NO07G00910, NO07G00910 (gene) Nannochloropsis oceanica

Overview
NameNO07G00910
Unique NameNO07G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2380
Alignment locationchr7:294879..297258 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:294879..297258 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO07G00910 vs. NCBI_GenBank
Match: EWM27285.1 (hypothetical protein Naga_100080g8 [Nannochloropsis gaditana])

HSP 1 Score: 283.9 bits (725), Expect = 1.200e-72
Identity = 220/535 (41.12%), Postives = 280/535 (52.34%), Query Frame = 0 
Query:   51 MARGRKKGKHSWDGYSKKDQASKWLRTLAEAHYQLRRSGSTS--AAVTAAGTNKASNVISKNANGGWLQQFRLRHQRGGINGSGSGAVVARVNSQAAARFVESYLRGPPSAAAANLTAPVAARSRKKDGVGCRREGDEDGGDISLEDWLSWEMRRGVKFDEAEEMGDTGKEGGKDQEASPIVSLTELCCRQVGADLPLYGAACALDKEVGEAQVRREHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADAIQGIFSLLPSRCLARISLAASLSHAITDASLPLLCQPSALYLVLVGSFTDSGLARAMFPRLRQLSPTASWEDATQEPQLGGCAILQSLLVSSPGLTPLCVEGIGRHLTTVRHLAVPRCFNADVTMTAKEVLSTVGASCGYVQELDLRGCHWLTEKSLIGWVSVGGKAATATAGIVGLGGMDGLEKEEGE-GMGVVVGGRXXXXXXXXXXXXXXMEFDGPTPDRGPPVALRRLYLDKRLAKAEAVRSTFAEVG 583
            MA  RKKGK S DGYSKKDQA KWL+ LAEAHYQLRRSG+T+                                        S SG+   R+N   AARF+ESYLR P +AA+A     V  R+ +++G   R+       D  L +W  W+     +  E+ E G    +   D++ + +V+LTELCCRQ+GADL LYGAA A   +   AQ+                                 XXXXXXXXXXXXXXXXXX               A +I+ +FSLLP  CLA ISLAASL+ A+TDA+LPLLCQPSAL L LVG +TD GL +A+ PRL       SWE A  EP+L GC  L+SL + SP LTP C+  +G  L+TV+ L + RCFNADVTMTAKEVL+ +GAS  Y++EL L GC WL+EK+++ W     K   A     G GG + +++E     MG  +G                +  +       PP ALRRL +D RLA    VR  +   G
Sbjct:    1 MAGSRKKGKQSRDGYSKKDQAHKWLQMLAEAHYQLRRSGNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSGSGGPRLNPLEAARFIESYLREPSTAASAAWVYKVTGRTGRREGAETRKATGGTRRDRGLCEW--WQ-----RVGESSESGSLCADRRVDEKPNGVVTLTELCCRQIGADLALYGAATAAGSDPMTAQM----ADLAIHSEDKQKTESSLVASTRTVSDGSAXXXXXXXXXXXXXXXXXXLTYRGGLEGISETSVAASIRTMFSLLPPMCLAHISLAASLAQAVTDAALPLLCQPSALCLALVGDYTDEGLIKALSPRLGNAFAQFSWECARVEPRLEGCVALESLYLRSPCLTPSCLGEVGGRLSTVKSLTLSRCFNADVTMTAKEVLAHIGASWHYLEELSLEGCRWLSEKAVLKWAGGKEKVMNARGREGGEGGKEWVDEEAAVWQMGKRLG----------RDIPSVLGLEASLSPCAPPAALRRLRVDVRLANRALVRQAWESRG 514
The following BLAST results are available for this feature:
BLAST of NO07G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27285.11.200e-7241.12hypothetical protein Naga_100080g8 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000791NSK000791Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00910.1NO07G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|661567gene_2407Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100080g8gene3265Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00910.1NO07G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00910 ID=NO07G00910|Name=NO07G00910|organism=Nannochloropsis oceanica|type=gene|length=2380bp
CGGTCGCGTCGAAGGAAAAAGTTCGAGCAGAAATTGAGAAACACCACCCC
ATACCACACGCCGCAGTGCTGAAGACCATCACAAGCACACTTTGTAGCTT
ACCGCGTCCCCACGGCTTTACTCGCACAGCGTTACAGCACGGCTGTCATA
AATCCCTTGGGCTACCCTGCATCGTGGGCGGCTGTGTGTTTCAATCTTCC
GCTGACCTGGCAGATCTCCCGCCACACACCCTGCATCGCTTCACACATGC
ATACCCTCACTGGTAGCCGTGCTGCGCTTAAATGATCAAGCGTGGCCAAT
TATGTCAGATGTGTTTGAGAGTCTATGATATGCCAATCATGGCCGTGCCC
TTTGCTTGACGGCTTTCTGCACATCAGATCGCCTCTTAGTCCATCCATCC
TTGTCGAGCTCTGAAAGGTTGCATTACGTAGATGCACACACATAGCCCCC
TTCCTGATACCCACTCCACAAGGCTCAATCTGTGCACACGACTCCTCCTC
GCTGCATTTGATGCTGGGCATATCTTTTGTATGCCGTTCTTATGCTACCG
CGTGACCCAATGCCCCTAAATCAACTCGTACTGATTTCCCTCGACCCCCC
GCCCCCACCCACACCACTTCTACAGCAGGGCTTCTCGCAACCTCTTCACA
TTTCCCTCCGCATCGCCTCTACACCATCCGTGCACAAAGTCATGGCACGC
GGCCGCAAAAAGGGCAAGCACTCCTGGGATGGCTACTCCAAGAAAGACCA
GGCCAGCAAATGGCTCAGAACCCTTGCCGAGGCACATTATCAATTACGTC
GCTCAGGCAGCACCAGCGCTGCAGTCACCGCAGCCGGCACCAACAAGGCC
AGTAATGTCATTAGCAAAAACGCGAATGGCGGGTGGTTGCAGCAGTTCCG
TCTGCGCCACCAACGAGGAGGAATCAACGGCAGCGGGTCCGGGGCAGTGG
TGGCACGGGTGAATTCTCAAGCTGCTGCACGCTTTGTTGAGTCTTACTTG
AGAGGTCCGCCCTCTGCGGCGGCAGCAAATTTGACGGCTCCGGTAGCAGC
ACGAAGTAGAAAGAAGGATGGTGTAGGGTGTAGGAGGGAGGGGGATGAGG
ATGGGGGGGATATTTCTCTGGAGGATTGGTTGTCCTGGGAAATGAGGAGA
GGTGTTAAATTTGATGAGGCGGAGGAAATGGGGGATACAGGAAAGGAAGG
GGGAAAGGACCAGGAGGCTTCGCCCATCGTGAGCCTTACCGAGCTATGTT
GCCGTCAGGTGGGTGCGGATCTGCCTCTCTACGGTGCTGCGTGTGCTTTG
GATAAGGAGGTGGGAGAGGCTCAAGTGAGGAGAGAACATGAAGCGGTAGC
AGCAGGAGCGCCGGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAG
GAAGTGGAGGGGGAAGAAAGGGGAGAAGAAGAAGAAGAGGGAGGAAGTGA
CGATGACAGCGGCGAGAGCACTACAGCTGACGCCATTCAAGGAATCTTCA
GCCTTCTCCCCTCCCGGTGCTTGGCGCGTATTTCCCTCGCAGCGTCTCTT
TCCCACGCCATCACGGATGCTTCCCTCCCCTTGCTCTGCCAACCCTCCGC
CCTCTACCTTGTCCTCGTCGGGAGTTTCACGGACTCTGGGCTTGCTCGAG
CCATGTTTCCGCGGCTTCGACAGCTTTCCCCCACTGCCTCTTGGGAGGAC
GCGACGCAGGAACCCCAACTCGGTGGATGTGCCATTCTTCAATCCCTCCT
TGTGAGCAGTCCTGGGTTGACCCCTCTGTGCGTGGAAGGGATCGGGAGGC
ATTTGACCACGGTGCGGCACTTGGCCGTTCCCCGGTGTTTTAATGCGGAC
GTCACCATGACAGCAAAGGAGGTGTTGTCGACCGTAGGAGCGTCCTGTGG
GTACGTGCAAGAACTTGACCTCCGGGGCTGCCACTGGCTCACGGAAAAGA
GTCTGATCGGCTGGGTGAGTGTTGGAGGGAAGGCGGCGACTGCGACTGCT
GGGATTGTGGGCTTGGGAGGAATGGATGGATTGGAGAAGGAAGAGGGCGA
GGGGATGGGGGTGGTGGTGGGTGGGAGGGAGGGAAGGAGGGAGGGAAGGA
GCAGGGGGATGGCAAGGATGATGGAGTTCGATGGACCGACGCCTGATAGA
GGCCCGCCTGTAGCTTTGCGTCGACTTTACCTGGATAAGCGGCTGGCCAA
AGCGGAGGCGGTGCGAAGTACGTTTGCGGAGGTGGGCGGTGATTGTGAGA
GTAGGAGTGGGGGCAAAGAGACCAAGGGCGTGGTTAAGGTGTGTGTTTGG
GAGGCGAAGGGGAAGAGGGCATTAGACTGA
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protein sequence of NO07G00910.1

