NO07G00280, NO07G00280 (gene) Nannochloropsis oceanica

Overview
NameNO07G00280
Unique NameNO07G00280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2170
Alignment locationchr7:111275..113444 -

Link to JBrowse

Properties
Property NameValue
DescriptionAcyltransferase 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:111275..113444 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016746transferase activity, transferring acyl groups
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO07G00280 vs. NCBI_GenBank
Match: EWM27359.1 (Acyltransferase 3 [Nannochloropsis gaditana])

HSP 1 Score: 557.4 bits (1435), Expect = 6.200e-155
Identity = 336/700 (48.00%), Postives = 408/700 (58.29%), Query Frame = 0
Query:   47 SPPPPTQVDMQAHVGLRGVAAVWIVVFHCLGDPKYHSGWVVALQGSSLMPLFFMLSGFSLTVTYGRTMWASSSSSCLSCFSRRRQPDINKSIAKDV-VHTDIELVEEGKRLSSRPVGCSSQPS----PSPASKRPXXXXSFSARSLPPFDTRAFYQNRIARVMPVYWLSILVSIPLWLLNIGDFPFALQTFLPSLASSVIPVTTLFSFLTGSYLAAINPVGWFITTLVFFWFFFPYWLPTMQRLSDRALVNTVTWGFWLQLLLIQGIYSLMPLITDIRPFGTATTNPLSRFPLFLMGMAAGVLTLRY----PVVGGGRVGRTADRDEHXXXXXXXXXXXCSRSVE-GKK--EDCLPRHTNSKQLQMRILNGAGAATEGGGVLGEG----GREGGVKEDESTVEVIAVEEMEEQGANASMPWPACIFGLPLPV-CLTSRXXXXXXXXXXXXXXXXXXM-AFFIPP-----------------------------------------------HSPRTQSEWARLATQQSLALLFLTLLISGIDTGVRVLSQGQHTISAQVWFQGLVAMTQLNVFLALTRDGNLSLASRFLRLPFCKWIGRISMNIYLIHYPLLGYLALGLHFPQSKDLLNCYNLGSGGVE-DM-TEREALRVTECQTLIKDVRELPWWSVFVILPLAALLGEALARWVEEPARRALRHRKG 680
            SP  P  VDMQ+H GLRGVAAVWIV+FHC GDP+YH+GWVVALQGSSLMPLFFMLSGFSL VTYGRT WA SS +        +Q   + S +  + V T ++ +E+G  L       +S P+    P+P                P F TR FYQNRIARV+PVYWLSIL+SIPLWLLNI D+PF+LQTFLPSLA+S+IPVT+LFS     Y+AAINPVGWFITTL FFW FFP WLP MQRLSDR L+  V  G+WLQL LIQ +YS++PL    RPF TAT NPLSRFPLFLMGMAAG+L+LR+     + GG    RT    +            CS+    G+K  E  +     S++     +        G  +  +G    G    +K +   VE        E+G +   PWPAC+  LPLP  C  SR                  + +   PP                                                 P T   WA  A+Q +LALL  TLL++GIDTG R+++QG+HTI AQVW+QG+V M QLNV LALTRD   S A+RFLR+P C W+G ISMN+YL+HYPLLGYLAL LH      LL C++LG GG E DM  E EA RV  CQ LIKDVR LPWWSV +++P+A  L E + RWVE PAR+A R  KG
Sbjct:   21 SPLRPLPVDMQSHGGLRGVAAVWIVIFHCFGDPRYHAGWVVALQGSSLMPLFFMLSGFSLAVTYGRTTWAVSSFTWPWGGKNEQQGASSSSQSHSICVVTGMDRMEQGNELPETTTVATSVPACLDPPTPLQ--------------PFFPTRDFYQNRIARVIPVYWLSILISIPLWLLNIADYPFSLQTFLPSLATSIIPVTSLFSAWNEHYIAAINPVGWFITTLAFFWLFFPVWLPRMQRLSDRGLLGVVVVGYWLQLFLIQSLYSVLPLFFHFRPFTTATMNPLSRFPLFLMGMAAGLLSLRHASSEKIPGGPH--RTLPTPQAGGATHSYNPLACSKGQHPGRKGSEIIIKSPVRSQEKANVHMRPPPGPLTGDTLTADGLFPTGFNSIIKAENGHVET-----SPEKGDSTVFPWPACVLCLPLPTPCAASRPPVKDHPPSPSRPPRGSTLHSERAPPPPLPTDRGIPSTISSFPLAHVCDEPSPXXXXXXXXXXXXPELLLLHWTPPSTPKGWALAASQHALALLLCTLLVAGIDTGYRIVTQGRHTIGAQVWYQGVVVMAQLNVVLALTRDEGRSHAARFLRIPVCAWLGSISMNLYLLHYPLLGYLALALHPSHVPALLRCFHLGRGGKEGDMEAEVEAERVVRCQALIKDVRVLPWWSVLIVVPVAIGLAEGVGRWVEAPARQAWRRGKG 699          
BLAST of NO07G00280 vs. NCBI_GenBank
Match: OLP79454.1 (Cell wall alpha-1,3-glucan synthase mok14 [Symbiodinium microadriaticum])

