NO07G01270, NO07G01270 (gene) Nannochloropsis oceanica

Overview
NameNO07G01270
Unique NameNO07G01270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4517
Alignment locationchr7:400786..405302 -

Link to JBrowse

Properties
Property NameValue
DescriptionCellulose synthase (Udp-forming) family gt2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:400786..405302 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G01270 vs. NCBI_GenBank
Match: EWM27236.1 (cellulose synthase (udp-forming) family gt2 [Nannochloropsis gaditana])

HSP 1 Score: 1060.8 bits (2742), Expect = 1.800e-306
Identity = 512/706 (72.52%), Postives = 594/706 (84.14%), Query Frame = 0
Query:    1 MFQDASDDDITLPSPIQEVDETELD-PEDGFGGASNRIEEVVLEDEAEGDRAQVLKLSPEKKNCIPMA-----PSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRSGKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFRSTYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDDCIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM 701
            M +  +D++I + SP+QE DETE+D  E+G+G   +RIEEV+LEDE+E DRA VLKLSP  +N  P+A                                  + +S   ++   TS V+ EMMRVA AGWNEA+ GPTDSP++ED+ES  D+QS+RS+YPDPQ QK LLSGR+NQ++ ++N+ FGLVYLCWRVFRSMNP  DWHDWAPVG YF+DPEDPER WS+KEEFKYNWFCWLLFVAE+  M+ +WLGHASRCFPSKRTKCTMDELV+IDYELS+ TAVC+V+PTRGE LN+LR+VILN MSLN+WPG LDVRKNARLVV+DDRRRAEVLLL ALCYRFAALFCNNRKVR QLK+EGR+ MSLA+FYDHYL CT GFGQTYADSFIDIFSIADMIHK+CKDDCIP EWDGLELPSGTRIEPK  QTDL+KVPRLREDF D+R+ILTLVY+SRPSNEFP SCPVAGMLN LLFPEDPADANILG A+++V NDPRHALQTEFLQRTMPYFFRP+AD EMGTV+Y EC+DVAFVQVALR+ K++KFDTDPLSNR+L+L DIIN+GRDGVGGAMA+ +GCMYRIDVLK GK+ RG++VV EED  + LGKG+GFSTL RCEWLPTSV+LF RGFRSVYVNEI+ETLSL F ET +L GRV+EVF+ HLSA+EVLV+DP+GLLKA YTTRMHRLFV+E+L QGFFM
Sbjct:    1 MVRRNTDNNIAMSSPMQETDETEIDADEEGYG--CSRIEEVMLEDESERDRAGVLKLSP--RNSAPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKSDNAKEKPGTSAVSAEMMRVAFAGWNEADVGPTDSPVEEDIESADDVQSYRSSYPDPQAQKLLLSGRINQLIAILNIGFGLVYLCWRVFRSMNPKHDWHDWAPVGAYFIDPEDPERAWSLKEEFKYNWFCWLLFVAEIFFMVSVWLGHASRCFPSKRTKCTMDELVDIDYELSERTAVCVVIPTRGESLNILREVILNAMSLNLWPGLLDVRKNARLVVVDDRRRAEVLLLIALCYRFAALFCNNRKVRTQLKLEGRAGMSLAAFYDHYLACTAGFGQTYADSFIDIFSIADMIHKMCKDDCIPPEWDGLELPSGTRIEPKQTQTDLSKVPRLREDFADVRSILTLVYFSRPSNEFPASCPVAGMLNSLLFPEDPADANILGMARYMVVNDPRHALQTEFLQRTMPYFFRPVADTEMGTVEYEECQDVAFVQVALRVKKADKFDTDPLSNRDLILQDIINIGRDGVGGAMAKSNGCMYRIDVLKSGKNVRGRSVVSEEDPTQLLGKGLGFSTLTRCEWLPTSVELFHRGFRSVYVNEIDETLSLCFHETPRLTGRVEEVFDIHLSATEVLVRDPLGLLKARYTTRMHRLFVMEDLWQGFFM 702          
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBN77533.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 255.4 bits (651), Expect = 5.300e-64
Identity = 181/580 (31.21%), Postives = 277/580 (47.76%), Query Frame = 0
Query:  153 YPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADS--FIDIFSIADMIHK-LCKDDCIPQEWDGLELPSGTRIEPKLVQTDLAK----------------VPRLREDFDDI----RNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGG-AKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLL-KAEYTTRMHRLFVLEELCQ------GFFMV 702
