NO07G01280, NO07G01280 (gene) Nannochloropsis oceanica

Overview
NameNO07G01280
Unique NameNO07G01280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2364
Alignment locationchr7:405801..408164 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:405801..408164 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G01280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL097nonsL097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR137ngnoR137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000739NSK000739Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01280.1NO07G01280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01280.1NO07G01280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01280 ID=NO07G01280|Name=NO07G01280|organism=Nannochloropsis oceanica|type=gene|length=2364bp
ACAGCACATACAGCCACACACAGCATGAAGCACCACGACCGCAACCACGA
GGAAGGAAAAGGAAGCGAAAATGACAATGATGAGATGAAAGAGGAGGAGA
AGCAGCGGCATGAGGAGGAGGAACACTACGGTCTGCCTCCCTTCCCCTAC
CAGATCACCCACACCCCCGGCGGCGGCAGCAGCGGCGGCGGGCTCGTGGC
AACCCTCCTTCATACGGCCCAGCTGCAGGAATGGGAGGCCTTCCGCAAAG
AAATAGCGGTGGCTCGTGCCACTGCCAAAGAACGCGAGGTGCGATTGGCG
GCGATGAAGCGAATGGAGGAGACGCGCACCAGGGATCTGGAAGCCATGGA
GACCAAACTTCGGCAGTTGCAGCAGGAGCTGGACGAAGCCCGCAAGGCAG
CCGCTGCTCCTTACGCCAACGGACATTCTTCCTCCTCCTCATCCCGTACA
TTTGTCGGACAATTTGGCAAGCAGATGCAAGCGCTGCAAAGACAAGTCCA
CTCACTCACCACCTCCCTCCCCCAGCTTGAAGCCCGTATGTCCACCCTCA
CCGGGCGTGACGCTGCCGACACGAAGGCACGAGCCGCCTGCACCGCCGGG
CTAGAACAATGCCACATGTTGCTTCAGTCCTCTCAAACCGCGGCAGACTC
GGCACTAGCTCAGTCCCAACGACTCGGAGCGGCCCTCACGCGCGTCACCC
AGGAAAAAGAAAAGCTCACCGTGCAAGTCCAAGAGCACACAGCGCGGGAA
GCAAATCTAATTGAAACCCTACGTCACAAAGAAAGAACACTCCAGGAAAC
ATACAGTAATGAGAAAGAGGCCGTGCAAGCCCTAGACAAGGAACGGGTGA
CCAGCCGTCAAAAGGACGAAGAGATCACCTCCCTCCTCACCGAGCTCTCA
GCCGTGCGCGCCCGAAATCTCGACCTCTCCTTCCGCCTCAACGAAGCAGC
AGAAGCGCGTGAAGACGCTCACCGGCTTCGAATTGAGCTTGATGGTTTCA
ACGCTACCTTAGGTGAGAAAGATGAGGCCTTCCAACAAGTGTCGGAAAAG
AAGGTGGAACTAGAACGGCAAGTCGCCAAGCTGGCTCGTAACCTTGAGGA
AGAACACAGGGTAGTGAGGGAGAGGAGGGAGGAAATAGGGGCCCTGAAGA
AGGAGCTGCAGGAGAGCCGGCTTTTGAGTCAGTTGCTGTCGCGAAGGACG
GCTGGAGCGGCTGGTGCTGGTGTTGGTGTGGGGGGCGGGGGGGGAGGAAG
AGGAGGGGGAGAGAAGATGAAGAAGCGACATTTTTCGCGGGCGGTGGTGG
AGGATTATGATGAGGGTGAGCTGACGGAGGCAGGGATGCCGAGAAAATTG
CAGCGACAGCAGCAGCAGCAACAGGTGGGTGAAGGGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGAGGAGGAGGAGGAGAATGAAGAAGAAGAAGAGAAGA
TGGAAAAGGGCCTGCGAAGAACGGGCCGTACTCGAGGACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGGGGGAGGAGGAAGGAAGATTGAAGGAAAA
GAAGGAAAAGGAGATGGATGAAGAAAGGGCGAGCGGGTTGACCGATTGTG
GTGATCCGTTTTTCTTTGGAGAGGAGCAGGAAAAGCTGCAGGTCAAGGCA
CCGACGTCTCAACGATATGCGACGGGAGGGATGGAGAGAGGAGGAGGAGT
GAAACAGCACTTGAACAAGAAGAAGACGACGACGATGAAGAAGAAAAAAA
GGATTGGTGGTGGGAAAAATGGCGCGAATGGAACATGCAAGCAGTGCGAG
CAGAAGCCGTCGGGATTGTCTTATTTGTGTCAGTTGTGCTTACAGGAGGT
GTGTGCGGAGTGCGTGAAAGAGGGTGTGGATGGTGCTGGGCCGACATCCC
GGGGGTTTTTGTGTATGGAATGTCAGTAGTATGATGAAGGGAGGGAGGGA
GGGGAAGAGCGAGGGAAGGAGAGATGGATGGAGGGATGGAGAGAATGAGG
AGTTGTTTATGTGTACTTACCCACCTTTGCATTTGTATACAGCTTTTGTG
AATTGTTTGAATGTTTGTCGGTTCAATCAGTCAACAGATAAATTTGTGCA
CTCGTTTGGGGGGAGGGGGGGGAAGAAGAGAGAGAGAGGGAGAGAGGGAG
ATAAAGAGTGTAAGAGGGAGGGAGGGACAGAGGGTGAAAGATGGAGATTG
AAAAAGGATAAATGCACATTTACATATGCATATATATATATATATATATA
TATATCAAATTTGTGCATGTATGTGTGTATGTTGCAGTCATGACGATGCC
CCTAGAGCAGAAAGATGCAACATGAAAAAATGCAATGAAAGGGGGAGAAG
AAAGAGAGAACGAA
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protein sequence of NO07G01280.1

>NO07G01280.1-protein ID=NO07G01280.1-protein|Name=NO07G01280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MKHHDRNHEEGKGSENDNDEMKEEEKQRHEEEEHYGLPPFPYQITHTPGG
GSSGGGLVATLLHTAQLQEWEAFRKEIAVARATAKEREVRLAAMKRMEET
RTRDLEAMETKLRQLQQELDEARKAAAAPYANGHSSSSSSRTFVGQFGKQ
MQALQRQVHSLTTSLPQLEARMSTLTGRDAADTKARAACTAGLEQCHMLL
QSSQTAADSALAQSQRLGAALTRVTQEKEKLTVQVQEHTAREANLIETLR
HKERTLQETYSNEKEAVQALDKERVTSRQKDEEITSLLTELSAVRARNLD
LSFRLNEAAEAREDAHRLRIELDGFNATLGEKDEAFQQVSEKKVELERQV
AKLARNLEEEHRVVRERREEIGALKKELQESRLLSQLLSRRTAGAAGAGV
GVGGGGGGRGGGEKMKKRHFSRAVVEDYDEGELTEAGMPRKLQRQQQQQQ
VGEGEEEEEKEEEEEEEENEEEEEKMEKGLRRTGRTRGQQQQQQQQQQQG
EEEGRLKEKKEKEMDEERASGLTDCGDPFFFGEEQEKLQVKAPTSQRYAT
GGMERGGGVKQHLNKKKTTTMKKKKRIGGGKNGANGTCKQCEQKPSGLSY
LCQLCLQEVCAECVKEGVDGAGPTSRGFLCMECQ*
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Synonyms
Publications