HSP 1 Score: 74.3 bits (181), Expect = 1.600e-9
Identity = 59/209 (28.23%), Postives = 98/209 (46.89%), Query Frame = 0
Query:  190 FDTRAFYQNRIARVMPVYWLSILVSIPLWLLNIGDFPFA-LQTFLPSLASSVIPVTTLFSF--------------------LTGSY---------------LAAINPVGWFITTLVFFWFFFPYWLPTMQRLSDRALVNTVTWGFWLQLLLIQGIYSLMPLIT----------DIRP----FGTATTNPLSRFPLFLMGMAAGVLTLRY 349
            F  + F+  R+AR++P Y+L+  +++PL  L  G F +   +T + S+ S+++ +TTLF+                      TG +               L  IN   W + TLV+F+  FP+ L  +QR ++  L   +   +W+QLL+   ++ L   I           +I P    F  AT NP+ R PLF+MG+ AG+L  R+
Sbjct: 1144 FPYKEFFSKRVARLLPAYYLTTFLAVPLIWLGFGPFAWKDTRTLVGSIVSNILCLTTLFNCQLPPWPYGCQWDQTFPRYNETTGEHYPPECNKEERGLPIGLKNINGPSWTVCTLVWFYLAFPFLLKYIQRFNNMQLFILIRVCYWVQLLVSIALFLLYTGIEYGGVRQLRYWNIAPGGLAFTVATQNPIFRVPLFIMGICAGLLCNRH 1352          
BLAST of NO07G00280 vs. NCBI_GenBank
Match: XP_009033047.1 (hypothetical protein AURANDRAFT_61209 [Aureococcus anophagefferens] >EGB11938.1 hypothetical protein AURANDRAFT_61209 [Aureococcus anophagefferens])

