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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr7 | genome | chr7:111275..113444 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G00280.1 vs.
Match: EWM27359.1 (Acyltransferase 3 [Nannochloropsis gaditana]) HSP 1 Score: 365.9 bits (938), Expect = 2.700e-97 Identity = 223/434 (51.38%), Postives = 272/434 (62.67%), Query Frame = 0
Query: 47 SPPPPTQVDMQAHVGLRGVAAVWIVVFHCLGDPKYHSGWVVALQGSSLMPLFFMLSGFSLTVTYGRTMWASSSSSCLSCFSRRRQPDINKSIAKDV-VHTDIELVEEGKRLSSRPVGCSSQPSPSPASKRPPSPSSFSARSLPPFDTRAFYQNRIARVMPVYWLSILVSIPLWLLNIGDFPFALQTFLPSLASSVIPVTTLFSFLTGSYLAAINPVGWFITTLVFFWFFFPYWLPTMQRLSDRALVNTVTWGFWLQLLLIQGIYSLMPLITDIRPFGTATTNPLSRFPLFLMGMAAGVLTLRY----PVVGGGRVGRTADRDEHSSSSGSSSSSRCSRSVE-GKK--EDCLPRHTNSKQLQMRILNGAGAATEGGGVLGEG----GREGGVKEDESTVEVIAVEEMEEQGANASMPWPACIFGLPLPV-CLTSR 468
SP P VDMQ+H GLRGVAAVWIV+FHC GDP+YH+GWVVALQGSSLMPLFFMLSGFSL VTYGRT WA SS + +Q + S + + V T ++ +E+G L +S P A PP+P P F TR FYQNRIARV+PVYWLSIL+SIPLWLLNI D+PF+LQTFLPSLA+S+IPVT+LFS Y+AAINPVGWFITTL FFW FFP WLP MQRLSDR L+ V G+WLQL LIQ +YS++PL RPF TAT NPLSRFPLFLMGMAAG+L+LR+ + GG RT + ++ S + CS+ G+K E + S++ + G + +G G +K + VE E+G + PWPAC+ LPLP C SR
Sbjct: 21 SPLRPLPVDMQSHGGLRGVAAVWIVIFHCFGDPRYHAGWVVALQGSSLMPLFFMLSGFSLAVTYGRTTWAVSSFTWPWGGKNEQQGASSSSQSHSICVVTGMDRMEQGNELPETTTVATSVP----ACLDPPTPLQ------PFFPTRDFYQNRIARVIPVYWLSILISIPLWLLNIADYPFSLQTFLPSLATSIIPVTSLFSAWNEHYIAAINPVGWFITTLAFFWLFFPVWLPRMQRLSDRGLLGVVVVGYWLQLFLIQSLYSVLPLFFHFRPFTTATMNPLSRFPLFLMGMAAGLLSLRHASSEKIPGGPH--RTLPTPQAGGATHSYNPLACSKGQHPGRKGSEIIIKSPVRSQEKANVHMRPPPGPLTGDTLTADGLFPTGFNSIIKAENGHVET-----SPEKGDSTVFPWPACVLCLPLPTPCAASR 437
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G00280.1 ID=NO07G00280.1|Name=NO07G00280.1|organism=Nannochloropsis oceanica|type=mRNA|length=2170bp
GCACACGGATAAGAAGAGGCGGCTGGGGAGCTGCACAACGCGATGGTAGC
TACGATGTGGGCACCCTTCTCCGCTGCCAAATCAGGGAAGGGGGTCGATA
TTATGGACAGAAGCAACCCCAGTGATATAATCCACGCAAAGGAAGACTCT
