NO07G00960, NO07G00960 (gene) Nannochloropsis oceanica

Overview
NameNO07G00960
Unique NameNO07G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3083
Alignment locationchr7:310757..313839 +

Link to JBrowse

Properties
Property NameValue
DescriptionLmbr1-like conserved region-containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:310757..313839 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006876LMBR1-like_membr_prot
IPR008075Lipcalin_1_rcpt
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G00960 vs. NCBI_GenBank
Match: AFA52586.1 (hypothetical protein [Vaucheria litorea])

HSP 1 Score: 352.1 bits (902), Expect = 3.100e-93
Identity = 199/516 (38.57%), Postives = 307/516 (59.50%), Query Frame = 0
Query:   11 IGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVES-CGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQ-----AACTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNA---SFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAAKNMAS-YNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRR 517
            IG+   +L  IN Y++V W HPDDKNE+Y+ K LV+ GL LAE  +L LPLDVANN  N+ C Q W  + CG ++M L W +++ L+ +    ++PF IF+YE +D L E +GQ         + KY    +    L+L + + F+G+  LPV E   S+  L +  L   +N             +T +     + ++    SF ++++A+L+F+GW  F+ F G+G+  + +DLI  F  RPK +   +++  ++ +Q R  +L+E+G +++ +R        N+L++    R +      FKQMVY+LE+DF +F   K  ++ YNPL PI  L +G+V++++ ++W+LH++LYM   PP + FLN+YF  FD+WFPLFG +SVA+F  YLL   + G FK G+R ++  LHPMKIN TYMNSFLFN+ +ILLC    ++F   AF+ YA  + I     VQ+RYL FF +FY N+VFV  L+   +LS+ Y  + P     K + V++TL R
Sbjct:    2 IGIGFFLLTAINTYIMVLWQHPDDKNESYWAKFLVVMGLTLAEGTLLFLPLDVANNGGNVQCNQFWSSTFCGSIDMHLAWTVLFYLILIFTFFLIPFTIFFYEEDDTL-ELEGQYNFKKTLIISSKYMLALVIMVSLILALTYLFLGKSELPVDEYRLSVGQLLSPELTFTINDPSGRSRPLVGDQITKSLATKSQDTIRLNVSFGLFLLAILAFIGWFLFAAFAGLGIPGISIDLIREFLNRPKRLDRGQISALEMAVQRRCKELVEIGTMLKQKRAQSSQIRSNYLSKQIKSRADNKEFNRFKQMVYVLEEDFDQFVLCKAYSTKYNPLKPIFWLCVGIVSAIIGLLWILHMILYMLIDPPATNFLNEYFNWFDQWFPLFGTVSVAIFSAYLLAAAIKGCFKFGLRIVWFTLHPMKINETYMNSFLFNVGIILLCVPAAIQFCVQAFSSYAVSAEINNILNVQVRYLRFFQFFYANNVFVYALLILTVLSSIYLAVRPSDSSNKAKIVRETLIR 516          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: ETL35650.1 (hypothetical protein L916_12240 [Phytophthora parasitica])

HSP 1 Score: 351.7 bits (901), Expect = 4.000e-93
Identity = 217/522 (41.57%), Postives = 308/522 (59.00%), Query Frame = 0
Query:    1 MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQAACTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPA-SMAD---LYTHPLATPMNATLNVEEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRR 518