HSP 1 Score: 65.9 bits (159), Expect = 5.700e-7
Identity = 83/328 (25.30%), Postives = 119/328 (36.28%), Query Frame = 0
Query:   61 GLRGVAAVWIVVFHCLGDPKYHSGWVVALQGSSLMPLFFMLSGFSLTVTYGRTMWASSSSSCLSCFSRRRQPDINKSIAKDVVHTDIELVEEGKRLSSRPVGCSSQPSPSPASKRPXXXXSFSARSLPPFDTRAFYQNRIARVMPVYWLSILVSIPLWLLNIGDFPFALQTFLPSLASSVIPVTTLFSFLTGSYLAAINPVGWFITTLVFFWFFFPYWLPTMQRLSD----------------------------RALVNTVTWGFWLQLLLIQGIYSLMPLITDIRPFGTATTNPLSRFPLFLMGMAAGVLTLRYPVVGGGRVGRTA 361
            GLRG+ +++++++H      ++S     L GS+LMP FF+LSGFSL V YG    A  S+ C                             +G R                                   D RAFY+NR AR++P ++L    S+PL  L  G    +    + +   + +  TT F    GS+ A      W I+TL  F+  FP+  P +QR +                              +L   +   FW QL        L      + P  T    P  RFP+FL G  AG+L LR         G TA
Sbjct:  995 GLRGLLSLYVMIYHYF----WYSTLQWELHGSALMPPFFVLSGFSLAVGYGSKPLAPGSACCGE-------------------------AADGDR---------------------------------ALDWRAFYRNRAARILPTHYLMNAASVPLSFLGYG--LVSKNALVSAGVLTAVCATTWFGPNFGSFCAP----SWTISTLCGFYLVFPWVAPRLQRAAGSPPWYAILGLGMPAGCCRVPTPPAEADATSLAAHMRLCFWAQLFSAAWSIGLGIATGMVGPMATMWAVP--RFPVFLAGAYAGLLALRGGPAAVADAGLTA 1252          
The following BLAST results are available for this feature:
BLAST of NO07G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 3
Match NameE-valueIdentityDescription
EWM27359.16.200e-15548.00Acyltransferase 3 [Nannochloropsis gaditana][more]
OLP79454.11.600e-928.23Cell wall alpha-1,3-glucan synthase mok14 [Symbiod... [more]
XP_009033047.15.700e-725.30hypothetical protein AURANDRAFT_61209 [Aureococcus... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000874NSK000874Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00280.1NO07G00280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580004gene_2334Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100771g2gene3200Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00280.1NO07G00280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00280 ID=NO07G00280|Name=NO07G00280|organism=Nannochloropsis oceanica|type=gene|length=2170bp
GCACACGGATAAGAAGAGGCGGCTGGGGAGCTGCACAACGCGATGGTAGC
TACGATGTGGGCACCCTTCTCCGCTGCCAAATCAGGGAAGGGGGTCGATA
TTATGGACAGAAGCAACCCCAGTGATATAATCCACGCAAAGGAAGACTCT
GTTGCCGTCCAAAAACCCAACCATCAACTATCACCACCTCCGCCGACTCA
AGTGGACATGCAGGCACATGTTGGCCTCCGCGGAGTCGCTGCCGTCTGGA
TCGTAGTCTTTCACTGCCTCGGTGACCCTAAGTACCATTCTGGATGGGTA
GTGGCCTTGCAAGGCTCTAGCTTGATGCCACTCTTCTTCATGCTCTCGGG
CTTCTCCTTGACCGTAACCTATGGCCGGACGATGTGGGCGTCTTCGTCGT
CGTCTTGTTTGTCTTGTTTCAGCCGACGTCGTCAACCAGACATCAACAAA
AGCATAGCTAAAGATGTTGTACATACTGATATTGAACTAGTGGAGGAAGG
AAAGCGCCTTTCTTCCAGGCCCGTCGGCTGCTCTTCTCAGCCATCCCCCT
CGCCCGCCTCGAAACGGCCGCCCTCTCCGTCCTCCTTCTCCGCTCGCTCC
CTCCCGCCCTTTGACACCCGCGCGTTCTATCAGAACCGCATTGCGCGTGT
AATGCCCGTATATTGGCTATCCATACTCGTCTCCATCCCTCTCTGGCTCC
TAAATATAGGCGACTTCCCCTTCGCACTCCAAACATTCCTCCCCTCCCTC
GCCAGTAGTGTCATTCCCGTGACCACCCTCTTCTCCTTCCTCACCGGCAG
CTACCTTGCGGCCATCAATCCCGTAGGATGGTTCATCACGACCCTTGTCT
TCTTCTGGTTTTTTTTCCCTTACTGGCTGCCCACCATGCAACGTCTTTCT
GACCGCGCCCTGGTCAACACCGTCACCTGGGGCTTCTGGCTACAGCTTCT
CCTCATTCAGGGTATCTATTCGCTCATGCCTCTTATCACGGACATCCGGC
CCTTTGGGACTGCCACCACCAATCCTCTCTCTCGCTTTCCCTTGTTCTTG
ATGGGCATGGCGGCGGGCGTGTTAACTCTGAGGTACCCCGTGGTTGGAGG
AGGTAGGGTGGGAAGGACGGCAGATAGAGACGAGCACAGTAGTAGTAGTG
GTAGTAGTAGCAGCAGCAGATGCAGCAGGAGCGTTGAAGGGAAAAAGGAG
GATTGTTTGCCTCGGCACACCAACAGCAAGCAGCTGCAAATGCGTATTCT
AAATGGAGCAGGTGCAGCCACAGAAGGTGGAGGAGTACTCGGGGAAGGAG
GGCGGGAAGGAGGAGTGAAAGAAGACGAGTCCACCGTAGAGGTAATAGCA
GTGGAGGAAATGGAAGAACAAGGAGCGAATGCATCGATGCCCTGGCCCGC
ATGCATTTTCGGCCTGCCCTTGCCCGTGTGCCTCACATCTCGCCGGAACA
GCAGTAGCGCTAGTTGCACAACCACAACGGTCCCCACTGCGGCGAAAATG
GCATTTTTCATCCCCCCTCATTCTCCGCGGACCCAGTCAGAGTGGGCTCG
CCTCGCCACGCAACAGTCCCTGGCCCTTCTTTTCCTCACCTTACTCATTT
CCGGCATCGACACCGGTGTTCGCGTTCTCTCACAAGGCCAACACACCATC
AGTGCCCAGGTCTGGTTCCAGGGGTTGGTCGCCATGACTCAGCTGAACGT
CTTCCTAGCCCTCACTCGGGACGGAAATCTCTCCCTGGCATCCCGTTTCC
TTCGCCTGCCTTTCTGCAAGTGGATCGGGCGCATTTCGATGAATATCTAC
TTGATCCATTATCCTCTCCTTGGCTATCTGGCCCTGGGGTTACACTTTCC
CCAATCCAAGGACCTCCTAAACTGCTATAATCTAGGGAGTGGCGGGGTGG
AGGATATGACAGAGCGAGAGGCTTTACGAGTGACCGAGTGTCAGACCTTA
ATCAAAGATGTGAGAGAGTTGCCGTGGTGGAGTGTGTTTGTGATCTTGCC
TTTGGCTGCGCTGCTTGGGGAAGCACTGGCACGTTGGGTGGAGGAGCCGG
CAAGGCGCGCGTTGAGGCACCGGAAGGGGTAGTCCCACAGAAAAAGAGGA
GATGTTGAGACTGGTAAGAATTGTTTGAGAGAATCAAACAAACAAGATCA
GAAAAAAGAGTGTGGTAGCA
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protein sequence of NO07G00280.1

