NO07G00130, NO07G00130 (gene) Nannochloropsis oceanica

Overview
NameNO07G00130
Unique NameNO07G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3380
Alignment locationchr7:45805..49440 -

Link to JBrowse

Properties
Property NameValue
DescriptionEsterase, SGNH hydrolase-type
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:45805..49440 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G00130 vs. NCBI_GenBank
Match: EWM27392.1 (Esterase, SGNH hydrolase-type [Nannochloropsis gaditana])

HSP 1 Score: 570.1 bits (1468), Expect = 9.500e-159
Identity = 299/468 (63.89%), Postives = 335/468 (71.58%), Query Frame = 0
Query:    4 SQRYQGLGSANSGLQSQGPQRASTACRLATLGCVASTIILGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIQNKCAAAAKALRQRSGWDYMRVMRKGQASKDSVAHLGSLARLAGAIQKANDEKRPLKIAVLGGSFSAGGAVADMEDSYPEVLASLLAGRDTDSGEGPVPPSPILFGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEQPERVPDVWVVEFGENFDSTLDQYEALLAMLLLDHARFRSPAVLTVAVAKNFCWWSDGPIRAAQCGLQRTWGWLKAAAKTMDVPLISFVHGVAPWVDYVPPAWALEGGEEEEGEGRGEGGARTLPGLLLGNGSELHKSEFPGLYEKLDRVGKQLYANCGENQHFNEYGHRLLGNFLYSLFGEAAREGVGEEXXXXXXXXXXGAVRARLSTTALEVFERVSSGSSGHTVSCNLTLTQGR 472
            + RY+GLGSANSGLQS GPQR S ACR+AT  C+A   + GL                                                  ET Q KCAAA+K LRQR GWDYMRVMR GQAS DSV H G+L RL  AI +AN E+RPLKIAVLGGSFSAGGAVADMEDS+PEVLASLLAG++ D G+GP+P +P+ +GAEIVNMAQGGAGFMLPLFCTMKVYSLVAE PE+VPDVW+VEFGENFDS+++QYEALLAMLL DH RF   AVLT AVAKNFCWWSDGPIRA+QCGLQRTW WL+  A+ M VPL+SFVHGVAPWV+Y PPAW     E   GEG      RTLPGLLLGN SEL K E+PGLY+KLDRV KQLYA+CGENQHFNEYGHRLLG+FLY +F EA R G  EE            +  RLS  A+EVF RVSSGS G+T+SCNLTLTQ R
Sbjct:    2 NNRYRGLGSANSGLQSHGPQRFSLACRIATWTCIAGMGVFGL-----------LLFRFSSYSTSPFTLLPPHSISSPPSSTAAPNFAPASSPETFQAKCAAASKLLRQRGGWDYMRVMRGGQASVDSVVHQGNLNRLHKAIARANAEERPLKIAVLGGSFSAGGAVADMEDSFPEVLASLLAGKEEDGGDGPIPSTPVQYGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEAPEQVPDVWIVEFGENFDSSVEQYEALLAMLLFDHNRFGQAAVLTAAVAKNFCWWSDGPIRASQCGLQRTWVWLEGVAQRMAVPLVSFVHGVAPWVNYRPPAWV----ESVGGEGGARDRGRTLPGLLLGNTSELSKQEYPGLYDKLDRVEKQLYADCGENQHFNEYGHRLLGHFLYGVFVEAGRNGGREESEE--------EIMTRLSPQAVEVFHRVSSGSEGYTLSCNLTLTQVR 446          
The following BLAST results are available for this feature:
BLAST of NO07G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27392.19.500e-15963.89Esterase, SGNH hydrolase-type [Nannochloropsis gad... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL098nonsL098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR136ngnoR136Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000908NSK000908Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00130.2NO07G00130.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G00130.1NO07G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100185g7gene3167Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00130.2NO07G00130.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G00130.1NO07G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00130 ID=NO07G00130|Name=NO07G00130|organism=Nannochloropsis oceanica|type=gene|length=3380bp
ATGAGCAATTCCCAGCGCTACCAGGGCTTGGGTTCGGCCAATAGCGGGCT
GCAATCCCAGGGACCGCAACGCGCGTCCACAGCGTGCCGGCTCGCAACAT
TAGGTTGTGTCGCCAGCACGATCATCCTTGGCCTCTTCTTCTTCCGCTTC
CCTTTCCCATCCTCCTCGTTTCCGCCTCATCCCACGCCATTCCCCTCGCC
ATCGCCTTCGCCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTT
CCACCACAGGACTCGCCGTCCCCAACCCCCTCCCCGAGACGATCCAAAAC
AAATGCGCGGCAGCCGCCAAAGCCCTGCGTCAACGGTCCGGGTGGGACTA
TATGCGTGTAATGCGAAAAGGCCAAGCCAGCAAAGACAGTGTCGCCCACC
TCGGGAGCCTGGCCCGACTCGCGGGAGCCATCCAAAAAGCCAACGACGAG
AAACGTCCCCTTAAAATAGCCGTGCTGGGAGGTTCGTTTTCCGCTGGTGG
TGCCGTGGCAGACATGGAGGATTCCTACCCCGAGGTCCTCGCCTCCCTCC
TGGCGGGGCGAGACACGGACAGTGGGGAGGGGCCCGTACCTCCCTCCCCC
ATCTTGTTTGGGGCGGAGATTGTGAATATGGCGCAGGGAGGGGCAGGATT
TATGCTGCCCTTGTTCTGCACGATGAAGGTGTATTCGCTAGTGGCTGAGC
AGCCGGAGCGGGTGCCTGATGTGTGGGTGGTGGAATTTGGGGAGAACTTT
GACTCGACGCTGGACCAGTACGAGgtgcgtgcgtgcggctagaggtgggg
cttgaagaggaaagaggagtgtgtatgtgtgttggcttgttgaagtgttg
ttctgaatgggggaaaatgctgggttggcttgggctgggcatgggcaggg
gggcactgggggagtggaaggaggaacggaagaagcgctccaggctccga
gtctatttctttcccgatatcccttctttgtgtgataaaggggatcgaaa
aacctatgtacttgcattcttttttatgttcctcacttactgcgtatgta
tgcatgtagcgccttttctctttccttcgcccacgcattcctccctccct
ccctcccgcccaccctccctcctccccaccctccctccttcagGCCCTGC
TTGCCATGCTCCTACTCGACCACGCCCGATTTAGGAGCCCCGCCGTGCTG
ACCGTCGCAGTGGCCAAGAACTTCTGCTGGTGGTCCGACGGGCCCATAAG
GGCGGCTCAGTGCGGCCTCCAACGCACTTGGGGATGGTTGAAAGCGGCTG
CGAAGACGATGGACGTCCCCTTGATCTCGTTCGTGCACGGCGTGGCACCT
TGGGTGGACTATGTGCCGCCGGCGTGGGCTCTTGAAGGAGGGGAGGAGGA
GGAGGGGGAGGGCAGGGGGGAGGGAGGGGCGAGGACGTTGCCGGGCTTGC
TGTTGGGGAATGGGAGTGAGCTTCACAAGTCGGAGTTTCCCGGGTTGTAC
GAGAAGCTGGATAGGGTCGGAAAGCAGCTGTATGCGAACTGTGGGGAGAA
CCAGCACTTTAACGAGTACGGGCACCGGCTGCTAGGCAACTTTCTGTACA
GCCTGTTCGGGGAGGCGGCCAGGGAGGGCGTGGGGGAGGAGAGGGAGGAG
GAGGAGAGGAGGAAGGAGGAGGGGGCGGTGAGGGCGCGGCTGTCGACGAC
TGCGTTGGAGGTGTTTGAGAGGGTCTCGAGTGGCTCGAGCGGGCATACGG
TGTCGTGCAACCTAACCTTAACGCAGgtaaggaggaaggaaggaagggag
ggagggagggagggagggagggagggagggagggagggagggcgggcata
gcataatctattcctccttacgaatcaaacactcacctcatctcacctcc
ctccctcttgccctcccttcctcagGGCCGCGCCTTGGACTTGGTGCCTG
TCGCTCGATCGAACTACACCCTCTGGACGGAGAAGGCCGAGGGGAGCAGT
GATATCTTCAGTGGGGGAAAGAAGAAGCGATCGGACCGGAAGCAGACCTG
GTCGCCACTGAGTGAGAATGCCACGCTCGACTTCGATTCCATCGTACCGA
TAGGGGTGAGGGAGGGAGGGAAGGAGGGAGGAAGGGAATGATAGGGAAGG
CGGTTGGGTTTCTTAGGTTACGGTAAAACGACGATCTTTAGACAACAATA
TTTTCTCCTTCGTCTATACGAAACCTCTCCTTCCACCCTTCCCTCTCTCT
TCCCTTCCCATTAGGCGAGCACGTTGTGCGTGTTGATGTACGGGAGCCAA
GGCATGTACCTGAATGCCTCTTTCCCAGAATATCCTACCCGGATGGTGGA
AGAGGTGGTGGAAGAAGAGGTAGAGGAGGATGAGGAGGGGGGCAGCGGGG
AGGGAGGGAAAGACGGAGGGATGGTCCACGAGAAGGAGAGGGAGAGAGGG
GAAGACGGCTTGTGTCGGCAGGTGCAGCCGAACGGAAAAATCAAGGTGGT
AATGTGTGACAGCAGCAGCAATAATAGCAGCAGCAAGAGGAACAAAAAGA
AGGAAAATGACGCTTCCACTCCCTCCACCACCTCCCTCCGTGCTGGTCCC
AGCATAAGGAGTGGCAAACCCACCGGCAGCGTCATCACGGGAGAAGCAGC
AGCGTCACCACTAAAGAAGAAGGGAACGACCAAGACAAGGCTGGTGGCCC
AAAAGCGCCCGGATGGGTCGCCCTACCTCCTCCTTACTGACAGCACCTGC
GAGTACCGTGGGGGGTAGACTGGACCATCTACTCTGTCTATAAAATTGAC
TGTGGCTGCTCCTTGCCCCAAGCCATGGCGGACGGGAAGATGCACCGCAT
CCAACTGAAGAATACCAGGGGGAAAGTGCAGGTGGCAGGCTTGGTTATTT
GGTAATAATTAAGACAAAGAAAGATAGAGGGACAGAGGGAGCCGGATTGG
AGACAGCCTGGTATTCGATAGTATTCGATGGATTCATCTGATTAAAGAGG
AACATTTAGAAATGGGAAGAAGAGCGACTATGGGTTTTTGATTGTAATAC
GTGTGTGTATGTGTGTTTGACTCTTGCTCTTCGAAAGAAGGGCGGACCTT
CTATAGGTAGTATGCTGTGTTTGACAGCTACACAAGGCCAGAAAGTAAAG
AGCCAGGAGAAGAAGTGGCATGCGATGGGCATACGAATGTTATTAAAATA
AATAAATGCGAGTGTACAGAAAAATGGGGGCATGGTGAGCACGGGCACTA
ATGAAATAGCAACACAACGACGGTTTATGACTGGCGTAGTGTGCAGAGTT
GGAGCGGGATGAGAAGACATGATGCGGCCCATGGTGGCAATAAGTCCTTT
TTTGAAATAACAATATGTTTTGCACAGGAG
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protein sequence of NO07G00130.2