            M +  FLL  +      LLI NVY+LV++ H DDKN AYFPKALVIFGL  AE+ VL LPLDVANNS  IGCA+GW   CG +NM L W ++++ + +  VV+LPFAIFYYE +DG    K      AIK     +F +  ++ V +    +  +P+  +   SM+D      +   T +++T+     + A++VT      ++T   S  VY+  L SFVGW  FS+F G+GL ALPMDLI  F  RPK +SA+  A ++L+LQ R  +L+EVG+ ++ +   R   G +   R +  R +  T+  FKQ VYLLE D        +   ++NPL PI  LL+G +AS+++ MW  H+ LYM  + P   FLN YFI FD WFPLFG +SV +F  YLL C V G FK G+R   + LHPMK++GTYMNS +FNL L+LLC  P V+F   AFA Y R + +    GVQ+ YL      +  ++FV  ++   +++    L  PR +   V+D+++ + R+
Sbjct:   48 MALDLFLLAVVXXXXXXLLICNVYILVYFQHDDDKNTAYFPKALVIFGLFFAEATVLLLPLDVANNSTAIGCAEGWNTVCGNINMDLLWLMVFLSIIIFLVVLLPFAIFYYEADDGEDNPKKSQWGEAIKMELGTVFVAAALITVLYLTCAKSSVPMRALEVNSMSDSEGFQPYVDGTTVSSTI----VTVASNVTVQ--HITLTVDVSLPVYVTGLTSFVGWFGFSIFCGIGLIALPMDLILAFFHRPKFISADVYAIQKLILQRRSVELLEVGRSIK-QSMDRPGHGQSSWERKKQRRLDFVTLNKFKQSVYLLEGDVVDLKLCHEEYRNFNPLKPIFKLLLGCIASVISCMWFFHIALYMLPNTPLLPFLNTYFIWFDRWFPLFGTISVGIFSTYLLACAVKGCFKFGMRCFCIALHPMKLHGTYMNSLIFNLGLVLLCAIPSVQFCDQAFADYDRLTALRTLMGVQIHYLKGMRTIWDYNIFVYAILIISLITAAILLAKPRDRASPVDDIRKRIERQ 562          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: OWZ05818.1 (putative membrane protein [Phytophthora megakarya])

HSP 1 Score: 350.9 bits (899), Expect = 6.800e-93
Identity = 214/519 (41.23%), Postives = 305/519 (58.77%), Query Frame = 0
Query:    1 MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQAACTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFR-TSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRR 518
            M +  FLL  + ++ V LLI NVY+LV++ H DDKN AYFPKALVIFGL  AE+ VL LPLDVANNS  IGCA+GW  +CG +NM L W ++++ + +  VV+LPFAIFYYE ++G    K      AIK     +  +  ++ V +    +  +P+  +  +     T         T++   ++  A V N + +   +    S  VY+  L SFVGW  FS+F G+GL ALPMDLI  F  RPK +SA+  A ++LLLQ R  +L+EVG+ ++ +   R   G +   R +  R +  T+  FKQ VYLLE D        +   ++NPL P+  LLMG +AS++++MW  H+ LYM    P   FLN YFI FD WFPLFG +SV +F  YLL C V G FK G+R   + LHPMK++GTYMNS +FNL LILLC  P V+F   AFA Y R + +    GVQ+ YL      +  ++F+  ++   +++ G  L  PR +   V+D+++ + R+
Sbjct:    1 MALDIFLLAVVIIIAVALLICNVYILVYFQHDDDKNTAYFPKALVIFGLFFAEATVLLLPLDVANNSTAIGCAEGWNTACGNINMDLLWLMVFLCIVIFLVVLLPFAIFYYEADEGDDNPKKSQWGEAIKMEIGTIVVAVALITVLYITSAKSSVPMRALEVNSMSASTGFQKYVDGTTVS---STLVATVNNITVQHIVLEVDVSLPVYVTGLTSFVGWFGFSIFCGIGLIALPMDLILAFFHRPKFISADVYAIQKLLLQRRSVELLEVGRSIK-QSMDRPGHGQSSWERKKQRRLDFVTLNKFKQSVYLLEGDVVDLKLCHEEYRNFNPLKPLFKLLMGCIASVISLMWFFHIALYMLPGTPLLPFLNTYFIWFDRWFPLFGTISVGIFSSYLLACAVKGCFKFGMRCFCIALHPMKLHGTYMNSLIFNLGLILLCAIPSVQFCDQAFADYDRLTALRNLMGVQIHYLKGMRTIWNYNIFIYAILIISLITAGVLLAKPRDRASPVDDIRKRIERQ 515          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: XP_008864006.1 (hypothetical protein H310_02320 [Aphanomyces invadans] >ETW07913.1 hypothetical protein H310_02320 [Aphanomyces invadans])

HSP 1 Score: 348.6 bits (893), Expect = 3.400e-92
Identity = 204/534 (38.20%), Postives = 307/534 (57.49%), Query Frame = 0
