NO07G01330, NO07G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01330 vs. NCBI_GenBank
Match: EWM27266.1 (r-snare vamp72-family [Nannochloropsis gaditana]) HSP 1 Score: 295.0 bits (754), Expect = 1.700e-76 Identity = 148/174 (85.06%), Postives = 163/174 (93.68%), Query Frame = 0 Query: 1 MAEHRSSGNIQFLGVARLQDRAIVASHAYNTIIDLNGVKEVLTSDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAA 175 MAE ++SGNI FLGVAR QDRAIVASHAYNT+IDL GVKEVL SDQLSVRPGV+FSFASGGS+WHL+SDVEGRIFILISER+YPVRAA+ACL++ QRSFL KTGTKSLEVKEKGLDK+ GEMLRKLCEKYD+L +VDKLAAVMNKVD+VKLVLQENVQVALANCV L+NIE AA Sbjct: 1 MAERKASGNIHFLGVARFQDRAIVASHAYNTVIDLTGVKEVLKSDQLSVRPGVHFSFASGGSSWHLMSDVEGRIFILISERTYPVRAAHACLEEFQRSFLAKTGTKSLEVKEKGLDKSSGEMLRKLCEKYDNLAEVDKLAAVMNKVDAVKLVLQENVQVALANCVALDNIEKAA 174
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CBN77436.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein [Ectocarpus siliculosus]) HSP 1 Score: 117.1 bits (292), Expect = 6.200e-23 Identity = 65/168 (38.69%), Postives = 94/168 (55.95%), Query Frame = 0 Query: 7 SGNIQFLGVARLQDRAIVASHAYNTIIDLNGVKEVLTSDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAA 175 S I FLGV R DR +VA ++ + D +KE++++ V P +S + H V+D RI+ ++++ YP R A L++ Q FL K G KSL KE GL +T LC KYDD+ VD++AAV +KVD VK+ +Q+N+Q LAN L+ I A Sbjct: 2 SRRITFLGVIRFTDRVLVAGYSPSEADDSLIIKELMSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENA 169
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CCA17529.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 102.1 bits (253), Expect = 2.100e-18 Identity = 63/203 (31.03%), Postives = 109/203 (53.69%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAY----NTIIDL-------NGVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAAG-----MYICTGGGKRKRGSLFFK 194 NI+F+GVAR D+AI+ + + +T +DL +VL + + V P S + +H + +F +I+ +SYP+R A + LQ+ F+ K TK+L +E GLDK C M++ L +YDD +VDK++ V+++VD+VK V+ N+QV L+N +E +E + G++ R ++++K Sbjct: 42 NIKFIGVARATDKAIICCYFHSAKASTNVDLAECAKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALNCREHGLDKECKSMMQTLANQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWK 244
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CCI47366.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 60/203 (29.56%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNTIIDLN-----------GVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAAG-----MYICTGGGKRKRGSLFFK 194 NI+F+G+AR D+AI+ + ++ +N +VL + + V P S + +H + +F +I+ +SYP+R A + LQ+ F+ K TK+L +E GLDK C M++ L +YDD +VDK++ V+++VD+VK V+ N+QV L+N +E +E + G++ R ++++K Sbjct: 535 NIKFIGIARATDKAIICCYFHSNKSSMNVDLAECTKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALSCREHGLDKECKSMVQALATQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWK 737
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CCI47367.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 60/203 (29.56%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNTIIDLN-----------GVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAAG-----MYICTGGGKRKRGSLFFK 194 NI+F+G+AR D+AI+ + ++ +N +VL + + V P S + +H + +F +I+ +SYP+R A + LQ+ F+ K TK+L +E GLDK C M++ L +YDD +VDK++ V+++VD+VK V+ N+QV L+N +E +E + G++ R ++++K Sbjct: 466 NIKFIGIARATDKAIICCYFHSNKSSMNVDLAECTKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALSCREHGLDKECKSMVQALATQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWK 668
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CCI47368.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 60/203 (29.56%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNTIIDLN-----------GVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAAG-----MYICTGGGKRKRGSLFFK 194 NI+F+G+AR D+AI+ + ++ +N +VL + + V P S + +H + +F +I+ +SYP+R A + LQ+ F+ K TK+L +E GLDK C M++ L +YDD +VDK++ V+++VD+VK V+ N+QV L+N +E +E + G++ R ++++K Sbjct: 462 NIKFIGIARATDKAIICCYFHSNKSSMNVDLAECTKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALSCREHGLDKECKSMVQALATQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWK 664