GTTGCCGTCCAAAAACCCAACCATCAACTATCACCACCTCCGCCGACTCA
AGTGGACATGCAGGCACATGTTGGCCTCCGCGGAGTCGCTGCCGTCTGGA
TCGTAGTCTTTCACTGCCTCGGTGACCCTAAGTACCATTCTGGATGGGTA
GTGGCCTTGCAAGGCTCTAGCTTGATGCCACTCTTCTTCATGCTCTCGGG
CTTCTCCTTGACCGTAACCTATGGCCGGACGATGTGGGCGTCTTCGTCGT
CGTCTTGTTTGTCTTGTTTCAGCCGACGTCGTCAACCAGACATCAACAAA
AGCATAGCTAAAGATGTTGTACATACTGATATTGAACTAGTGGAGGAAGG
AAAGCGCCTTTCTTCCAGGCCCGTCGGCTGCTCTTCTCAGCCATCCCCCT
CGCCCGCCTCGAAACGGCCGCCCTCTCCGTCCTCCTTCTCCGCTCGCTCC
CTCCCGCCCTTTGACACCCGCGCGTTCTATCAGAACCGCATTGCGCGTGT
AATGCCCGTATATTGGCTATCCATACTCGTCTCCATCCCTCTCTGGCTCC
TAAATATAGGCGACTTCCCCTTCGCACTCCAAACATTCCTCCCCTCCCTC
GCCAGTAGTGTCATTCCCGTGACCACCCTCTTCTCCTTCCTCACCGGCAG
CTACCTTGCGGCCATCAATCCCGTAGGATGGTTCATCACGACCCTTGTCT
TCTTCTGGTTTTTTTTCCCTTACTGGCTGCCCACCATGCAACGTCTTTCT
GACCGCGCCCTGGTCAACACCGTCACCTGGGGCTTCTGGCTACAGCTTCT
CCTCATTCAGGGTATCTATTCGCTCATGCCTCTTATCACGGACATCCGGC
CCTTTGGGACTGCCACCACCAATCCTCTCTCTCGCTTTCCCTTGTTCTTG
ATGGGCATGGCGGCGGGCGTGTTAACTCTGAGGTACCCCGTGGTTGGAGG
AGGTAGGGTGGGAAGGACGGCAGATAGAGACGAGCACAGTAGTAGTAGTG
GTAGTAGTAGCAGCAGCAGATGCAGCAGGAGCGTTGAAGGGAAAAAGGAG
GATTGTTTGCCTCGGCACACCAACAGCAAGCAGCTGCAAATGCGTATTCT
AAATGGAGCAGGTGCAGCCACAGAAGGTGGAGGAGTACTCGGGGAAGGAG
GGCGGGAAGGAGGAGTGAAAGAAGACGAGTCCACCGTAGAGGTAATAGCA
GTGGAGGAAATGGAAGAACAAGGAGCGAATGCATCGATGCCCTGGCCCGC
ATGCATTTTCGGCCTGCCCTTGCCCGTGTGCCTCACATCTCGCCGGAACA
GCAGTAGCGCTAGTTGCACAACCACAACGGTCCCCACTGCGGCGAAAATG
GCATTTTTCATCCCCCCTCATTCTCCGCGGACCCAGTCAGAGTGGGCTCG
CCTCGCCACGCAACAGTCCCTGGCCCTTCTTTTCCTCACCTTACTCATTT
CCGGCATCGACACCGGTGTTCGCGTTCTCTCACAAGGCCAACACACCATC
AGTGCCCAGGTCTGGTTCCAGGGGTTGGTCGCCATGACTCAGCTGAACGT
CTTCCTAGCCCTCACTCGGGACGGAAATCTCTCCCTGGCATCCCGTTTCC
TTCGCCTGCCTTTCTGCAAGTGGATCGGGCGCATTTCGATGAATATCTAC
TTGATCCATTATCCTCTCCTTGGCTATCTGGCCCTGGGGTTACACTTTCC
CCAATCCAAGGACCTCCTAAACTGCTATAATCTAGGGAGTGGCGGGGTGG
AGGATATGACAGAGCGAGAGGCTTTACGAGTGACCGAGTGTCAGACCTTA
ATCAAAGATGTGAGAGAGTTGCCGTGGTGGAGTGTGTTTGTGATCTTGCC
TTTGGCTGCGCTGCTTGGGGAAGCACTGGCACGTTGGGTGGAGGAGCCGG
CAAGGCGCGCGTTGAGGCACCGGAAGGGGTAGTCCCACAGAAAAAGAGGA
