NO07G01270, NO07G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01270 vs. NCBI_GenBank
Match: EWM27236.1 (cellulose synthase (udp-forming) family gt2 [Nannochloropsis gaditana]) HSP 1 Score: 1060.8 bits (2742), Expect = 1.800e-306 Identity = 512/706 (72.52%), Postives = 594/706 (84.14%), Query Frame = 0 Query: 1 MFQDASDDDITLPSPIQEVDETELD-PEDGFGGASNRIEEVVLEDEAEGDRAQVLKLSPEKKNCIPMA-----PSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRSGKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFRSTYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDDCIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM 701 M + +D++I + SP+QE DETE+D E+G+G +RIEEV+LEDE+E DRA VLKLSP +N P+A + +S ++ TS V+ EMMRVA AGWNEA+ GPTDSP++ED+ES D+QS+RS+YPDPQ QK LLSGR+NQ++ ++N+ FGLVYLCWRVFRSMNP DWHDWAPVG YF+DPEDPER WS+KEEFKYNWFCWLLFVAE+ M+ +WLGHASRCFPSKRTKCTMDELV+IDYELS+ TAVC+V+PTRGE LN+LR+VILN MSLN+WPG LDVRKNARLVV+DDRRRAEVLLL ALCYRFAALFCNNRKVR QLK+EGR+ MSLA+FYDHYL CT GFGQTYADSFIDIFSIADMIHK+CKDDCIP EWDGLELPSGTRIEPK QTDL+KVPRLREDF D+R+ILTLVY+SRPSNEFP SCPVAGMLN LLFPEDPADANILG A+++V NDPRHALQTEFLQRTMPYFFRP+AD EMGTV+Y EC+DVAFVQVALR+ K++KFDTDPLSNR+L+L DIIN+GRDGVGGAMA+ +GCMYRIDVLK GK+ RG++VV EED + LGKG+GFSTL RCEWLPTSV+LF RGFRSVYVNEI+ETLSL F ET +L GRV+EVF+ HLSA+EVLV+DP+GLLKA YTTRMHRLFV+E+L QGFFM Sbjct: 1 MVRRNTDNNIAMSSPMQETDETEIDADEEGYG--CSRIEEVMLEDESERDRAGVLKLSP--RNSAPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKSDNAKEKPGTSAVSAEMMRVAFAGWNEADVGPTDSPVEEDIESADDVQSYRSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLLKARYTTRMHRLFVMEDLWQGFFM 702
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBN77533.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus]) HSP 1 Score: 255.4 bits (651), Expect = 5.300e-64 Identity = 181/580 (31.21%), Postives = 277/580 (47.76%), Query Frame = 0 Query: 153 YPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADS--FIDIFSIADMIHK-LCKDDCIPQEWDGLELPSGTRIEPKLVQTDLAK----------------VPRLREDFDDI----RNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGG-AKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLL-KAEYTTRMHRLFVLEELCQ------GFFMV 702 YPDP + K + ++ V+NV G Y+ WR RSM P+ P SV + WL F E++L G+W H R FPS R C+MD+LVEID +S VCI++PT GE + L+ V+L S +W RL R+ V+D++ R EV + L R A + ++ + R + S + +C F + + F+D F+ D + + + +C P R+E Q LA+ +PRL E F + NI +++Y +R + P P AG +N +FP P + ++G A+ +V ND RH L+TEFLQRT+PYFF+ D G K E DV FVQ R + D DPL N +L + + NV +DGVGG + G ++R+D L+ G A G+ VV + +G GF E TS++ F++ +RS YV E ETL++ ++ + RV++VF H+ A ++L++D VG L + T +H++F L+ L GFF++ Sbjct: 823 YPDPARIKHHPTSFWIKLSAVLNVVAGAAYIWWRATRSM---------------------PDNPKSVV-------WNWLFFAGEVILTFGVWTSHLQRSFPSVRDVCSMDDLVEIDSNVSNEATVCIMVPTAGEKMKNLKHVLLGAYSQRLWVSRLPTSSQLRIAVLDEKGRREV-SVTTLVARGAMGERKSATSWRRCTVWPRPSSS----PPYSRSCAPSFDEPFITPKIFMDYFNQMDALDQYVFGPECHP------AFDMAVRMENYTGQAKLARASSSSGVPGKKKAAKALPRLEEGFKKLFRSSPNIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFK--LDRRTG--KKYEWADVGFVQTPQRF--EDLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALR-GMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRMPTPLHKMFGLDSLTYYIQAVGGFFII 1356
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ31064.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus]) HSP 1 Score: 226.1 bits (575), Expect = 3.400e-55 Identity = 166/615 (26.99%), Postives = 276/615 (44.88%), Query Frame = 0 Query: 138 EDLESPGDIQSFRSTYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFG----QTYADSFI-DIFSIADMIHKLCKDDCIPQEWDGLELPSGTRIEP----------KLVQTDLAKVPRLREDFDDIRN----------------------------------------ILTLVYYSRPSNEFPPSCPVAGMLNGLLFP-EDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADE-EMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLK--AEYTTRMHRLFVLEE 694 ED + ++ R +PQ+++ S + +V+ V N G++YL WR + PT D+ W + ++ L F AE L I +W+G A R FP +R K TMD++ +D ++ + VCI+LPT GE L V+ + ++ +S +W L + R++V+D++RR EV +AA +R L R+++Q L EG + ++ F D C G G Y D + + + ++ +C + + + PS P + +++ V + E D R+ + TL+YYSR + P P AG +N +FP +DP + G + +V ND RH L+ FLQRT+PYFF + + VAFVQ R + DPL N + YD+IN G+DG+G + G ++R++ LK G+ G+ +V + + +GK +GF + E TS++LFR+G+RSVYVNE E L+ + L R+++V H A ++L+ + + T HRL+ ++ Sbjct: 239 EDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDY--------------MSWKL-------YWXXLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLA-GRRIQQILMAEGVTELTQKGFID---WCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITAAAWNAAAQAQKSNKPSVEAMAEMSDAARSEAEAKMLGASAMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRM--ELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALK-GQRPDGK-IVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQ 824
