NO07G00670, NO07G00670 (gene) Nannochloropsis oceanica

Overview
NameNO07G00670
Unique NameNO07G00670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2206
Alignment locationchr7:242709..244914 -

Link to JBrowse

Properties
Property NameValue
DescriptionCullin-associated nedd8-dissociated protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:242709..244914 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0010265SCF complex assembly
GO:0016043cellular component organization
Homology
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: EWM27326.1 (cullin-associated nedd8-dissociated protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 510.4 bits (1313), Expect = 5.700e-141
Identity = 308/430 (71.63%), Postives = 347/430 (80.70%), Query Frame = 0 
Query:    1 MSLASLNVLLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLG------DPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATLALEG 425
            MSLAS+N+LL+K++DPDKDARFMATNDLC+ELSKDIKLD  MERRICQAVLKQLDDASNDVQSIAVKCLGILF++V E QV EI DKLC+L+LEGK ELRDIYSIGLKTLISD+PDSMGK VA+ L +RLL GV QE+ L++K+E LD LTD+L+RFGR+++  + +M++ GL  L   K  VRKRANAF+ ALA V+ D +              AE +GPREVQ LIQTVG V+RTVGHR+GKHL  +VPL LRFLG             XXXXXX   LRETIFAA ESVVLRCPREVT HLPLI++ AL FMKWDPNYTY        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  WKVRRAALKVLG II+SRPE+L+ LY QCADELIGRFKEREENVRLDVIGCF+CLLKATLALEG
Sbjct:    1 MSLASINLLLDKSSDPDKDARFMATNDLCSELSKDIKLDVTMERRICQAVLKQLDDASNDVQSIAVKCLGILFRKVQEMQVIEICDKLCSLLLEGKAELRDIYSIGLKTLISDVPDSMGKAVASHLGARLLSGVQQEQALDVKIECLDTLTDLLRRFGRELDGQYPAMMSTGLTHLQQGKVMVRKRANAFVGALAAVVPDAMXXXXXXXXXXXXQGAEGRGPREVQNLIQTVGTVARTVGHRVGKHLSLVVPLLLRFLGXXXXXXXXXXXXXXXXXXXXXXLRETIFAALESVVLRCPREVTVHLPLIIAAALKFMKWDPNYTY--AEEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWKVRRAALKVLGVIIMSRPELLESLYAQCADELIGRFKEREENVRLDVIGCFSCLLKATLALEG 428
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: XP_009829277.1 (hypothetical protein H257_05948 [Aphanomyces astaci] >ETV81419.1 hypothetical protein H257_05948 [Aphanomyces astaci])

HSP 1 Score: 374.8 bits (961), Expect = 3.700e-100
Identity = 232/417 (55.64%), Postives = 294/417 (70.50%), Query Frame = 0 
Query:    9 LLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELL---REIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATLAL 423
            LLEK TD DKD R+MAT+DLC EL KD++L  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV +I +KLC LIL GKPELRDIYSIGLKT+++D+    G  V+  L  RLL G+ Q     +K ++LD LT++LKRFG D  + H S++ + L++L   +  VRKR  + L AL +V +D LL++L+D LL   ++ +AA +    EV+TLIQT+G +SRTVGHRLG+HLPTIVPLFL F G  TP  +       NELRE  F   E+ VLRC  E+T H   I+SVA+ F K+DPNY Y                XXXXXXXXXXXXXXXXXXXXXXXXX WKVRRAAL+V+ AII +R E+L+++Y Q ++ LI RFKEREE+VR+DV G  + LL+AT+ L