Query:    3 VSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTES--KGQAACTAIKYTAVCLFASGLVLGVCFFFIGRFRLP----------------VTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRR 518
            ++WFL++         L  N Y+LV++ HPDDKN AY PK LV+ G LLAE+CVL LPLDVANNS  IGC+ GW  +CG L+M   W I+++ + +  VV+LP++I+YYE +DG  +S  +      A+K     +   G+V+ + +       +P                 T+    + D     + +P        E  +A         TSM    S  +Y+ AL+SFVGW  FS+F GVGL ALP+DLI  F  RPK + A+  A +++L+Q R  +L+EVG+ +++   +   A  +   R +  + +  TM  FKQ VYLLE D  +     ++  +YNPL P+  L++G +AS+++ +W+L ++L M    P   FLN YFI FD+WFPLFG +SV +F +YLL   + G FK G+R     LHPM+ NGTYMNSFLFNL LILLC  P+V+FS  AF+ Y R + I    G+Q+RY+  FS F+ ++VF+  ++   +L+T Y  + PR    K + +++ + ++
Sbjct:    2 MNWFLIVXXXXXXXXXLAANFYILVYFQHPDDKNTAYLPKFLVVIGFLLAEACVLLLPLDVANNSTAIGCSAGWNPACGNLDMETLWLIVFMSIAVFLVVLLPYSIYYYESDDGFDDSTKRTHRWLDALKLEIATVIVVGIVIAITYITSSTSDIPYNVIVYNSTVTNDTIQFTDAVGGLHDFLDGDIISP-------NERVYAMSHGLNPLETSMRLAVSVPIYITALVSFVGWFAFSIFVGVGLVALPLDLILAFFFRPKFIPADVYAQQKMLIQIRSLELMEVGKEIKNSMLTHPDAKLSARERRKNNKLDAITMNKFKQAVYLLEKDVAELKLCHEDYKNYNPLVPLGKLVLGFIASIVSFLWLLQIILGMVPPLPILPFLNDYFIWFDQWFPLFGTMSVGIFSMYLLMACIKGCFKFGMRCFCCALHPMEYNGTYMNSFLFNLALILLCCIPVVQFSNQAFSDYVRLTTIQTMMGIQLRYMKGFSVFWVHNVFLYAILAIVLLTTLYLAVRPRDTSSKTDAIRKKIEKQ 528          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: XP_009824354.1 (hypothetical protein H257_02425 [Aphanomyces astaci] >ETV85882.1 hypothetical protein H257_02425 [Aphanomyces astaci])

HSP 1 Score: 344.7 bits (883), Expect = 4.900e-91
Identity = 203/528 (38.45%), Postives = 305/528 (57.77%), Query Frame = 0
Query:    3 VSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQAA---CTAIKYTAVCLFASGLVLGVCFFFIGRFRLP---------VTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRR 518
            ++WFL+             N Y+LV++ HPDDKN AY PK LV+ G LLAE+CVL LPLDVANNS  IGC  GW  +CG L+M   W I+++ + +  VV+LP++I++YE +DG  +S  +       A+K     +   G+++ + +       +P         V      +AD      +    A ++  E  +A        +TSM    S  +Y+ AL+SFVGW  FS+F G+GL ALP+DLI  F  RPK + A+  A +++L+Q R  +L+EVG+ ++S   S      +   R +  + +  TM  FKQ VYLLE D  +     ++  +YNPL P+  L++G VAS+++ +W+L ++L M    P   FLN YFI FD+WFPLFG +SV +F +YLL   + G FK G+R     LHPM+ NGTYMNSFLFNL LILLC  P+V+FS  AF+ Y R + I    G+Q+RY+  FS F+ ++VF+  ++   +L+T Y  + PR    K + +++ + ++
Sbjct:    2 MNWFLVXXXXXXXXXXXXANFYILVYFQHPDDKNTAYMPKVLVVIGFLLAEACVLLLPLDVANNSTAIGCTAGWNAACGNLDMETLWLIVFMSIAVFLVVLLPYSIYFYESDDGFDDSSAKKTHRWLDALKLEIATVVVVGIIVAITYITSSTSDIPYNVLVYNSTVGNDTIHIADAVGGLHSFTDGAIISPNERVYAMAKGLNPLQTSMRLDVSVPIYITALVSFVGWFAFSIFVGIGLVALPLDLILAFFFRPKFIPADVYAQQKMLVQIRSLELMEVGKEIKSSMLSHPDTKLSARERRKNGKLDTITMNKFKQAVYLLEKDVAELKLCHEDYKNYNPLVPLGKLVLGFVASIVSFLWLLQIILGMVPPIPILPFLNDYFIWFDQWFPLFGTMSVGIFSMYLLMACIKGCFKFGMRCFCCALHPMEYNGTYMNSFLFNLALILLCCIPVVQFSNQAFSDYVRLTTIQTMMGIQLRYMKGFSAFWVHNVFLYAILVIVLLTTLYLAVRPRDTSSKTDAIRKKIEKQ 529          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: GAX96522.1 (Hypothetical protein PINS_004391 [Pythium insidiosum])

