jgi.p|Nanoce1779_2|580408, gene_2448 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|580408
Unique Namegene_2448
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:368180..373118 -

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Properties
Property NameValue
TranscriptId580494
ProteinId580408
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:368180..373118 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01270NO07G01270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580408mRNA_2448-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580408mRNA_2448Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|580408

>mRNA_2448-protein ID=mRNA_2448-protein|Name=jgi.p|Nanoce1779_2|580408|organism=Nannochloropsis oceanica|type=polypeptide|length=899bp
MFQDASDDDITLPSPIQEVDETELDPEDGFGGASNRIEEVVLEDEAEGDR
AQVLKLSPEKKNCIPMAPSQRLRPVTAAEAGASAPTLPSGRSTSLGSSRS
GKGEKVTATSNVNVEMMRVALAGWNEAEQGPTDSPLDEDLESPGDIQSFR
STYPDPQKQKFLLSGRVNQVVVVMNVCFGLVYLCWRVFRSMNPTRDWHDW
APVGTYFVDPEDPERPWSVKEEFKYNWFCWLLFVAEMMLMIGIWLGHASR
CFPSKRTKCTMDELVEIDYELSKHTAVCIVLPTRGEPLNVLRQVILNVMS
LNMWPGRLDVRKNARLVVMDDRRRAEVLLLAALCYRFAALFCNNRKVRQQ
LKIEGRSAMSLASFYDHYLTCTMGFGQTYADSFIDIFSIADMIHKLCKDD
CIPQEWDGLELPSGTRIEPKLVQTDLAKVPRLREDFDDIRNILTLVYYSR
PSNEFPPSCPVAGMLNGLLFPEDPADANILGGAKFLVTNDPRHALQTEFL
QRTMPYFFRPIADEEMGTVKYIECEDVAFVQVALRITKSNKFDTDPLSNR
NLLLYDIINVGRDGVGGAMARQHGCMYRIDVLKQGKDARGQTVVPEEDVK
EYLGKGIGFSTLARCEWLPTSVDLFRRGFRSVYVNEINETLSLGFDETQK
LVGRVQEVFENHLSASEVLVQDPVGLLKAEYTTRMHRLFVLEELCQGFFM
AIAVELLILCVALYAYLWKTPFFTHGVEVLVYFLPYYFTAILPTGTALNW
KRTLPDPTFRGIQLSFATAFVPFVTYLGSAAAEMSRVVCSRSGRRQFNVE
GCPTWPLYATLVLMVSSMVVTFINWWRSGFQHAGLWITSVAAIMICAGMI
LPSAMRGIKFQGIPSFYFRYAALVVVLVVVALWQGSSIKEPQSKPKAI*
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Synonyms
Publications