>NO07G00910.1-protein ID=NO07G00910.1-protein|Name=NO07G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=613bp
MLPRDPMPLNQLVLISLDPPPPPTPLLQQGFSQPLHISLRIASTPSVHKV
MARGRKKGKHSWDGYSKKDQASKWLRTLAEAHYQLRRSGSTSAAVTAAGT
NKASNVISKNANGGWLQQFRLRHQRGGINGSGSGAVVARVNSQAAARFVE
SYLRGPPSAAAANLTAPVAARSRKKDGVGCRREGDEDGGDISLEDWLSWE
MRRGVKFDEAEEMGDTGKEGGKDQEASPIVSLTELCCRQVGADLPLYGAA
CALDKEVGEAQVRREHEAVAAGAPAEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEVEGEERGEEEEEGGSDDDSGESTTADAIQGIFSLLPSRCLARISLA
ASLSHAITDASLPLLCQPSALYLVLVGSFTDSGLARAMFPRLRQLSPTAS
WEDATQEPQLGGCAILQSLLVSSPGLTPLCVEGIGRHLTTVRHLAVPRCF
NADVTMTAKEVLSTVGASCGYVQELDLRGCHWLTEKSLIGWVSVGGKAAT
ATAGIVGLGGMDGLEKEEGEGMGVVVGGREGRREGRSRGMARMMEFDGPT
PDRGPPVALRRLYLDKRLAKAEAVRSTFAEVGGDCESRSGGKETKGVVKV
CVWEAKGKRALD*
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Synonyms
Publications