Sbjct:   11 LLEKTTDFDKDERYMATSDLCNELQKDVELGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVGDICEKLCDLILNGKPELRDIYSIGLKTILTDVSTKTGASVSTALCGRLLIGIAQYADQAVKSDTLDILTELLKRFGHDFPSEHVSIMDLLLKELKDDRAFVRKRVTSCLGALGIVATDALLHRLVDHLLGDVKQASAASSSDSSEVRTLIQTIGTLSRTVGHRLGRHLPTIVPLFLTFCG--TPDNEAMQNDTANELRENCFQGLEAFVLRCHAEITPHTTDILSVAIAFSKYDPNYMY------GDDDGDDDTMXXXXXXXXXXXXXXXXXXXXXXXXXSWKVRRAALRVVSAIIGTRRELLELIYNQYSETLINRFKEREESVRIDVFGVVSDLLRATVLL 419
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: XP_008875653.1 (hypothetical protein H310_10940 [Aphanomyces invadans] >ETV95460.1 hypothetical protein H310_10940 [Aphanomyces invadans])

HSP 1 Score: 372.9 bits (956), Expect = 1.400e-99
Identity = 236/418 (56.46%), Postives = 301/418 (72.01%), Query Frame = 0 
Query:    9 LLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATLALEGNT 427
            LLEK TD DKD R+MAT+DLC EL KD+++  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV++I +KLC LIL GK ELRDIYSIGLKT+++D+    G  V+  L  RLL G+ Q     +K ++LD LT++LKRFG D    H S++ I L++L+  +  VRKR  + L AL VV +D LL++L++ LL ++  A +    EV+TLIQT+G +SRTVGHRLG+HL TIVPLFL F G  +P ++       NELRE  F   E+ V RC  E+  H   I+SVA+ F K+DPNY Y         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAAL+V+ AII +R E+L+++Y Q ++ LIGRFKEREE+VR+DV G  + LL+AT+ L+  T
Sbjct:   11 LLEKTTDFDKDERYMATSDLCNELQKDVEIGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVSDICEKLCDLILNGKQELRDIYSIGLKTILTDVSTKTGASVSTTLCGRLLIGIVQYSDQSVKSDTLDILTELLKRFGHDFSGEHVSIMDILLKELNDDRAFVRKRVTSCLGALGVVATDALLHRLVEHLLADVKQASSSDSSEVRTLIQTIGTLSRTVGHRLGRHLSTIVPLFLTFCG--SPDDESMQNDTANELRENCFQGLEAFVTRCHTEIAPHTTDILSVAIAFSKYDPNYMY--------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALRVVSAIIGTRQELLELIYNQYSETLIGRFKEREESVRIDVFGVVSDLLRATVLLQPAT 418
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: OQR84838.1 (Cullin-associated NEDD8-dissociated protein [Achlya hypogyna])

HSP 1 Score: 370.9 bits (951), Expect = 5.400e-99
Identity = 226/414 (54.59%), Postives = 291/414 (70.29%), Query Frame = 0 
Query:    7 NVLLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATL 421
            + LLEK TD DKD R+MAT+DLCTEL  D++L  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV +I +KLC LI  GK ELRDIYSIGLKT++SD+    G  ++  L  RLLGG+   +   IK E+LD LT++LKRFG D +  H +++ + L++L   +  VRKR  + L AL +V +D LL++L++ LL+ +   E     + +TLIQT+G +SR+VGHRLG+HLP IVPLFL F GDP+  ++       NELRE  F   ES +LRC  E+T H   I+SVA+ F K+DPNY Y+             XXXXXXXXXXXXXXXXXXXXXXXXXX  WKVRRAAL+V+ AII +RPE+L  LY Q ++ L+ RFKEREE+VR+DV   F+ LL++TL
Sbjct:   25 SALLEKTTDFDKDERYMATSDLCTELQNDVELGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVGDICEKLCDLIFTGKAELRDIYSIGLKTILSDVSQKTGASISTALCGRLLGGISHYDDQAIKSETLDILTELLKRFGSDFQTEHVAIMDLLLKELGDERAFVRKRVTSCLGALGIVAADALLHRLVEHLLQSV---ENNHNADKRTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCGDPS--DESMQNDVSNELRENCFQGLESFLLRCHAEITPHTTEILSVAMAFTKYDPNYMYD----------SENXXXXXXXXXXXXXXXXXXXXXXXXXXASWKVRRAALRVMSAIITTRPELLDTLYAQYSEPLVARFKEREESVRIDVFAVFSDLLRSTL 423