GATGTTGAGACTGGTAAGAATTGTTTGAGAGAATCAAACAAACAAGATCA
GAAAAAAGAGTGTGGTAGCA back to topprotein sequence of NO07G00280.1 >NO07G00280.1-protein ID=NO07G00280.1-protein|Name=NO07G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bp
MVATMWAPFSAAKSGKGVDIMDRSNPSDIIHAKEDSVAVQKPNHQLSPPP
PTQVDMQAHVGLRGVAAVWIVVFHCLGDPKYHSGWVVALQGSSLMPLFFM
LSGFSLTVTYGRTMWASSSSSCLSCFSRRRQPDINKSIAKDVVHTDIELV
EEGKRLSSRPVGCSSQPSPSPASKRPPSPSSFSARSLPPFDTRAFYQNRI
ARVMPVYWLSILVSIPLWLLNIGDFPFALQTFLPSLASSVIPVTTLFSFL
TGSYLAAINPVGWFITTLVFFWFFFPYWLPTMQRLSDRALVNTVTWGFWL
QLLLIQGIYSLMPLITDIRPFGTATTNPLSRFPLFLMGMAAGVLTLRYPV
VGGGRVGRTADRDEHSSSSGSSSSSRCSRSVEGKKEDCLPRHTNSKQLQM
RILNGAGAATEGGGVLGEGGREGGVKEDESTVEVIAVEEMEEQGANASMP
WPACIFGLPLPVCLTSRRNSSSASCTTTTVPTAAKMAFFIPPHSPRTQSE
WARLATQQSLALLFLTLLISGIDTGVRVLSQGQHTISAQVWFQGLVAMTQ
LNVFLALTRDGNLSLASRFLRLPFCKWIGRISMNIYLIHYPLLGYLALGL
HFPQSKDLLNCYNLGSGGVEDMTEREALRVTECQTLIKDVRELPWWSVFV
ILPLAALLGEALARWVEEPARRALRHRKG* back to topmRNA from alignment at chr7:111275..113444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G00280.1 ID=NO07G00280.1|Name=NO07G00280.1|organism=Nannochloropsis oceanica|type=mRNA|length=2170bp|location=Sequence derived from alignment at chr7:111275..113444- (Nannochloropsis oceanica)
GCACACGGATAAGAAGAGGCGGCTGGGGAGCTGCACAACGCGATGGTAGC
TACGATGTGGGCACCCTTCTCCGCTGCCAAATCAGGGAAGGGGGTCGATA
TTATGGACAGAAGCAACCCCAGTGATATAATCCACGCAAAGGAAGACTCT
GTTGCCGTCCAAAAACCCAACCATCAACTATCACCACCTCCGCCGACTCA
AGTGGACATGCAGGCACATGTTGGCCTCCGCGGAGTCGCTGCCGTCTGGA
TCGTAGTCTTTCACTGCCTCGGTGACCCTAAGTACCATTCTGGATGGGTA
GTGGCCTTGCAAGGCTCTAGCTTGATGCCACTCTTCTTCATGCTCTCGGG
CTTCTCCTTGACCGTAACCTATGGCCGGACGATGTGGGCGTCTTCGTCGT
CGTCTTGTTTGTCTTGTTTCAGCCGACGTCGTCAACCAGACATCAACAAA
AGCATAGCTAAAGATGTTGTACATACTGATATTGAACTAGTGGAGGAAGG
AAAGCGCCTTTCTTCCAGGCCCGTCGGCTGCTCTTCTCAGCCATCCCCCT
CGCCCGCCTCGAAACGGCCGCCCTCTCCGTCCTCCTTCTCCGCTCGCTCC
CTCCCGCCCTTTGACACCCGCGCGTTCTATCAGAACCGCATTGCGCGTGT
AATGCCCGTATATTGGCTATCCATACTCGTCTCCATCCCTCTCTGGCTCC