HSP 1 Score: 344.0 bits (881), Expect = 8.300e-91
Identity = 214/532 (40.23%), Postives = 312/532 (58.65%), Query Frame = 0
Query:    1 MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTE---SKGQAA----CTAIKYTAVCLFASGLVLGVCFFFIGRFRLPV--TEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYF-----LMTPRQKVIKVEDVKQTLRRR 518
            M   WFL+  + +M V+LLI NVY+LV++ H DD N AYFPK LVIFGL  AE+ VL LPLDVANNS  +GC +GW ++CG L+M L W I+++ V +  +V++PF+IFYYE +DG  E     G+A       AIK     L  +  ++ V F  + +  +P+    + ++      H       ATL++ E + A  +   + R  +T + S  +Y   L+SFVGW  F++F G+GL ALP+DL+  F  RPK +SA+  AH++L LQ R  +L+E+G+ +++  +       +   R +  + +  T+  FKQ VYLLE D  +     +   +YNPL  +  L+ G +A LL+ +WVLH+ LYM    P   FLN YF+ FD+WFPLFG +SV +F  YLL C V G FK G+R     LHPMK++GTYMNS LFNL L+L C  P V+F   AF  Y R + I    GVQ+RYL   SY +  ++FV  ++ F +L+T Y      +  PR     V+D+++ + R+
Sbjct:    1 MSPDWFLIGLVIVMSVVLLIANVYILVYFQHDDDNNTAYFPKFLVIFGLFFAEATVLLLPLDVANNSTAVGCKEGWNKTCGHLDMDLLWLIVFMCVIVFILVLVPFSIFYYEADDGGEEELAGSGRANNHQWLEAIKLEIGTLLVAVSLIVVLFVTVSKSHIPMKAVTVVSTSPTFGFHDYVD--GATLSMAELANADKL--VAERIRVTLEVSLPIYTTGLVSFVGWFAFTIFCGIGLVALPLDLVLAFFYRPKFISADVYAHQKLALQRRSQELLELGRNIKASMERPGAKAASSWERRKQXKLDFVTLNKFKQSVYLLEQDMEELKLCHEEYRNYNPLIAVFKLVAGGIAGLLSTIWVLHIALYMLPPVPLVPFLNTYFMWFDQWFPLFGTISVGVFSWYLLMCAVKGCFKFGMRCFCFALHPMKLHGTYMNSMLFNLGLVLACCIPAVQFCDEAFRDYGRLTAIRTMMGVQIRYLQGMSYLWEYNIFVYGILLFALLTTIYLARCYCIAKPRDNASPVDDLRKKIERQ 528          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: XP_002184914.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43650.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 340.9 bits (873), Expect = 7.100e-90
Identity = 208/508 (40.94%), Postives = 301/508 (59.25%), Query Frame = 0
Query:   25 MLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGL------------TESK-GQAACTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEI--PASMADLYTHPLATPMNATLNV-------------EEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAG--GNFLT------RTRAERNERSTMKSFKQMVYLLEDDFGKF-SAAKNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGY 496
            +LVH+ HPDD N+AY PK +V+ G +LA + VL LPLDVANN    G   G    CGGLNM L W I++ ++ +   V++PFA FYYE +DG+             +S+ GQA C    Y        G++  V +  +   ++PV E   PA          +   NAT ++              + ++ ++V +   +T +  Q S   +   L++++GW  F++FGG+GLAALP+DL   F  RP+ M A E A  QL L+ RV +++++G+L++ ER+ +  AG    F T        +A R+E   +  FKQ VYLLE D   F +A  N   YN L P   LL+ + A +++I W +HV++Y+F SPP + FLN YF  FD+WFPLFGVLSVALFV YLL   + G FK G+RFLF  +HPMK+  TYM+SF+FN+ L+LLC  P V+FS +AFA YA F+ I Q FGVQ+++L FFS+F+TN+VF+   + F +L++ Y