>NO07G00280.1-protein ID=NO07G00280.1-protein|Name=NO07G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bp
MVATMWAPFSAAKSGKGVDIMDRSNPSDIIHAKEDSVAVQKPNHQLSPPP
PTQVDMQAHVGLRGVAAVWIVVFHCLGDPKYHSGWVVALQGSSLMPLFFM
LSGFSLTVTYGRTMWASSSSSCLSCFSRRRQPDINKSIAKDVVHTDIELV
EEGKRLSSRPVGCSSQPSPSPASKRPPSPSSFSARSLPPFDTRAFYQNRI
ARVMPVYWLSILVSIPLWLLNIGDFPFALQTFLPSLASSVIPVTTLFSFL
TGSYLAAINPVGWFITTLVFFWFFFPYWLPTMQRLSDRALVNTVTWGFWL
QLLLIQGIYSLMPLITDIRPFGTATTNPLSRFPLFLMGMAAGVLTLRYPV
VGGGRVGRTADRDEHSSSSGSSSSSRCSRSVEGKKEDCLPRHTNSKQLQM
RILNGAGAATEGGGVLGEGGREGGVKEDESTVEVIAVEEMEEQGANASMP
WPACIFGLPLPVCLTSRRNSSSASCTTTTVPTAAKMAFFIPPHSPRTQSE
WARLATQQSLALLFLTLLISGIDTGVRVLSQGQHTISAQVWFQGLVAMTQ
LNVFLALTRDGNLSLASRFLRLPFCKWIGRISMNIYLIHYPLLGYLALGL
HFPQSKDLLNCYNLGSGGVEDMTEREALRVTECQTLIKDVRELPWWSVFV
ILPLAALLGEALARWVEEPARRALRHRKG*
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Synonyms
Publications