            YPDP + K   +    ++  V+NV  G  Y+ WR  RSM                     P+ P SV        + WL F  E++L  G+W  H  R FPS R  C+MD+LVEID  +S    VCI++PT GE +  L+ V+L   S  +W  RL      R+ V+D++ R EV  +  L  R A     +    ++  +  R + S      +  +C   F + +     F+D F+  D + + +   +C P            R+E    Q  LA+                +PRL E F  +     NI +++Y +R +   P   P AG +N  +FP  P +  ++G  A+ +V ND RH L+TEFLQRT+PYFF+   D   G  K  E  DV FVQ   R    +  D DPL N  +L + + NV +DGVGG  +   G ++R+D L+ G  A G+ VV      + +G   GF      E   TS++ F++ +RS YV E  ETL++  ++   +  RV++VF  H+ A ++L++D VG L  +   T +H++F L+ L        GFF++
Sbjct:  823 YPDPARIKHHPTSFWIKLSAVLNVVAGAAYIWWRATRSM---------------------PDNPKSVV-------WNWLFFAGEVILTFGVWTSHLQRSFPSVRDVCSMDDLVEIDSNVSNEATVCIMVPTAGEKMKNLKHVLLGAYSQRLWVSRLPTSSQLRIAVLDEKGRREV-SVTTLVARGAMGERKSATSWRRCTVWPRPSSS----PPYSRSCAPSFDEPFITPKIFMDYFNQMDALDQYVFGPECHP------AFDMAVRMENYTGQAKLARASSSSGVPGKKKAAKALPRLEEGFKKLFRSSPNIPSMIYSARANPGTPKVSPKAGNMNAAIFPNSPGEEPVIGDPARVVVVNDARHRLKTEFLQRTVPYFFK--LDRRTG--KKYEWADVGFVQTPQRF--EDLGDGDPLGNHAVLTFFVSNVSKDGVGGVTSCGQGSLWRVDALR-GMAADGKQVVDSVAKPDIVGHDCGFRAEVLIEDTHTSLEFFKQQWRSAYVCEAGETLAVCVEQPNTVAWRVKQVFRWHIGAVQLLLKDGVGFLCTSRMPTPLHKMFGLDSLTYYIQAVGGFFII 1356          
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ31064.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 226.1 bits (575), Expect = 3.400e-55
Identity = 166/615 (26.99%), Postives = 276/615 (44.88%), Query Frame = 0
Query:  138 EDLESPGDIQSFRSTYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFG----QTYADSFI-DIFSIADMIHKLCKDDCIPQEWDGLELPSGTRIEP----------KLVQTDLAKVPRLREDFDDIRN----------------------------------------ILTLVYYSRPSNEFPPSCPVAGMLNGLLFP-EDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADE-EMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLK--AEYTTRMHRLFVLEE 694
            ED +   ++   R    +PQ+++   S  + +V+ V N   G++YL WR   +  PT    D+                W +       ++  L F AE  L I +W+G A R FP +R K TMD++  +D ++  +  VCI+LPT GE L V+ + ++  +S  +W   L   +  R++V+D++RR EV  +AA  +R   L    R+++Q L  EG + ++   F D    C  G G      Y D  + +   +  ++  +C  + +   +     PS     P          +  +++   V  + E  D  R+                                        + TL+YYSR +   P   P AG +N  +FP +DP    + G +  +V ND RH L+  FLQRT+PYFF        + +        VAFVQ   R     +   DPL N  +  YD+IN G+DG+G   +   G ++R++ LK G+   G+ +V +    + +GK +GF +    E   TS++LFR+G+RSVYVNE  E L+    +   L  R+++V   H  A ++L+   +        + T  HRL+  ++
Sbjct:  239 EDDDQDSNLFFDRVYCANPQEKRLFPSAHLVRVLAVANAGLGVLYLHWRYTSTFPPTVGRWDY--------------MSWKL-------YWXXLFFSAEFFLAIAVWVGLAQRLFPVQRIKVTMDDITSVDDQVGYNARVCILLPTAGENLEVVFKALVGALSQRLWDSGLPGSQTLRVIVLDEKRRLEVYRVAAGVHRIGELLA-GRRIQQILMAEGVTELTQKGFID---WCRNGSGYERKHLYDDKKLNEAVQVLRLLDAMCLANGLTDAFALEARPSSATYNPITAAAWNAAAQAQKSNKPSVEAMAEMSDAARSEAEAKMLGASAMNITPGFFEVYGTHLDPDNMETSKEVQKGLPTLIYYSRKNAGTPKISPKAGNMNAAIFPVDDPTMTPLTGESTIVVVNDARHQLEGNFLQRTVPYFFELAGGHPTVASGGRYRWAKVAFVQTPQRFRM--ELSNDPLGNHAISQYDVINHGKDGIGAVSSSGQGSLWRVEALK-GQRPDGK-IVDDPTELDLVGKKLGFRSEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPSSLTWRIKQVLRWHQGAVQLLLFKGIRYTSFGGHFPTMWHRLYAFDQ 824          