Sbjct:   24 LLVHYQHPDDHNDAYVPKLIVLLGFVLAGATVLMLPLDVANNEGYAGYDTG---LCGGLNMELMWDIVFWMIPIWVFVLIPFATFYYEADDGMLMAGTAYAPNPVRQSRIGQAIC----YQLFVFVIIGVIFAVTYISLSDSKIPVQEYVGPALGKVNQGFTYSAQRNATDDLLPFDSDGLQPWGDSDTTYLSNVVDNGEQT-LVLQVSLSTFYAGLMAWLGWFLFAIFGGIGLAALPLDLYLMFKNRPRHMDAAEFAEAQLSLRERVNEMVDIGELIKIEREQKAQAGLTSAFATFSLNSDTRKAARDENQAVLGFKQAVYLLEQDVEDFQNATVNYKKYNVLIPYIALLLSLCAFIVSIFWFIHVIVYVFPSPPLAPFLNNYFEWFDKWFPLFGVLSVALFVSYLLLAALKGCFKFGIRFLFFHIHPMKVGKTYMSSFMFNIALVLLCALPAVQFSQAAFADYAAFAEIRQIFGVQIQFLQFFSFFWTNNVFIYCFLAFTVLTSIY 523          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: XP_012213328.1 (hypothetical protein SPRG_18504, partial [Saprolegnia parasitica CBS 223.65] >KDO15964.1 hypothetical protein SPRG_18504, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 338.6 bits (867), Expect = 3.500e-89
Identity = 201/484 (41.53%), Postives = 285/484 (58.88%), Query Frame = 0
Query:    1 MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQAA-CTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPASMADLYTHPL-----ATPMNATLNVEEASFA-------------------ADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNI 459
            M ++WFL++ + LM  + L  NVY+LV++ HPDDKN AYFPK LVI GLLLAE+C+L LPLDVANNS  IGC  GW  +CG L+M + W I+++ + +  V++LPFAI+YYE +DG  ++K  +    A+K     L    +V+ + +       +P   I  S     + P+     ++  NAT+ V  A  A                   A +T+    T+MT   S  +Y+ AL SFVGW  F++F  +GL ALP+DLI  F  RP+ M A+  A +++L+Q R  +L+EVG+ +++++ +   +  +   R +  R +   M  FKQ VYLLE D  +     ++  +YNPL P   L++G + S+++ +WVL ++L M    P   FLN YFI FD WFPLFG +SV LF LYLL C V G FK G+R     LHPM+ NGTYMNSFLFNL LILLC  P V+F+  AF  Y R + I
Sbjct:    1 MALNWFLIVVVVLMSFVFLAANVYILVYFQHPDDKNTAYFPKLLVIVGLLLAEACILLLPLDVANNSTAIGCDAGWNSTCGNLDMEVLWLIVFMAIVVFLVLLLPFAIYYYEADDGFDDAKAASRWLDALKMEVGTLIVVAIVVAITYTTSSTSTIPYEAIVMSSMPNGSIPITASNGSSVTNATIVVPSALAAYAGFHEFTDGSVISSDERLAALTHPVQATNMTVAVSVPIYITALFSFVGWFAFTIFVAIGLIALPLDLILAFFYRPRFMPADIYAQQKMLIQIRSLELLEVGKEIKAQQLTVTGSKLSLRERQKQARQDLLMMNKFKQAVYLLEKDVQELKLCHEDYKNYNPLVPFGKLVLGFLCSIVSFLWVLQIILAMLPRVPIVPFLNNYFIWFDSWFPLFGTISVGLFTLYLLACCVKGCFKFGMRCFCCALHPMEFNGTYMNSFLFNLTLILLCCIPCVQFANQAFGDYVRLTTI 484          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: CCI42339.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 334.0 bits (855), Expect = 8.600e-88
Identity = 192/519 (36.99%), Postives = 301/519 (58.00%), Query Frame = 0
Query:    1 MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESKGQAA-CTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFRTSMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERSTMKSFKQMVYLLEDDFGKFSAA-KNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRR 518
