID=NO07G01330.1-protein|Name=NO07G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO07G01330.2 >NO07G01330.2-protein ID=NO07G01330.2-protein|Name=NO07G01330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO07G01330.3 >NO07G01330.3-protein ID=NO07G01330.3-protein|Name=NO07G01330.3|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top Synonyms
Publications
|