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ31065.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 225.3 bits (573), Expect = 5.800e-55
Identity = 164/573 (28.62%), Postives = 265/573 (46.25%), Query Frame = 0
Query:  155 DPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWP----GRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAA--LFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCK------------------------DDCIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDF-DDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFP-EDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVGLLK--AEYTTRMHRLFVLEE 694
            +PQ ++   S  + + VVV+NV  G  Y+ WR  ++ +               V PE             Y          E+ L+  IWLGH+ R F  +R + TMD++V ID  +  +  V I+LPT GE L+V+ + +L   S   WP     ++      R++V+D++RR EV +L +  +  +   L  + RK+   L+ EG   ++  +FY+ +     GFG+ +    + +     M+ ++                          D+ I +  +G E+   T     L    +   P   + F    +    ++YYSR     P   P AG +N  +FP +DP    ++G +  +V ND RH LQ EFLQRT PYFF    D +  T +Y +   VAFVQ   R  K      DPL N     YD+IN+G+DG+G   +   G ++R++ LK G+   G+T V  +D+   +GK +GF      E   TS++LFR+G+RSVYVNE  E L+    +   L  R+++V   H  A ++L    +        + T  HR++  ++
Sbjct:   80 NPQTKESFSSSFLIRGVVVLNVASGFTYMVWRFLKTQD---------------VPPE-------------YKXXXXXXXXXEVFLLFAIWLGHSQRLFAVQRIRTTMDQIVSIDPAVGANAVVAILLPTAGERLDVVLKCLLGASSQRSWPSSSAAKMGRGDGLRVIVLDEKRRKEVYMLTSGVHALSTQILAPSTRKI---LQAEGVRNLTPLAFYE-WCHEKRGFGKVHIFKDVGLSRAVAMVRQMDDLVTGDDGGDLYRLDRNQSFLNQGLDEDISKSKEGDEVEELTHGVSLLADESVHITPGFFQVFRGQAKQAACMIYYSRKDAGTPRISPKAGNMNAAMFPIDDPTSPPLIGPSTIVVVNDARHQLQPEFLQRTTPYFF----DVDAITQQY-KWAKVAFVQTPQRFRKD--LPDDPLGNHAASQYDVINIGKDGIGAVSSSGQGSLWRVEALK-GRSPDGKTGVDPKDL-GLVGKKLGFRAEMLIEDTHTSIELFRQGWRSVYVNEPGEVLAWCTHQPTNLTWRIKQVLRWHQGAVQLLYTKGLRYTSFGGSFPTVFHRMYAFDQ 611          
BLAST of NO07G01270 vs. NCBI_GenBank
Match: CBJ28779.1 (Cellulose synthase (UDP-forming), family GT2 [Ectocarpus siliculosus])

HSP 1 Score: 211.1 bits (536), Expect = 1.100e-50
Identity = 159/546 (29.12%), Postives = 262/546 (47.99%), Query Frame = 0
Query:  155 DPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDWAPVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASRCFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMSLNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQLKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLC--KDDCIPQEWDGLELPSGTRIEPKLVQTDLAKV-PRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRI-TKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVKEYLGK--GIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQKLVGRVQEVFENHLSASEVLVQDPVG--LLKAEYTTRMHRLFVLE 693