>NO07G00130.2-protein ID=NO07G00130.2-protein|Name=NO07G00130.2|organism=Nannochloropsis oceanica|type=polypeptide|length=697bp
MSNSQRYQGLGSANSGLQSQGPQRASTACRLATLGCVASTIILGLFFFRF
PFPSSSFPPHPTPFPSPSPSPSSSSSTSSSSSSSTTGLAVPNPLPETIQN
KCAAAAKALRQRSGWDYMRVMRKGQASKDSVAHLGSLARLAGAIQKANDE
KRPLKIAVLGGSFSAGGAVADMEDSYPEVLASLLAGRDTDSGEGPVPPSP
ILFGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEQPERVPDVWVVEFGENF
DSTLDQYEALLAMLLLDHARFRSPAVLTVAVAKNFCWWSDGPIRAAQCGL
QRTWGWLKAAAKTMDVPLISFVHGVAPWVDYVPPAWALEGGEEEEGEGRG
EGGARTLPGLLLGNGSELHKSEFPGLYEKLDRVGKQLYANCGENQHFNEY
GHRLLGNFLYSLFGEAAREGVGEEREEEERRKEEGAVRARLSTTALEVFE
RVSSGSSGHTVSCNLTLTQGRALDLVPVARSNYTLWTEKAEGSSDIFSGG
KKKRSDRKQTWSPLSENATLDFDSIVPIGASTLCVLMYGSQGMYLNASFP
EYPTRMVEEVVEEEVEEDEEGGSGEGGKDGGMVHEKERERGEDGLCRQVQ
PNGKIKVVMCDSSSNNSSSKRNKKKENDASTPSTTSLRAGPSIRSGKPTG
SVITGEAAASPLKKKGTTKTRLVAQKRPDGSPYLLLTDSTCEYRGG*
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protein sequence of NO07G00130.1

>NO07G00130.1-protein ID=NO07G00130.1-protein|Name=NO07G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MSNSQRYQGLGSANSGLQSQGPQRASTACRLATLGCVASTIILGLFFFRF
PFPSSSFPPHPTPFPSPSPSPSSSSSTSSSSSSSTTGLAVPNPLPETIQN
KCAAAAKALRQRSGWDYMRVMRKGQASKDSVAHLGSLARLAGAIQKANDE
KRPLKIAVLGGSFSAGGAVADMEDSYPEVLASLLAGRDTDSGEGPVPPSP
ILFGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEQPERVPDVWVVEFGENF
DSTLDQYEALLAMLLLDHARFRSPAVLTVAVAKNFCWWSDGPIRAAQCGL
QRTWGWLKAAAKTMDVPLISFVHGVAPWVDYVPPAWALEGGEEEEGEGRG
EGGARTLPGLLLGNGSELHKSEFPGLYEKLDRVGKQLYANCGENQHFNEY
GHRLLGNFLYSLFGEAAREGVGEEREEEERRKEEGAVRARLSTTALEVFE
RVSSGSSGHTVSCNLTLTQGRALDLVPVARSNYTLWTEKAEGSSDIFSGG
KKKRSDRKQTWSPLSENATLDFDSIVPIGVREGGKEGGRE*
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Synonyms
Publications