BLAST of NO07G01330 vs. NCBI_GenBank
Match: CCI47369.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 100.5 bits (249), Expect = 6.000e-18 Identity = 60/203 (29.56%), Postives = 107/203 (52.71%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNTIIDLN-----------GVKEVLTSD--QLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIESAAG-----MYICTGGGKRKRGSLFFK 194 NI+F+G+AR D+AI+ + ++ +N +VL + + V P S + +H + +F +I+ +SYP+R A + LQ+ F+ K TK+L +E GLDK C M++ L +YDD +VDK++ V+++VD+VK V+ N+QV L+N +E +E + G++ R ++++K Sbjct: 432 NIKFIGIARATDKAIICCYFHSNKSSMNVDLAECTKWKEMYAKVLRAPTWKTQVTPNARHSLDCDPNKFHFSMSNDELVFAVITVKSYPIRLAFQLIQTLQQEFVPKFATKALSCREHGLDKECKSMVQALATQYDDRTKVDKISEVLHQVDNVKSVMHTNIQVVLSNTEKMEVVEQKTNDLSEQAKVFRNSGRKLRKAMWWK 634
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_009514194.1 (hypothetical protein PHYSODRAFT_348837 [Phytophthora sojae] >EGZ26919.1 hypothetical protein PHYSODRAFT_348837 [Phytophthora sojae]) HSP 1 Score: 98.6 bits (244), Expect = 2.300e-17 Identity = 55/177 (31.07%), Postives = 96/177 (54.24%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVL------TSDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+F+ +AR D+ +VA + +++ ++N KE+L + + V P S + +H + + +F I+ + YP+R A + +Q+ + K G+K+L +E GLDK C ++ + KYDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFMAIARATDKVVVACYMHSSDGKPARGGEAEMNTFKEMLGKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQQEVVPKFGSKALTCRENGLDKDCAKLFASIAAKYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: ETK90609.1 (hypothetical protein L915_05672 [Phytophthora parasitica]) HSP 1 Score: 97.8 bits (242), Expect = 3.900e-17 Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + +++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEVEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191
BLAST of NO07G01330 vs. NCBI_GenBank
Match: XP_008903319.1 (hypothetical protein PPTG_10394 [Phytophthora parasitica INRA-310] >ETL44021.1 hypothetical protein L916_05611 [Phytophthora parasitica] >ETN11528.1 hypothetical protein PPTG_10394 [Phytophthora parasitica INRA-310] >KUF98278.1 hypothetical protein AM588_10010877 [Phytophthora nicotianae]) HSP 1 Score: 97.8 bits (242), Expect = 3.900e-17 Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 9 NIQFLGVARLQDRAIVASHAYNT--------IIDLNGVKEVLT------SDQLSVRPGVYFSFASGGSAWHLVSDVEGRIFILISERSYPVRAANACLDDLQRSFLIKTGTKSLEVKEKGLDKTCGEMLRKLCEKYDDLLQVDKLAAVMNKVDSVKLVLQENVQVALANCVTLENIE 172 NI+FL +AR D+ IVAS+ + + +++N +E+L+ + + V P S + +H + + +F I+ + YP+R A + +Q + K G+K+L +E GLDK C + + YDD +VDKL+ VM++VD VK V+ N+QV L+N +E +E Sbjct: 15 NIKFLAIARATDKVIVASYMHQSGGKPARGGEVEVNTFREMLSKVIRAPTWKTQVTPNGRHSLECDPNKFHFTMNNDELVFAAITAKDYPIRLAFQMISAVQTEIVPKYGSKALTCRENGLDKDCAKAFAAIASGYDDRTKVDKLSEVMHQVDGVKTVMHNNIQVVLSNTEKMEVVE 191 The following BLAST results are available for this feature:
BLAST of NO07G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01330 ID=NO07G01330|Name=NO07G01330|organism=Nannochloropsis oceanica|type=gene|length=1720bpback to top protein sequence of NO07G01330.1 >NO07G01330.1-protein ID=NO07G01330.1-protein|Name=NO07G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top protein sequence of NO07G01330.2 >NO07G01330.2-protein ID=NO07G01330.2-protein|Name=NO07G01330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO07G01330.3 >NO07G01330.3-protein ID=NO07G01330.3-protein|Name=NO07G01330.3|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top Synonyms
Publications
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