            M   W+L++        LL  N+Y+LV++ H DDKN AYFPK LV+FGLLL E+ +L LPLDVANN+  +GC +GW + CG L+M L W I+++ +  +    LPF+I+YYE +DG     G      A K   + L  +  +L + +    + ++P+         + +   +    +TL   E + A  +T       +T   SF +Y + L SF+GW  FS+F G+GL ALPMDLI  F  RPK +SA+  AH++L +Q R  +LI++G+ +++  +       +   R +  R +  T+  FKQ VYLLE D        +   ++NPL P+  L +G + S+++++W+ H+ LYM  + P   FLN YFI FD WFPLFG +S+ +F L+LL C V G FK G+R     LHPM+++GTYMNS LFNL LIL+C+ P V+F   AF  Y R + I   FGVQ++ L   + F+  ++F+  ++  C+LS  +  + P+ K   ++++++ + ++
Sbjct:    1 MAADWYLIVXXXXXXXXLLFCNLYILVYFQHADDKNTAYFPKLLVVFGLLLGEATILLLPLDVANNTTALGCQEGWNKECGNLDMELLWLIVFLSIIFIXXXXLPFSIYYYESDDGDDSITGSCRFLEAFKMECLTLLFTIALLVILYVTSSKSKIPMKATQVFSESIKSGFHSYIDGSTLTNAETANATSITKV---LHVTVNVSFPLYTIGLASFLGWFGFSIFTGIGLVALPMDLILAFVNRPKYISADVYAHQKLAIQRRSLELIDIGKQIKTGMERPGQHNKSSKERRKQRRVDFITINKFKQAVYLLETDMEDLQLCHEGYKNFNPLIPLFKLFLGCICSIVSLIWICHIALYMLPATPLLPFLNDYFIWFDSWFPLFGTISIGIFSLFLLACSVKGCFKFGMRCFCFALHPMELHGTYMNSLLFNLALILMCSIPAVQFCDQAFKEYGRLTAIRTIFGVQIQNLRGMNVFWIYNIFIYAILCICLLSGIFLGIKPKDKASALDNIRKKIEQQ 516          
BLAST of NO07G00960 vs. NCBI_GenBank
Match: GAX12705.1 (LMBR1 domain-containing protein 1 [Fistulifera solaris])

HSP 1 Score: 331.3 bits (848), Expect = 5.600e-87
Identity = 210/554 (37.91%), Postives = 304/554 (54.87%), Query Frame = 0
Query:    6 FLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLLLAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLCVVVLPFAIFYYEGNDGLTESK-------------GQAACTAIKYTAVCLFASGLVLGVCFFFIGRFRLPVTEIPA-----------SMADLYTHPLATPMNATLNVEEASFAADVTNASFRT-------SMTFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSAEELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAG--GNFLT------RTRAERNERSTMKSFKQMVYLLEDDFGKFSA-AKNMASYNPLWPIAMLLMGVVASLLTIMWVLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVAGNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFAGYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTPRQKVIKVEDVKQTLRRRRK 520
            FL++ I +  VILLI + Y +V++ HPDD NEAY PKA+VI G  L+ + VL LPLD AN     GCA    + CGGLN+   W  M++L+ +   + +PF  FYYE +DG+  +              GQAAC    Y    L   G+     +   G   +P+ +              +  + YT       N T  V +      +     +T        +T + S   +   L+++VGW  F++FGG+GL ALP DLI  +T RP+ +   E A  Q+ L+ RV +L++VG++++ ER+ +  AG  G F T      + +A R+ER  +  FKQ VYLLE D   F A   +   YNPL P   L++G  + ++++ W LH+++Y+F SPP + FLN +F  FD WFPLFGVLSVALF  YLL C V G FK G+RF F  +HPM    TYM+SF+FN  L+LLC+ P+V+F   AFA YA F++I Q FGVQ + L FFS+F+  +VFV I     I++  Y    P+ +    + ++  LR R +
Sbjct:    4 FLVISIIVAFVILLIGSAYFIVYYQHPDDSNEAYLPKAIVILGFALSGATVLMLPLDTANKDGYAGCAGYDDKFCGGLNVEGMWNTMFILIPIWVFIFIPFMTFYYEADDGMLMAGTAYAPNPVKKSRIGQAAC----YELFVLAIVGVFFAGSYAAFGETNIPIQDYEGLGTLKGGIGIITETNSYTFEYNPNQNKTFRVHDLINMNPLDEEWLKTVVDNGAAELTLEVSAATFFGNLMAWVGWFLFALFGGIGLMALPFDLILAYTNRPRHLDPVEYAEIQINLRERVNELVDVGEMIKVEREEKAQAGLAGAFSTFSFDAEKRKAARDERQAVLGFKQAVYLLEQDVDAFKAVTTDQDKYNPLMPYLYLMLGCFSVIISLFWFLHIIVYVFPSPPLAPFLNNFFKSFDSWFPLFGVLSVALFTSYLLLCAVKGCFKFGLRFFFFHIHPMIPGKTYMSSFMFNTALVLLCSLPVVQFCQDAFADYAAFTDIRQIFGVQAQNLKFFSFFWQKNVFVYIFFCLNIMTLVYLGCKPKDQAASGQALRDQLRSRAR 553          