            +PQ  +   S    + + V+N+     YL WR+ RS+    D   WA                            ++   AE ++ IG+ +GH+SR FP+ R K  MD+L +ID E      V +++PT GE   V+ + +   + L +W  +   R   R++V+D++RR EV  L +L Y  + +   ++ VR+ L  EG + +S   FY+H+     G       +FI    +   I KL    DD I +    + +        +    D  ++ P  ++ ++  + I T+VYYSR     P   P AG +N  +F  +P +  ++G A  +V ND RH L  EFLQRT+PYFF    D+     K+    ++AF+Q   R   +++  D DPL N+    +DI+N GRDG GGA++   G ++R+ VL+ G    G   V +   ++ +G+  G+GF      E   TS+DLFR+G++SVYVN  NE L+        +  R ++V   H  A ++ +    G  +L   + T   ++F  +
Sbjct: 1318 EPQHTESAPSAWWIRTIGVINLLCMAAYLWWRITRSLKGV-DHIIWA----------------------------FIFLSAECIMAIGMIVGHSSRSFPAHREKVYMDDLTDID-EAIGALKVAVLIPTCGEKTAVMLKALFGNLQLRLWKSKNARRDTLRILVLDEKRREEVHKLVSLVYTLSEVVL-DKTVREILMREGVAPISAKGFYEHFANGEHGQRMYDDVNFIRGIEVVSEIDKLIAENDDNISRFSPSVAISRIKERARRASCFDRKEIQPGQKKVWNRNKYIPTIVYYSRIDAGQPRISPKAGNMNRAIFSFNPQEEPLIGEAAVIVINDVRHELYPEFLQRTVPYFF--TFDKPRRCYKW---ANIAFIQTPQRFHDRTDWNDPDPLGNQAATQFDIVNSGRDGAGGALSCGQGSVWRVQVLRDGIRPDGTKFVKKGMPEDQVGQQGGLGFRAEVLIEDTHTSIDLFRQGWKSVYVNFPNERLACCTLPPDTVKWRWKQVLRWHQGAVQLAMWKGWGYAVLGENWGTTFQKVFAFD 1827          
BLAST of NO07G01270 vs. NCBI_GenBank
Match: AFZ47304.1 (glycosyl transferase family 2 [Cyanobacterium stanieri PCC 7202])

HSP 1 Score: 67.8 bits (164), Expect = 1.600e-7
Identity = 64/229 (27.95%), Postives = 100/229 (43.67%), Query Frame = 0
Query:  412 PSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSRPSNEFPPSCPVAGMLNGLLFPEDPADANILGGAK--FLVTNDPRHALQTEFLQRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNRNLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQG--KDARGQTVVPEEDVKEYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNE 637
            PS   I   L Q     +  ++++   + ++L   Y +RP  E  P    AG +N  +F          GG K  F++T D  H  Q +FLQR +PYFF       + T +Y E   +AFVQ        N    DP  ++  L Y +I   +DG+  A       + R + L     K+        E  ++E+   G G S+ +  E + T++ L   G++SVY NE
Sbjct:  361 PSLQHINQYLEQKREELLDTIKKEELKLSSLLRCSYIARPKPEGKPHHAKAGNINYAIFS---------GGTKGDFILTLDADHIPQPQFLQRVIPYFF----SYSLMTGRYYE-NMIAFVQTPQAF--YNLPSGDPFGHQAHLFYGLIQQSKDGMNSAFYTGTNAVLRREALVMVGLKNFAADFQKDESRLEEFDLVG-GVSSNSITEDMNTAMRLHSAGWKSVYHNE 572          
The following BLAST results are available for this feature:
BLAST of NO07G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 6
Match NameE-valueIdentityDescription
EWM27236.11.800e-30672.52cellulose synthase (udp-forming) family gt2 [Nanno... [more]
CBN77533.15.300e-6431.21Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
CBJ31064.13.400e-5526.99Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
CBJ31065.15.800e-5528.62Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
CBJ28779.11.100e-5029.12Cellulose synthase (UDP-forming), family GT2 [Ecto... [more]