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: XP_008605515.1 (hypothetical protein SDRG_01749 [Saprolegnia diclina VS20] >EQC40671.1 hypothetical protein SDRG_01749 [Saprolegnia diclina VS20])

HSP 1 Score: 365.9 bits (938), Expect = 1.700e-97
Identity = 221/412 (53.64%), Postives = 289/412 (70.15%), Query Frame = 0 
Query:    9 LLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATL 421
            LLEK TD DKD R+MAT+DLC EL  D++L  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV +I +KLC LI  GKPELRDIYSIGLKT+++D+    G  ++  L  RLL G+       IK E+LD LT++LKRFG D ++ H +++ + L++L   +  VRKR  + L AL VV +D LL++L++ LL+ +   E     + +TLIQT+G +SR+VGHRLG+HLP IVPLFL F G  +P ++       NELRE  F   ES +LRC  E+T+H+  I++ A+ F K+DPNY Y+             XXXXXXXXXXXXXXXXXXXXXXXXXX  WKVRRAAL+V+ A+I +RPE+L  +Y +C++ LI RFKEREE+VR+DV   F+ LL+ TL
Sbjct:   10 LLEKTTDFDKDERYMATSDLCNELQNDVELGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVGDICEKLCDLIFTGKPELRDIYSIGLKTILTDVSQKTGASISTALCGRLLNGISHYADQAIKSETLDILTELLKRFGADFQSEHVAIMDLLLKELSDERAFVRKRVTSCLGALGVVAADALLHRLVEHLLQSV---ENNHEADKRTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCG--SPDDESMQNDVSNELRENCFQGLESFLLRCHAEITAHVKNIIATAMKFTKYDPNYMYD----------SENXXXXXXXXXXXXXXXXXXXXXXXXXXASWKVRRAALRVMSAVITTRPELLDDIYAECSEPLISRFKEREESVRIDVFSVFSDLLRVTL 406
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: OQR95878.1 (Cullin-associated NEDD8-dissociated protein, partial [Thraustotheca clavata])

HSP 1 Score: 358.2 bits (918), Expect = 3.600e-95
Identity = 223/410 (54.39%), Postives = 280/410 (68.29%), Query Frame = 0 
Query:   11 EKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATL 421
            E  TD DKD R+MAT+D+C EL  + +L  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV +I +KLC LI  GKPELRDIYSIGLKT++SD+    G  ++  LSSRLL GV       IK E+LD LT++LKRFG D ++ H +++   L++L   +  VRKR    L AL VV SD LL++L++ LL  +   ET    + +TLIQT+G +SR+VGHRLG+HLP IVPLFL+F G  +P  +       NELRE  F   ES +LRC  E+T H   I+SVA+ F K+DPNY Y+               XXXXXXXXXXXXXXXXXXXXXXXX  WKVRRAAL+V+ AII +RPE+L  LY   ++ LI RFKEREE+VR+DV   F+ LL+ TL
Sbjct: 2012 EPTTDFDKDERYMATSDICNELQNNPELGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVGDICEKLCELIFTGKPELRDIYSIGLKTILSDVSQKTGASISTNLSSRLLKGVEFYSDQGIKSETLDILTELLKRFGGDFQSEHVAIMDQLLKELSDERAFVRKRVTTCLGALGVVASDALLHRLVEHLLHSV---ETNHEADKRTLIQTIGTLSRSVGHRLGRHLPVIVPLFLQFCG--SPSNESMQNDNSNELRENCFQGLESFLLRCHAEITPHTTEILSVAMAFTKYDPNYMYD----------SGDEDXXXXXXXXXXXXXXXXXXXXXXXXASWKVRRAALRVMSAIITTRPELLDTLYASYSEPLIARFKEREESVRIDVFSVFSDLLRVTL 2406