The following BLAST results are available for this feature:
BLAST of NO07G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
AFA52586.13.100e-9338.57hypothetical protein [Vaucheria litorea][more]
ETL35650.14.000e-9341.57hypothetical protein L916_12240 [Phytophthora para... [more]
OWZ05818.16.800e-9341.23putative membrane protein [Phytophthora megakarya][more]
XP_008864006.13.400e-9238.20hypothetical protein H310_02320 [Aphanomyces invad... [more]
XP_009824354.14.900e-9138.45hypothetical protein H257_02425 [Aphanomyces astac... [more]
GAX96522.18.300e-9140.23Hypothetical protein PINS_004391 [Pythium insidios... [more]
XP_002184914.17.100e-9040.94predicted protein, partial [Phaeodactylum tricornu... [more]
XP_012213328.13.500e-8941.53hypothetical protein SPRG_18504, partial [Saproleg... [more]
CCI42339.18.600e-8836.99unnamed protein product [Albugo candida][more]
GAX12705.15.600e-8737.91LMBR1 domain-containing protein 1 [Fistulifera sol... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000784NSK000784Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00960.1NO07G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580275gene_2413Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100080g15gene3271Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00960.1NO07G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00960 ID=NO07G00960|Name=NO07G00960|organism=Nannochloropsis oceanica|type=gene|length=3083bp
GAACAGGACGACGATGGGCCAGACAAGCATGTTAATTCATGTCCTCCCGA
CTTTCGTTGGCTATTCCACTACGCAAACCCACACATCCGCACAGGGAATG
CTCACCATCATGTATCGAACATTTCTCTTGAGTTTGTCTATTCCGTGGGC
ATTGATCATGCTGAGAGTCGTGATCCAAGTCGTCCGACAATTTGACTTGC
CCGCCCGTAAGCGCGTCCTTTTTAAGCCCAAACGACACCTGCACCTCTCA
CCCTGCTGCACTGAACCACAGCGTTCGACACCAAACCACAGGTAACACTC
TAGAGCCTGCGCCTAAATCCTTCGGTCTCCCTTCCTGGCCCTTGGTTCCA
CTCTGTGCCCTCGTTAGCAGCATGGGTGTGTCCTGGTTTTTGCTGCTATG
CATCGGCTTGATGATTGTCATCTTGCTCATAATCAACGTGTACATGCTCG
TGCACTGGTCACATCCAGACGACAAGAATGAGGCATACTTTCCCAAGGCC
CTGGTGgtacgtagatcgatggaaagggtttgacgggaaggcccatgtca
tgccgtgtgtgtcgagtacaaatgctggactgccgcgctctccacttccc
gccagccggatgcattcgtccggatgattttgttcattctacgtcgtgat
gagtcctgtgctcattttccacctctacatgcttgtacattgcgccattc
tctagctgtagtgctcccattttccatccgtcgccgacaaccatccctcc
cgccctcatctcttccctcctcaactcctcaccaaagATTTTCGGCCTTC
TGCTCGCCGAATCCTGCGTTCTAGCTCTACCCCTCGATGTAGCTAATAAC
AGCATTAACATTGGGTGTGCCCAGGGATGGGTGGAAAGCTGCGGTGGCCT
CAACATGGGCCTGTTTTGGAAAATTATGTATGTCCTTGTCACCTTGCTGT
GCGTGGTTGTTCTGCCGTTTGCCATCTTTTACTATGAGgtatgcgttttt
tgaagagagagaggaagagagagagtgtgcgtgtgtgtagggaaaggaga
gagggacggaggtagggagagcggtggtggacatgtcgcctttcgtgggc