TAAATATAGGCGACTTCCCCTTCGCACTCCAAACATTCCTCCCCTCCCTC
GCCAGTAGTGTCATTCCCGTGACCACCCTCTTCTCCTTCCTCACCGGCAG
CTACCTTGCGGCCATCAATCCCGTAGGATGGTTCATCACGACCCTTGTCT
TCTTCTGGTTTTTTTTCCCTTACTGGCTGCCCACCATGCAACGTCTTTCT
GACCGCGCCCTGGTCAACACCGTCACCTGGGGCTTCTGGCTACAGCTTCT
CCTCATTCAGGGTATCTATTCGCTCATGCCTCTTATCACGGACATCCGGC
CCTTTGGGACTGCCACCACCAATCCTCTCTCTCGCTTTCCCTTGTTCTTG
ATGGGCATGGCGGCGGGCGTGTTAACTCTGAGGTACCCCGTGGTTGGAGG
AGGTAGGGTGGGAAGGACGGCAGATAGAGACGAGCACAGTAGTAGTAGTG
GTAGTAGTAGCAGCAGCAGATGCAGCAGGAGCGTTGAAGGGAAAAAGGAG
GATTGTTTGCCTCGGCACACCAACAGCAAGCAGCTGCAAATGCGTATTCT
AAATGGAGCAGGTGCAGCCACAGAAGGTGGAGGAGTACTCGGGGAAGGAG
GGCGGGAAGGAGGAGTGAAAGAAGACGAGTCCACCGTAGAGGTAATAGCA
GTGGAGGAAATGGAAGAACAAGGAGCGAATGCATCGATGCCCTGGCCCGC
ATGCATTTTCGGCCTGCCCTTGCCCGTGTGCCTCACATCTCGCCGGAACA
GCAGTAGCGCTAGTTGCACAACCACAACGGTCCCCACTGCGGCGAAAATG
GCATTTTTCATCCCCCCTCATTCTCCGCGGACCCAGTCAGAGTGGGCTCG
CCTCGCCACGCAACAGTCCCTGGCCCTTCTTTTCCTCACCTTACTCATTT
CCGGCATCGACACCGGTGTTCGCGTTCTCTCACAAGGCCAACACACCATC
AGTGCCCAGGTCTGGTTCCAGGGGTTGGTCGCCATGACTCAGCTGAACGT
CTTCCTAGCCCTCACTCGGGACGGAAATCTCTCCCTGGCATCCCGTTTCC
TTCGCCTGCCTTTCTGCAAGTGGATCGGGCGCATTTCGATGAATATCTAC
TTGATCCATTATCCTCTCCTTGGCTATCTGGCCCTGGGGTTACACTTTCC
CCAATCCAAGGACCTCCTAAACTGCTATAATCTAGGGAGTGGCGGGGTGG
AGGATATGACAGAGCGAGAGGCTTTACGAGTGACCGAGTGTCAGACCTTA
ATCAAAGATGTGAGAGAGTTGCCGTGGTGGAGTGTGTTTGTGATCTTGCC
TTTGGCTGCGCTGCTTGGGGAAGCACTGGCACGTTGGGTGGAGGAGCCGG
CAAGGCGCGCGTTGAGGCACCGGAAGGGGTAGTCCCACAGAAAAAGAGGA
GATGTTGAGACTGGTAAGAATTGTTTGAGAGAATCAAACAAACAAGATCA
GAAAAAAGAGTGTGGTAGCA back to topCoding sequence (CDS) from alignment at chr7:111275..113444- >NO07G00280.1 ID=NO07G00280.1|Name=NO07G00280.1|organism=Nannochloropsis oceanica|type=CDS|length=2040bp|location=Sequence derived from alignment at chr7:111275..113444- (Nannochloropsis oceanica)
ATGGTAGCTACGATGTGGGCACCCTTCTCCGCTGCCAAATCAGGGAAGGG
GGTCGATATTATGGACAGAAGCAACCCCAGTGATATAATCCACGCAAAGG
AAGACTCTGTTGCCGTCCAAAAACCCAACCATCAACTATCACCACCTCCG
CCGACTCAAGTGGACATGCAGGCACATGTTGGCCTCCGCGGAGTCGCTGC