AFZ47304.11.600e-727.95glycosyl transferase family 2 [Cyanobacterium stan... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL097nonsL097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR137ngnoR137Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000738NSK000738Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01270.3NO07G01270.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01270.2NO07G01270.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01270.1NO07G01270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580408gene_2448Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100038g33gene3309Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01270.3NO07G01270.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01270.2NO07G01270.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01270.1NO07G01270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01270 ID=NO07G01270|Name=NO07G01270|organism=Nannochloropsis oceanica|type=gene|length=4517bp
ACAGTGGGCATTATCCAGCAACGATCCATCAGGCCTGCCACAGAGTCTCT
CTTCCAAATTATCTACGGGTACCTCGCTTCGGAATCAAGGAAGGGCGTGT
CTTTTGTGCATCGAGGCTTCTTTCTAGCTTGCCTAATTGACTGGCCTTTG
CGGTCAATTGACACAACCGGTACCATGTTTCAAGATGCTTCGGATGATGA
CATCACATTGCCTAGCCCTATTCAGGAGGTGGATGAGACAGAGCTCGACC
CCGAGGATGGCTTTGGGGGGGCTTCGAATCGCATCGAAGAAGTCGTGTTG
GAGGATGAAGCTGAGGGAGACCGCGCACAGGTGCTAAAACTCTCACCTGA
AAAGAAAAATTGTATTCCTATGGCACCGTCACAACGACTCCGCCCTGTCA
CAGCCGCGGAGGCGGGAGCGAGCGCGCCAACGCTGCCGTCGGGGAGGAGC
ACTAGCCTAGGTTCTTCCAGGAGTGGGAAGGGGGAGAAGGTGACGGCTAC
GTCCAACGTGAACGTGGAGATGATGCGAGTGGCATTGGCAGGTTGGAATG
AGGCGGAGCAAGGACCGACTGACTCTCCCTTGGACGAAGACCTCGAGAGC
CCAGGGGATATACAATCCTTCCGCAGCACCTATCCTGACCCACAAAAGCA
GAAATTCTTGTTGTCGGGACGAGTGAATCAAGTGGTGGTTGTGATGAATG
TATGCTTTGGATTGGTGTATTTATGTTGGCGTGTGTTTCGGAGTATGAAT
CCTACGCGTGATTGGCACGACTGGGCGCCCGTCGGAACGTATTTTGTTGA
TCCTGAGGACCCGGAAAGGCCCTGGAGCGTGAAGGAAGAGTTTAAGTACA
ACTGGTTTTGTTGGCTGCTATTCGTGGCGGAAATGATGTTGATGATTGGC
ATTTGGCTGGGACACGCGAGTCGGTGCTTTCCGTCGAAGAGgtgaggaga
ggagagaatgggaggaaaagagaaggcaggagaggggtcatgatgttgcc
tcttgtgtcttagtttctctgccttgtaatcctttgtgttcgcgcccctt
aattcattatatatatctgtaaaatgtcacagGACCAAGTGCACGATGGA
TGAGCTCGTCGAGATCGATTACGAGCTTTCCAAGCACACGGCTGTCTGCA
TCGTTCTCCCAACCCGAGGAGAGCCTTTGAATGTCCTGCGTCAGGTGATC
CTCAACGTTATGTCACTTAATATGTGGCCTGGTCGGTTGGATGTCCGAAA
AAACGCAAGACTTGTAGTGATGGACGATCGTCGTCGTGCCGAGGTGTTGC
TCTTGGCTGCTCTGTGTTATCGTTTTGCGGCCCTATTCTGCAATAATCGC
AAGgtatgttgtagattggaacatgagggaaatcgccgcagcatctagag
cagatgcatgtgggtgtgttcatcgaaactcttggcaacaaacatatata
tgtacatattgttgttgtttcttgggcgtttactcacaatgttccgcatt
aacccccaaaaacaaatcaatatacagGTGCGGCAGCAGCTCAAGATAGA
AGGGCGCTCTGCCATGAGCCTCGCCTCCTTCTATGATCACTACCTAACAT
GCACAATGGGATTCGGGCAGACCTATGCGGACAGCTTCATCGACATTTTC
TCCATCGCCGACATGATTCACAAGCTTTGCAAgtacgtggtattactatt
tttgtcctctctcacttgttgccttaaattgctcagcaataaattatgta
tgagtacacatcttacctcctcgtcttataataatttattgcagGGACGA
CTGTATCCCCCAAGAATGGGACGGTTTGGAGCTCCCCTCAGGGACCCGTA
TCGAGCCCAAGCTTGTCCAGACGGACCTCGCCAAGGTGCCGCGCTTGCGC
GAGGATTTTGATGACATCCGCAACATCCTCACTTTGGTTTACTACTCCCG
GCCTAGCAACGgtacgtttatacaaccagaaaaaatgacgtggtggcata
aacttagatgtccctcatcttggactttatgagaaatctgggactgattt
atgctacatcagtccaactcactcattcaatctctatgactacccaaaca
cagAATTTCCGCCCTCATGTCCCGTTGCTGGCATGTTGAATGGCCTCCTA
TTTCCCGAAGACCCCGCAGACGCCAACATCTTGGGTGGTGCCAAATTCCT