tttcattggtttccccccttcgagcagaagacgatgtgcgtctcctttcc
ccccctcttcttccatgtttgtccgacatagaaatcaaagtaaattcact
ttttaaaatacattcaatcaccttatcccttcagGGCAACGACGGTCTGA
CGGAGAGCAAAGGCCAGGCAGCCTGCACAGCGATCAAGTACACCGCTGTC
TGTCTCTTCGCCTCGGGGCTTGTCCTGGGTGTATGCTTCTTCTTCgtacg
taccttccactgtatagcttttttttcgcaaacgacattctatcctgccc
tcttgctctcgcatacgcactctctgcccatgatcttaaaaagtagcctc
gtagctcatcccccctcccttcctccctccctcccttccttccttcctcc
ttccagATCGGACGCTTCCGCCTCCCTGTAACGGAAATCCCCGCCAGTAT
GGCCGACCTCTATACCCACCCTCTCGCTACGCCCATGAATGCAACCCTGA
ATGTGGAAGAAGCCAGCTTTGCAGCTGATGTGACCAACGCGAGTTTTAGG
ACCTCGATGACCTTCCAATCATCCTTTGTTGTCTATATGGTTGCCCTCCT
CTCCTTCGTGGGTTGGATCTTCTTTTCTGTTTTCGGAGGGGTGGGCCTGG
CGGCGTTGCCCATGGACCTAATCACGACATTTACGGCTCGGCCGAAGGCA
ATGTCAGCGGAAGAACTGGCCCATGAGCAACTGTTGTTGCAGACACGGGT
GGCGGATCTGATCGAGgtgaagacggggggagggagagagggagggaggg
attgagaggagggacgaggaaggtttacatggtgctcggaaaatactgac
acaatttgagggtgcttttcatgtgccctgctaacagtctccctcgtcct
cgtctcgccttccattctctcacacacgcaaacacgtagactcaactcac
ccataccatcccttttcccctccctccctccttccctccctcagGTCGGC
CAACTCGTCCAATCCGAACGAAAAAGCCGTCGCACAGCAGGCGGAAACTT
TTTAACGCGCACCCGTGCAGAGCGCAACGAGCGCAGCACGATGAAGAGCT
TCAAACAGATGGTGTATTTACTCGAGGACGACTTCGGAAAATTCAGCGCC
GCGAAAAATATGGCGAGCTACAACCCCTTGTGGCCGATTGCAATGCTCCT
GATGGGAGTTGTGGCGTCACTCTTGACGATCATGTGGGTGCTCCATGTGG
TGCTCTACATGTTCTTTTCCCCGCCGCAGTCCCAATTTTTGAACCAGTAC
TTCATTCAGTTCGATGAGTGGTTCCCGCTGTTTGGGGTGCTGTCCGTGGC
GCTCTTCGTCCTCTACCTCCTCTTTTGTGTCGTGGCAGGGAACTTTAAGA
TTGGAGTGCGGTTCCTGTTTGTGGAGTTGCACCCAATGAAGATCAATGGC
ACGTACATGAACTCATTCCTCTTCAACCTCATTCTGATCCTGTTGTGTAC
CTTTCCGATTGTCGAGTTTTCCACTTCAGCGTTTGCAGGCTACGCGCGCT
TCAGTAACATCTATCAATTTTTTGGGGTGCAAATGAGGTACTTGATCTTC
TTCTCCTATTTCTACACCAACCATGTCTTTGTGGGCATCCTCGTAGGATT
TTGCATCTTGTCCACGGGTTATTTTTTAATGACCCCGCGACAGAAAGTGA
TTAAGGTGGAAGACGTCAAGCAGACGTTGCGGCGGAGACGCAAGATTTCC
AAATAAGTAGAACTAAAAATTATAAATGATGATTTGGGATGTATTCCTTC
ATGTATATGTGTGCGGATTTTTGATGTGGTGGGTTGGTGAGGGAACGAAA
AGAGAGACCGTGATGGTGCCTTGATGTTTGCCTGCGAAACCCGCGGCCAT
CCACGCAAAGCTTTGAGTTAAAAGAAGCAAGAAGACGAGAAATTGAAAGG
ACACGACTCGAAAAGTAGATGGAAACTAAATGC
back to top

protein sequence of NO07G00960.1

>NO07G00960.1-protein ID=NO07G00960.1-protein|Name=NO07G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=523bp
MGVSWFLLLCIGLMIVILLIINVYMLVHWSHPDDKNEAYFPKALVIFGLL
LAESCVLALPLDVANNSINIGCAQGWVESCGGLNMGLFWKIMYVLVTLLC
VVVLPFAIFYYEGNDGLTESKGQAACTAIKYTAVCLFASGLVLGVCFFFI
GRFRLPVTEIPASMADLYTHPLATPMNATLNVEEASFAADVTNASFRTSM
TFQSSFVVYMVALLSFVGWIFFSVFGGVGLAALPMDLITTFTARPKAMSA
EELAHEQLLLQTRVADLIEVGQLVQSERKSRRTAGGNFLTRTRAERNERS
TMKSFKQMVYLLEDDFGKFSAAKNMASYNPLWPIAMLLMGVVASLLTIMW
VLHVVLYMFFSPPQSQFLNQYFIQFDEWFPLFGVLSVALFVLYLLFCVVA
GNFKIGVRFLFVELHPMKINGTYMNSFLFNLILILLCTFPIVEFSTSAFA
GYARFSNIYQFFGVQMRYLIFFSYFYTNHVFVGILVGFCILSTGYFLMTP
RQKVIKVEDVKQTLRRRRKISK*
back to top
Synonyms
Publications