CGTCTGGATCGTAGTCTTTCACTGCCTCGGTGACCCTAAGTACCATTCTG
GATGGGTAGTGGCCTTGCAAGGCTCTAGCTTGATGCCACTCTTCTTCATG
CTCTCGGGCTTCTCCTTGACCGTAACCTATGGCCGGACGATGTGGGCGTC
TTCGTCGTCGTCTTGTTTGTCTTGTTTCAGCCGACGTCGTCAACCAGACA
TCAACAAAAGCATAGCTAAAGATGTTGTACATACTGATATTGAACTAGTG
GAGGAAGGAAAGCGCCTTTCTTCCAGGCCCGTCGGCTGCTCTTCTCAGCC
ATCCCCCTCGCCCGCCTCGAAACGGCCGCCCTCTCCGTCCTCCTTCTCCG
CTCGCTCCCTCCCGCCCTTTGACACCCGCGCGTTCTATCAGAACCGCATT
GCGCGTGTAATGCCCGTATATTGGCTATCCATACTCGTCTCCATCCCTCT
CTGGCTCCTAAATATAGGCGACTTCCCCTTCGCACTCCAAACATTCCTCC
CCTCCCTCGCCAGTAGTGTCATTCCCGTGACCACCCTCTTCTCCTTCCTC
ACCGGCAGCTACCTTGCGGCCATCAATCCCGTAGGATGGTTCATCACGAC
CCTTGTCTTCTTCTGGTTTTTTTTCCCTTACTGGCTGCCCACCATGCAAC
GTCTTTCTGACCGCGCCCTGGTCAACACCGTCACCTGGGGCTTCTGGCTA
CAGCTTCTCCTCATTCAGGGTATCTATTCGCTCATGCCTCTTATCACGGA
CATCCGGCCCTTTGGGACTGCCACCACCAATCCTCTCTCTCGCTTTCCCT
TGTTCTTGATGGGCATGGCGGCGGGCGTGTTAACTCTGAGGTACCCCGTG
GTTGGAGGAGGTAGGGTGGGAAGGACGGCAGATAGAGACGAGCACAGTAG
TAGTAGTGGTAGTAGTAGCAGCAGCAGATGCAGCAGGAGCGTTGAAGGGA
AAAAGGAGGATTGTTTGCCTCGGCACACCAACAGCAAGCAGCTGCAAATG
CGTATTCTAAATGGAGCAGGTGCAGCCACAGAAGGTGGAGGAGTACTCGG
GGAAGGAGGGCGGGAAGGAGGAGTGAAAGAAGACGAGTCCACCGTAGAGG
TAATAGCAGTGGAGGAAATGGAAGAACAAGGAGCGAATGCATCGATGCCC
TGGCCCGCATGCATTTTCGGCCTGCCCTTGCCCGTGTGCCTCACATCTCG
CCGGAACAGCAGTAGCGCTAGTTGCACAACCACAACGGTCCCCACTGCGG
CGAAAATGGCATTTTTCATCCCCCCTCATTCTCCGCGGACCCAGTCAGAG
TGGGCTCGCCTCGCCACGCAACAGTCCCTGGCCCTTCTTTTCCTCACCTT
ACTCATTTCCGGCATCGACACCGGTGTTCGCGTTCTCTCACAAGGCCAAC
ACACCATCAGTGCCCAGGTCTGGTTCCAGGGGTTGGTCGCCATGACTCAG
CTGAACGTCTTCCTAGCCCTCACTCGGGACGGAAATCTCTCCCTGGCATC
CCGTTTCCTTCGCCTGCCTTTCTGCAAGTGGATCGGGCGCATTTCGATGA
ATATCTACTTGATCCATTATCCTCTCCTTGGCTATCTGGCCCTGGGGTTA
CACTTTCCCCAATCCAAGGACCTCCTAAACTGCTATAATCTAGGGAGTGG
CGGGGTGGAGGATATGACAGAGCGAGAGGCTTTACGAGTGACCGAGTGTC
AGACCTTAATCAAAGATGTGAGAGAGTTGCCGTGGTGGAGTGTGTTTGTG
ATCTTGCCTTTGGCTGCGCTGCTTGGGGAAGCACTGGCACGTTGGGTGGA
GGAGCCGGCAAGGCGCGCGTTGAGGCACCGGAAGGGGTAG back to top
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