GGTGACTAACGATCCCCGCCACGCACTGCAGACCGAGTTCTTGCAGCGCA
CTATGCCTTATTTTTTCCGTCCCATAGCTGATGAAGAgtaagatgtttcc
tctgtttatcgttgtcttctagctggtacctttagctcgtgacgttgctg
tatatgcactgttatgctttgtatttctcgcaaataaaaatcctgacgtg
cgtgcccccgccccaatcaaacaatactcatgcacaacagGATGGGCACA
GTCAAGTACATAGAATGCGAGGATGTGGCGTTTGTGCAAGTCGCTCTCCG
TATCACAAAATgtaagtgggaatgccgagcgatacgtggcggcttgcgca
gtctcgcagaaatattttatgtaatggtcacacacgaatacgcatacacg
tacacagCTAACAAATTTGACACGGACCCCCTGTCGAACCGGAACTTACT
CCTGTACGACATCATCAACGTGGGACGGGATGGTGTCGGAGGAGCCATGG
CAAGGCAGCACGGGTGCATGTACCGCATTGACGTCTTAAAGCAAGGCAAG
GATGCCCGTGGACAGACGGTCGTGCCCGAAGAGGATGTGAAAGAGTATTT
AGGCAAAGGTATCGGTTTCTCTACTCTCGCGgtaagtttgagtaaacgca
acaggtatattttgattggttgttttaagcatattcacatcctaatacaa
atatagCGTTGCGAGTGGCTACCAACCTCGGTGGACTTGTTCCGTCGCGG
CTTCCGATCGGTATACGTAAACGAGATCAACGAGACGCTTTCCTTGGGTT
TCGACGAAACTCAAAAGCTCGTCGGCCGTGTGCAGGAAGTTTTTGAGAAT
CACTTGAGTGCTAGCGAAGTGTTGGTTCAGGATCCGGTGGGCCTGCTGAA
AGCTGAGTATACTACGCGCATGCACCGCCTCTTTGTGTTGGAGGAGTTGT
GCCAGGGATTTTTTATGGTATGTTGGGTTTAGTGTGTCTATAAAGATGAT
GTGTCTGTGTGTACGTGCTTTTGTTTGTGTTAGTGTGCAAGCGTGTAAGT
GTGTAAGTGTGTAAGTGTGTGTGTGTGTGTGTTTCCTGTCACTTAAGCTC
TACATGTGACTACATAATCTACGTAAGTGCATGTATGCGCATACGCACCA
GAGCATGTTTATGTGGACGTCTCTCAAAGTGATGAAATCGTATACATCTC
TACTGAGCGCTCATCCATACGCTGATCAAACACACAACTTTCTTCAGGCG
ATTGCGGTGGAGCTTCTCATCTTGTGTGTCGCTCTGTACGCGTACTTGTG
GAAGACACCCTTCTTCACGCACGGGGTCGAGGTGCTTGTCTATTTCCTCC
CGTATTATTTCACTGCTGTCTTACCAACCGGCACCGCCCTCAACTGGAAG
CGCACTTTACCCGATCCGGTAAGTCCCTTGTCCAAGTTTTGGAGGATTTG
TGGTTCCCAAAATGAGACGACGCATTCACTTCAGCACCATTATCAAATGA
AGTGCAAGTACAACCTATCCCCCGATCCTGATCCTGCATTCTCCCCAAAC
ACTAAAATAAGACATTCCGAGGGATTCAGTTGAGCTTTGCCACTGCCTTT
GTGCCCTTTGTGACTTACCTGGGTTCGGCTGCCGCGGAGATGTCCCGGGT
TGTGTGCAGCCGGTCGGGCCGACGGCAATTTAATGTCGAAGGCTGTCCAA
CCTGGCCGCTGTATGCGACACTGGTTTTGATGGTGTCGAGTATGGTGGTG
ACATTCATCAACTGGTGGAGGAGCGGGTTCCAACACGCGGGACTATGGAT
CACGTCCGTGGCTGCGATAATGATATGTGCGGGCATGATCCTACCCAGCG
CCATGCGCGGAATCAAATTTCAAGGGATCCCCAGCTTCTACTTCCGATAT
GCTGCCTTGGTGGTAGTTTTGGTGGTCGTTGCGCTTTGGCAAGGGTCCAG
TATCAAGGAACCACAGTCGAAGCCAAAAGCGATTTAAAGAGGCAAGGAGA
AATATAGTTGATAAAGTCTCTCATCTTCCCTGTCTCTGCTCTCTGGAAAG
AGAAACATGTACAACGTCATTGTGACTTCAAGGTTACATATGATCCAGTC
AAATAAAAACAAGGGCGAGCTAGTTGTGGGATGGGAGGGCTTTTTGCGGA
CTACATAGTGTGTGCGAAGGCATGTGACGACGATGTGTAAGACTTGTGGA
AAAGGAAAAATGGGCATATTGATGGTAAATCGATAGGAATAAAATTGCAA
TACAGTGGATGAAAATGAACCTGGAGCGCTGGCCTTCAAAGGCGCATTTC
ACACTGGGCGGTGCTGT
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protein sequence of NO07G01270.3

>NO07G01270.3-protein ID=NO07G01270.3-protein|Name=NO07G01270.3|organism=Nannochloropsis oceanica|type=polypeptide|length=705bp
MFQDASDDDITLPSPIQEVDETELDPEDGFGGASNRIEEVVLEDEAEGDR
AQVLKLSPEKKNCIPMAPSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRS
GKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFR
STYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDW
APVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASR
CFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMS
LNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQ
LKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDD
CIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSR
PSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFL
QRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNR
NLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVK
EYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQK
LVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM
VCWV*
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protein sequence of NO07G01270.2

>NO07G01270.2-protein ID=NO07G01270.2-protein|Name=NO07G01270.2|organism=Nannochloropsis oceanica|type=polypeptide|length=812bp
MFQDASDDDITLPSPIQEVDETELDPEDGFGGASNRIEEVVLEDEAEGDR
AQVLKLSPEKKNCIPMAPSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRS
GKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFR
STYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDW
APVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASR
CFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMS
LNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQ
LKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDD
CIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSR
PSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFL
QRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNR
NLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVK
EYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQK
LVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM
AIAVELLILCVALYAYLWKTPFFTHGVEVLVYFLPYYFTAVLPTGTALNW
KRTLPDPVSPLSKFWRICGSQNETTHSLQHHYQMKCKYNLSPDPDPAFSP
NTKIRHSEGFS*
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protein sequence of NO07G01270.1

>NO07G01270.1-protein ID=NO07G01270.1-protein|Name=NO07G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=899bp
MFQDASDDDITLPSPIQEVDETELDPEDGFGGASNRIEEVVLEDEAEGDR
AQVLKLSPEKKNCIPMAPSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRS
GKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFR
STYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDW
APVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASR
CFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMS
LNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQ
LKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDD
CIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSR
PSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFL
QRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNR
NLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVK
EYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQK
LVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM
AIAVELLILCVALYAYLWKTPFFTHGVEVLVYFLPYYFTAVLPTGTALNW
KRTLPDPTFRGIQLSFATAFVPFVTYLGSAAAEMSRVVCSRSGRRQFNVE
GCPTWPLYATLVLMVSSMVVTFINWWRSGFQHAGLWITSVAAIMICAGMI
LPSAMRGIKFQGIPSFYFRYAALVVVLVVVALWQGSSIKEPQSKPKAI*
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Synonyms
Publications