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ31065.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus]) HSP 1 Score: 225.3 bits (573), Expect = 5.800e-55 Identity = 164/573 (28.62%), Postives = 265/573 (46.25%), Query Frame = 0 Query: 155 DPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWP----GRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAA--LFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCK------------------------DDCIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDF-DDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFP-EDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLK--AEYTTRMHRLFVLEE 694 +PQ ++ S + + VVV+NV G Y+ WR ++ + V PE Y E+ L+ IWLGH+ R F +R + TMD++V ID + + V I+LPT GE L+V+ + +L S WP ++ R++V+D++RR EV +L + + + L + RK+ L+ EG ++ +FY+ + GFG+ + + + M+ ++ D+ I + +G E+ T L + P + F + ++YYSR P P AG +N +FP +DP ++G + +V ND RH LQ EFLQRT PYFF D + T +Y + VAFVQ R K DPL N YD+IN+G+DG+G + G ++R++ LK G+ G+T V +D+ +GK +GF E TS++LFR+G+RSVYVNE E L+ + L R+++V H A ++L + + T HR++ ++ Sbjct: 80 NPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQD---------------VPPE-------------YKXXXXXXXXXEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKI---LQAEGVRNLTPLAFYE-WCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGGDLYRLDRNQSFLNQGLDEDISKSKEGDEVEELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFF----DVDAITQQY-KWAKVAFVQTPQRFRKD--LPDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALK-GRSPDGKTGVDPKDL-GLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQ 611
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ28779.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus]) HSP 1 Score: 211.1 bits (536), Expect = 1.100e-50 Identity = 159/546 (29.12%), Postives = 262/546 (47.99%), Query Frame = 0 Query: 155 DPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLC--KDDCIPQEWDGLELPSGTRIEPKLVQTDLAKV-PRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRI-TKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGK--GIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVG--LLKAEYTTRMHRLFVLE 693 +PQ + S + + V+N+ YL WR+ RS+ D WA ++ AE ++ IG+ +GH+SR FP+ R K MD+L +ID E V +++PT GE V+ + + + L +W + R R++V+D++RR EV L +L Y + + ++ VR+ L EG + +S FY+H+ G +FI + I KL DD I + + + + D ++ P ++ ++ + I T+VYYSR P P AG +N +F +P + ++G A +V ND RH L EFLQRT+PYFF D+ K+ ++AF+Q R +++ D DPL N+ +DI+N GRDG GGA++ G ++R+ VL+ G G V + ++ +G+ G+GF E TS+DLFR+G++SVYVN NE L+ + R ++V H A ++ + G +L + T ++F + Sbjct: 1318 EPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGV-DHIIWA----------------------------FIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDID-EAIGALKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVL-DKTVREILMREGVAPISAKGFYEHFANGEHGQRMYDDVNFIRGIEVVSEIDKLIAENDDNISRFSPSVAISRIKERARRASCFDRKEIQPGQKKVWNRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFNPQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFF--TFDKPRRCYKW---ANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFD 1827
BLAST of NO07G01270 vs. NCBI_GenBank
Match: AFZ47304.1 (glycosyl transferase family 2 [Cyanobacterium stanieri PCC 7202]) HSP 1 Score: 67.8 bits (164), Expect = 1.600e-7 Identity = 64/229 (27.95%), Postives = 100/229 (43.67%), Query Frame = 0 Query: 412 PSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAK--FLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQG--KDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNE 637 PS I L Q + ++++ + ++L Y +RP E P AG +N +F GG K F++T D H Q +FLQR +PYFF + T +Y E +AFVQ N DP ++ L Y +I +DG+ A + R + L K+ E ++E+ G G S+ + E + T++ L G++SVY NE Sbjct: 361 PSLQHINQYLEQKREELLDTIKKEELKLSSLLRCSYIARPKPEGKPHHAKAGNINYAIFS---------GGTKGDFILTLDADHIPQPQFLQRVIPYFF----SYSLMTGRYYE-NMIAFVQTPQAF--YNLPSGDPFGHQAHLFYGLIQQSKDGMNSAFYTGTNAVLRREALVMVGLKNFAADFQKDESRLEEFDLVG-GVSSNSITEDMNTAMRLHSAGWKSVYHNE 572 The following BLAST results are available for this feature:
BLAST of NO07G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01270 ID=NO07G01270|Name=NO07G01270|organism=Nannochloropsis oceanica|type=gene|length=4517bpback to top protein sequence of NO07G01270.3 >NO07G01270.3-protein ID=NO07G01270.3-protein|Name=NO07G01270.3|organism=Nannochloropsis oceanica|type=polypeptide|length=705bpback to top protein sequence of NO07G01270.2 >NO07G01270.2-protein ID=NO07G01270.2-protein|Name=NO07G01270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=812bpback to top protein sequence of NO07G01270.1 >NO07G01270.1-protein ID=NO07G01270.1-protein|Name=NO07G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=899bpback to top Synonyms
Publications
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