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: GBG26235.1 (Cullin-associated NEDD8-dissociated protein 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 348.2 bits (892), Expect = 3.800e-92
Identity = 214/416 (51.44%), Postives = 280/416 (67.31%), Query Frame = 0 
Query:    2 SLASLNVLLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLK 418
            S   +  LLEK +D DKD R+MA NDLC  L  ++K+D ++ERRICQ +L++LDD+SNDVQ++AV+CL IL K+V E QV +I +KL  LIL GK +LRDIY+IGLKT +  +P SMG  +A  L+SRLLGGV  ++   IKLE LD LTD++K +G  M + H  + T  LQQL  PK  VRKRA A L  LA V+SD LL++++  LL +I     K   + +TLIQT+G +SR VG RLG HL  IVPLFL  L    P ++       +ELRE I  AFES V+RCP E  SH+P I+   L F+++DPNY Y                  XXXXXXXXXXXXXXXXXXXXXXXX KVRRA++KV+ A+I+SRP+ L  +Y +C   L+  FKER++NVRLD++ C++ LL+
Sbjct:    3 SAREVTALLEKTSDYDKDERYMAVNDLCRGLEGEVKMDIHLERRICQKILERLDDSSNDVQTVAVRCLNILVKKVEETQVRDICNKLANLILSGKADLRDIYAIGLKTCLGTLPASMGPKIAMDLASRLLGGVKMDQDESIKLECLDLLTDLIKFYGGSMTSEHSHISTTALQQLSFPKPAVRKRAAACLGRLATVVSDDLLDRIIQTLLEQI--ENPKPGSDKRTLIQTIGTISRMVGFRLGSHLQRIVPLFLASL--KKPGDESMQTEESDELRENILHAFESFVIRCPHEAASHIPEILEPTLAFLRYDPNYNYN------DEDDDGEDMEAXXXXXXXXXXXXXXXXXXXXXXXXXKVRRASVKVVRAVIISRPDSLDEIYAKCGGLLLNCFKERDDNVRLDLVSCYSVLLR 408
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: XP_012212834.1 (hypothetical protein SPRG_18016, partial [Saprolegnia parasitica CBS 223.65] >KDO16458.1 hypothetical protein SPRG_18016, partial [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 346.3 bits (887), Expect = 1.400e-91
Identity = 211/398 (53.02%), Postives = 277/398 (69.60%), Query Frame = 0 
Query:   23 MATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKATL 421
            MAT+DLC EL  DI+L  ++ER+IC AVLKQLDD SNDVQSIAVKCLGIL  +V E QV +I +KLC LI  GKPELRDIYSIGLKT+++D+    G  ++  L  RLL G+       IK E+LD LT++LKRFG D ++ H +++ + L++L   +  VRKR  + L AL VV +D LL++L++ LL+ +   E     + +TLIQT+G +SR+VGHRLG+HLP IVPLFL F G  +P ++       NELRE  F   ES +LRC  E+T H+  I++ A+ F K+DPNY Y+             XXXXXXXXXXXXXXXXXXXXXXXXXX  WKVRRAAL+V+ A+I +RPE+L  +Y +C++ L+ RFKEREE+VR+DV   F+ LL+ TL
Sbjct:    1 MATSDLCNELQNDIELGPDLERKICAAVLKQLDDKSNDVQSIAVKCLGILVTKVQEKQVGDICEKLCDLIFTGKPELRDIYSIGLKTILTDVSQKTGASISTALCGRLLNGISHYADQAIKSETLDILTELLKRFGADFQSEHVAIMDLLLKELSDERAFVRKRVTSCLGALGVVAADALLHRLVEHLLQSV---ENNHEADKRTLIQTIGTLSRSVGHRLGRHLPVIVPLFLTFCG--SPDDESMQNDVSNELRENCFQGLESFLLRCHAEITVHVKNIIATAMKFTKYDPNYMYD----------SENXXXXXXXXXXXXXXXXXXXXXXXXXXASWKVRRAALRVMSAVITTRPELLDDIYAECSEPLVSRFKEREESVRIDVFSVFSDLLRVTL 383
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: ETI56808.1 (hypothetical protein F443_00803 [Phytophthora parasitica P1569] >ETL49951.1 hypothetical protein L916_00738 [Phytophthora parasitica])

HSP 1 Score: 345.1 bits (884), Expect = 3.200e-91
Identity = 206/411 (50.12%), Postives = 280/411 (68.13%), Query Frame = 0 
Query:    9 LLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKAT 420
            LL+K TD DKD R+MAT+DLC EL+KD+ L   +E ++C AVLKQLDD SNDVQSIAVKCLGIL  +V  +QV +I  KLC LIL GK ELRDIYSIGLKT+++D+  + G  +A  + +RLL G+++++   +K E+LD LTD+L+RFG D+   H +++ + + QL      VRKRA A + +L V+ SD L+++L++ L++ I  +       V+TLIQT+G +SRT GHRLG+HL  ++ + ++F GD  P+++       +ELR   F AFE+ V+RC  E+T H+ +I+ + + F+ +DPNY Y                   XXXXXXXXXXXXXXXXXXXXX  WKVRRA L+VL AII +RPE+L+ LY  CA  LI RFKEREENVR+DV   FA LL+ T
Sbjct:   11 LLDKTTDFDKDERYMATSDLCVELNKDVDLGPYLEPKVCAAVLKQLDDKSNDVQSIAVKCLGILVTKVQVSQVADICAKLCDLILNGKSELRDIYSIGLKTIVADVSQTTGASIATGICTRLLTGLNKDKDAAVKAETLDILTDLLRRFGYDVATEHATIMELLMAQLTDESPLVRKRATACVGSLGVMASDVLVSRLVEHLIKGIQGSTDSS--NVRTLIQTIGMLSRTAGHRLGQHLDAVIRILVQFCGD--PEDESLQNEDSDELRGNCFQAFEAFVIRCHNEITPHVEVILKLVMQFIPYDPNYNY-----------VNSADEDEXXXXXXXXXXXXXXXXXXXXXTSWKVRRATLRVLTAIITTRPELLEHLYIHCAQPLISRFKEREENVRIDVFAVFAELLRTT 406
[Close]
BLAST of NO07G00670 vs. NCBI_GenBank
Match: XP_008890357.1 (hypothetical protein PPTG_00673 [Phytophthora parasitica INRA-310] >ETK96592.1 hypothetical protein L915_00743 [Phytophthora parasitica] >ETN24276.1 hypothetical protein PPTG_00673 [Phytophthora parasitica INRA-310] >ETP26590.1 hypothetical protein F441_00786 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 345.1 bits (884), Expect = 3.200e-91
Identity = 206/411 (50.12%), Postives = 280/411 (68.13%), Query Frame = 0 
Query:    9 LLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAVLKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELRDIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDXXXXXXKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYTYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLKAT 420
            LL+K TD DKD R+MAT+DLC EL+KD+ L   +E ++C AVLKQLDD SNDVQSIAVKCLGIL  +V  +QV +I  KLC LIL GK ELRDIYSIGLKT+++D+  + G  +A  + +RLL G+++++   +K E+LD LTD+L+RFG D+   H +++ + + QL      VRKRA A + +L V+ SD L+++L++ L++ I  +       V+TLIQT+G +SRT GHRLG+HL  ++ + ++F GD  P+++       +ELR   F AFE+ V+RC  E+T H+ +I+ + + F+ +DPNY Y                   XXXXXXXXXXXXXXXXXXXXX  WKVRRA L+VL AII +RPE+L+ LY  CA  LI RFKEREENVR+DV   FA LL+ T
Sbjct:   11 LLDKTTDFDKDERYMATSDLCVELNKDVDLGPYLEPKVCAAVLKQLDDKSNDVQSIAVKCLGILVTKVQVSQVADICAKLCDLILNGKSELRDIYSIGLKTIVADVSQTTGASIATGICTRLLTGLNKDKDAAVKAETLDILTDLLRRFGYDVATEHATIMELLMAQLTDESPLVRKRATACVGSLGVMASDVLVSRLVEHLIKGIQGSTDSS--NVRTLIQTIGMLSRTAGHRLGQHLDAVIRILVQFCGD--PEDESLQNEDSDELRGNCFQAFEAFVIRCHNEITPHVEVILKLVMQFIPYDPNYNY-----------VNSADEDEXXXXXXXXXXXXXXXXXXXXXTSWKVRRATLRVLTAIITTRPELLEHLYIHCAQPLISRFKEREENVRIDVFAVFAELLRTT 406
The following BLAST results are available for this feature:
BLAST of NO07G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27326.15.700e-14171.63cullin-associated nedd8-dissociated protein 1 [Nan... [more]
XP_009829277.13.700e-10055.64hypothetical protein H257_05948 [Aphanomyces astac... [more]
XP_008875653.11.400e-9956.46hypothetical protein H310_10940 [Aphanomyces invad... [more]
OQR84838.15.400e-9954.59Cullin-associated NEDD8-dissociated protein [Achly... [more]
XP_008605515.11.700e-9753.64hypothetical protein SDRG_01749 [Saprolegnia dicli... [more]
OQR95878.13.600e-9554.39Cullin-associated NEDD8-dissociated protein, parti... [more]
GBG26235.13.800e-9251.44Cullin-associated NEDD8-dissociated protein 1 [Aur... [more]
XP_012212834.11.400e-9153.02hypothetical protein SPRG_18016, partial [Saproleg... [more]
ETI56808.13.200e-9150.12hypothetical protein F443_00803 [Phytophthora para... [more]
XP_008890357.13.200e-9150.12hypothetical protein PPTG_00673 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL093nonsL093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR132ngnoR132Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00670.3NO07G00670.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G00670.2NO07G00670.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G00670.1NO07G00670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00670.3NO07G00670.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G00670.2NO07G00670.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G00670.1NO07G00670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00670 ID=NO07G00670|Name=NO07G00670|organism=Nannochloropsis oceanica|type=gene|length=2206bp
AAGGAGTCTGATGGGGAAAACCCTTATAACGCAACCACCAACCCGCCCGT
CAACTCATGGTATTACGGTATTCCGCTTCATCTGCTGCTTGGGTGGACAC
AATGGAGCGGGCGGGGGGACGCCGGCGGTGCCAATTACCCCAAACCTTTC
TGGATACTCGCTCCTCGTCCTTCTTTGCCTCTAACGCATCGGCCAGCCCA
CCACTCACATCGCAAACTCACGCTGACTAAACACACATCACACCCTCATA
ACCTTATAGAGAGCCATAATCATGAGCCTCGCTTCGCTCAACGTCTTGTT
GGAGAAGGCCACGGATCCAGACAAGgtaaggcaagagagagacgtcacca
gcaccccctcgcctcaccatgttcccaccggcccgcctcattccccccct
cccacaaacacaacaccccagGATGCCCGTTTCATGGCCACCAACGATTT
ATGTACAGAGCTGTCCAAGGACATCAAGCTCGATGCGAACATGGTGAGAT
TTTGCTTTCGAATTGGTGTGTGTTCATGCCCGCCTATCCCCCTCTTTGGT
AATAGGTCATCTTCGTATGCCACGTATTTCTGTCTTGAAATATGAGGTGG
CCAGGCTCAACTGTCCCTCTTCTGCTTTGGACTCCGTCCCGGTTGTCTCC
TTCCTAGGAGGTTGATTGGTTGTTGATAATAAGGCTCCTGCGTCCGTAAT
CTGCCCTCCCCCATCTTCGTCTCTCTTCCCACACAGGAACGGCGCATCTG
TCAAGCGGTTCTCAAGCAGCTCGACGACGCCTCCAATGACGTGCAGTCGA
TTGCCGTCAAGTGCCTTGGCATCCTCTTTAAAAGGGgtaaatatttctcc
ttcctctctcccttctcccctctctcctctcttttttaagtaacgagccg
tgaaggtgttgaactctcactctctcccttcctccccttcctttcctctc
tcccccagTACACGAGGCGCAGGTGACGGAGATCTCCGACAAACTCTGTA
CCCTCATATTGGAGGGCAAGCCGGAGTTGCGTGACATTTATTCGATCGGG
CTCAAGACTCTGATTTCGGATATCCCGGACAGTATGGGCAAGgtattcat
gatgtgtatttccccacatttccttctctcccatcctgcctcctttcctt
cgggtcagttcttttgtcattcatcccatccttccctttctttcctccgt
ccttcctccctccctccttccctcccttcctcagGTCGTTGCTAATCGCC
TTAGCTCCCGTCTGCTCGGTGGTGTCCATCAGGAAGAAACCTTGGAGATT
AAGCTTGAAAGCCTCGACAACCTCACCGACATCCTCAAGCGCTTCGGCCG
CGACATGGAAGCGGCTCACGGGTCCATGATCACCATCGGCCTCCAACAGC
TCCACCATCCCAAAACTCCCGTGAGGAAACGCGCAAATGCATTCCTCGCC
GCCCTGGCCGTGGTGATATCAGACCCCTTACTGAACCAATTGATGGACGA
ACTCCTTCGCGAGATTGCCGCAGCCGAGACCAAGGGCCCGCGAGAAGTGC
AAACACTCATTCAGACGGTTGGTGCTGTTTCTCGTACCGTCGGGCATCGT
CTGGGCAAGCATCTCCCTACTATTGTCCCGCTCTTCCTCCGGTTTTTGGG
AGACCCTACCCCGAAGGAAGATGAGGACGAGGATGACGAAAAGAATGAGT
TGAGAGAGACGATTTTTGCGGCGTTTGAAAGCGTGGTGCTCAGGTGTCCC
CGAGAGGTGACGTCACATTTGCCTTTGATTGTGTCGGTGGCCCTGGGGTT
CATGAAGTGGGACCCGAACTATACGTATGAGGAGGAGGAGGGTGGGGTGG
AGGAAGGGATGGAGATGGATGAGGAAAAGGAGGTGGAGGAGGAGGAGGAA
GAGGAGGAGGAGGAGGAGGAGGACTATGGAGGGTCAGACGATGACGACAC
GAGTTGGAAGGTGAGGAGGGCGGCGTTGAAGGTGTTGGGGGCAATAATAC
TCTCGAGGCCGGAGATGCTCAAAATATTGTATGAGCAGTGTGCGGATGAA
TTGATTGGGCGGTTTAAAGAGAGGGAGGAGAATGTGCGGTTGGATGTGAT
CGGGTGTTTCGCGTGCCTGTTGAAGGCGACTTTAGCTTTGGAGGGTAATA
CGGGTGGGGGGAAGGGAGGGAAAGGGCGAGTGGGAGGAGGGGGGGGGGGG
GGTTGA
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protein sequence of NO07G00670.3

>NO07G00670.3-protein ID=NO07G00670.3-protein|Name=NO07G00670.3|organism=Nannochloropsis oceanica|type=polypeptide|length=327bp
MGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGS
MITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAA
ETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDE
DEDDEKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYT
YEEEEGGVEEGMEMDEEKEVEEEEEEEEEEEEDYGGSDDDDTSWKVRRAA
LKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLK
ATLALEGNTGGGKGGKGRVGGGGGGG*
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protein sequence of NO07G00670.2

>NO07G00670.2-protein ID=NO07G00670.2-protein|Name=NO07G00670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=327bp
MGKVVANRLSSRLLGGVHQEETLEIKLESLDNLTDILKRFGRDMEAAHGS
MITIGLQQLHHPKTPVRKRANAFLAALAVVISDPLLNQLMDELLREIAAA
ETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTIVPLFLRFLGDPTPKEDE
DEDDEKNELRETIFAAFESVVLRCPREVTSHLPLIVSVALGFMKWDPNYT
YEEEEGGVEEGMEMDEEKEVEEEEEEEEEEEEDYGGSDDDDTSWKVRRAA
LKVLGAIILSRPEMLKILYEQCADELIGRFKEREENVRLDVIGCFACLLK
ATLALEGNTGGGKGGKGRVGGGGGGG*
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protein sequence of NO07G00670.1

>NO07G00670.1-protein ID=NO07G00670.1-protein|Name=NO07G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MSLASLNVLLEKATDPDKDARFMATNDLCTELSKDIKLDANMERRICQAV
LKQLDDASNDVQSIAVKCLGILFKRVHEAQVTEISDKLCTLILEGKPELR
DIYSIGLKTLISDIPDSMGKVVANRLSSRLLGGVHQEETLEIKLESLDNL
TDILKRFGRDMEAAHGSMITIGLQQLHHPKTPVRKRANAFLAALAVVISD
PLLNQLMDELLREIAAAETKGPREVQTLIQTVGAVSRTVGHRLGKHLPTI
VPLFLRFLGDPTPKEDEDEDDEKNELRETIFAAFESVVLRCPREVTSHLP
LIVSVALGFMKWDPNYTYEEEEGGVEEGMEMDEEKEVEEEEEEEEEEEED
YGGSDDDDTSWKVRRAALKVLGAIILSRPEMLKILYEQCADELIGRFKER
EENVRLDVIGCFACLLKATLALEGNTGGGKGGKGRVGGGGGGG*
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Synonyms
Publications