|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:45805..49184 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G00130.1 vs.
Match: EWM27392.1 (Esterase, SGNH hydrolase-type [Nannochloropsis gaditana]) HSP 1 Score: 594.0 bits (1530), Expect = 4.800e-166 Identity = 318/472 (67.37%), Postives = 361/472 (76.48%), Query Frame = 0
Query: 4 SQRYQGLGSANSGLQSQGPQRASTACRLATLGCVASTIILGLFFFRFPFPSSS----FPPHPTPFPSPSPSPSSSSSTSSSSSSSTTGLAVPNPLPETIQNKCAAAAKALRQRSGWDYMRVMRKGQASKDSVAHLGSLARLAGAIQKANDEKRPLKIAVLGGSFSAGGAVADMEDSYPEVLASLLAGRDTDSGEGPVPPSPILFGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEQPERVPDVWVVEFGENFDSTLDQYEALLAMLLLDHARFRSPAVLTVAVAKNFCWWSDGPIRAAQCGLQRTWGWLKAAAKTMDVPLISFVHGVAPWVDYVPPAWALEGGEEEEGEGRGEGGARTLPGLLLGNGSELHKSEFPGLYEKLDRVGKQLYANCGENQHFNEYGHRLLGNFLYSLFGEAAREGVGEEREEEERRKEEGAVRARLSTTALEVFERVSSGSSGHTVSCNLTLTQGR 472
+ RY+GLGSANSGLQS GPQR S ACR+AT C+A + GL FRF S+S PPH S S PSS+++ + + +SS PET Q KCAAA+K LRQR GWDYMRVMR GQAS DSV H G+L RL AI +AN E+RPLKIAVLGGSFSAGGAVADMEDS+PEVLASLLAG++ D G+GP+P +P+ +GAEIVNMAQGGAGFMLPLFCTMKVYSLVAE PE+VPDVW+VEFGENFDS+++QYEALLAMLL DH RF AVLT AVAKNFCWWSDGPIRA+QCGLQRTW WL+ A+ M VPL+SFVHGVAPWV+Y PPAW E GEG RTLPGLLLGN SEL K E+PGLY+KLDRV KQLYA+CGENQHFNEYGHRLLG+FLY +F EA R G EE EEE + RLS A+EVF RVSSGS G+T+SCNLTLTQ R
Sbjct: 2 NNRYRGLGSANSGLQSHGPQRFSLACRIATWTCIAGMGVFGLLLFRFSSYSTSPFTLLPPH-----SISSPPSSTAAPNFAPASS----------PETFQAKCAAASKLLRQRGGWDYMRVMRGGQASVDSVVHQGNLNRLHKAIARANAEERPLKIAVLGGSFSAGGAVADMEDSFPEVLASLLAGKEEDGGDGPIPSTPVQYGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEAPEQVPDVWIVEFGENFDSSVEQYEALLAMLLFDHNRFGQAAVLTAAVAKNFCWWSDGPIRASQCGLQRTWVWLEGVAQRMAVPLVSFVHGVAPWVNYRPPAWV----ESVGGEGGARDRGRTLPGLLLGNTSELSKQEYPGLYDKLDRVEKQLYADCGENQHFNEYGHRLLGHFLYGVFVEAGRNGGREESEEE--------IMTRLSPQAVEVFHRVSSGSEGYTLSCNLTLTQVR 446
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G00130.1 ID=NO07G00130.1|Name=NO07G00130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2862bp ATGAGCAATTCCCAGCGCTACCAGGGCTTGGGTTCGGCCAATAGCGGGCT GCAATCCCAGGGACCGCAACGCGCGTCCACAGCGTGCCGGCTCGCAACAT TAGGTTGTGTCGCCAGCACGATCATCCTTGGCCTCTTCTTCTTCCGCTTC CCTTTCCCATCCTCCTCGTTTCCGCCTCATCCCACGCCATTCCCCTCGCC ATCGCCTTCGCCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTT CCACCACAGGACTCGCCGTCCCCAACCCCCTCCCCGAGACGATCCAAAAC AAATGCGCGGCAGCCGCCAAAGCCCTGCGTCAACGGTCCGGGTGGGACTA TATGCGTGTAATGCGAAAAGGCCAAGCCAGCAAAGACAGTGTCGCCCACC TCGGGAGCCTGGCCCGACTCGCGGGAGCCATCCAAAAAGCCAACGACGAG AAACGTCCCCTTAAAATAGCCGTGCTGGGAGGTTCGTTTTCCGCTGGTGG TGCCGTGGCAGACATGGAGGATTCCTACCCCGAGGTCCTCGCCTCCCTCC TGGCGGGGCGAGACACGGACAGTGGGGAGGGGCCCGTACCTCCCTCCCCC ATCTTGTTTGGGGCGGAGATTGTGAATATGGCGCAGGGAGGGGCAGGATT TATGCTGCCCTTGTTCTGCACGATGAAGGTGTATTCGCTAGTGGCTGAGC AGCCGGAGCGGGTGCCTGATGTGTGGGTGGTGGAATTTGGGGAGAACTTT GACTCGACGCTGGACCAGTACGAGGCCCTGCTTGCCATGCTCCTACTCGA CCACGCCCGATTTAGGAGCCCCGCCGTGCTGACCGTCGCAGTGGCCAAGA ACTTCTGCTGGTGGTCCGACGGGCCCATAAGGGCGGCTCAGTGCGGCCTC CAACGCACTTGGGGATGGTTGAAAGCGGCTGCGAAGACGATGGACGTCCC CTTGATCTCGTTCGTGCACGGCGTGGCACCTTGGGTGGACTATGTGCCGC CGGCGTGGGCTCTTGAAGGAGGGGAGGAGGAGGAGGGGGAGGGCAGGGGG GAGGGAGGGGCGAGGACGTTGCCGGGCTTGCTGTTGGGGAATGGGAGTGA GCTTCACAAGTCGGAGTTTCCCGGGTTGTACGAGAAGCTGGATAGGGTCG GAAAGCAGCTGTATGCGAACTGTGGGGAGAACCAGCACTTTAACGAGTAC GGGCACCGGCTGCTAGGCAACTTTCTGTACAGCCTGTTCGGGGAGGCGGC CAGGGAGGGCGTGGGGGAGGAGAGGGAGGAGGAGGAGAGGAGGAAGGAGG AGGGGGCGGTGAGGGCGCGGCTGTCGACGACTGCGTTGGAGGTGTTTGAG AGGGTCTCGAGTGGCTCGAGCGGGCATACGGTGTCGTGCAACCTAACCTT AACGCAGGGCCGCGCCTTGGACTTGGTGCCTGTCGCTCGATCGAACTACA CCCTCTGGACGGAGAAGGCCGAGGGGAGCAGTGATATCTTCAGTGGGGGA AAGAAGAAGCGATCGGACCGGAAGCAGACCTGGTCGCCACTGAGTGAGAA TGCCACGCTCGACTTCGATTCCATCGTACCGATAGGGGTGAGGGAGGGAG GGAAGGAGGGAGGAAGGGAATGATAGGGAAGGCGGTTGGGTTTCTTAGGT TACGGTAAAACGACGATCTTTAGACAACAATATTTTCTCCTTCGTCTATA CGAAACCTCTCCTTCCACCCTTCCCTCTCTCTTCCCTTCCCATTAGGCGA GCACGTTGTGCGTGTTGATGTACGGGAGCCAAGGCATGTACCTGAATGCC TCTTTCCCAGAATATCCTACCCGGATGGTGGAAGAGGTGGTGGAAGAAGA GGTAGAGGAGGATGAGGAGGGGGGCAGCGGGGAGGGAGGGAAAGACGGAG GGATGGTCCACGAGAAGGAGAGGGAGAGAGGGGAAGACGGCTTGTGTCGG CAGGTGCAGCCGAACGGAAAAATCAAGGTGGTAATGTGTGACAGCAGCAG CAATAATAGCAGCAGCAAGAGGAACAAAAAGAAGGAAAATGACGCTTCCA CTCCCTCCACCACCTCCCTCCGTGCTGGTCCCAGCATAAGGAGTGGCAAA CCCACCGGCAGCGTCATCACGGGAGAAGCAGCAGCGTCACCACTAAAGAA GAAGGGAACGACCAAGACAAGGCTGGTGGCCCAAAAGCGCCCGGATGGGT CGCCCTACCTCCTCCTTACTGACAGCACCTGCGAGTACCGTGGGGGGTAG ACTGGACCATCTACTCTGTCTATAAAATTGACTGTGGCTGCTCCTTGCCC CAAGCCATGGCGGACGGGAAGATGCACCGCATCCAACTGAAGAATACCAG GGGGAAAGTGCAGGTGGCAGGCTTGGTTATTTGGTAATAATTAAGACAAA GAAAGATAGAGGGACAGAGGGAGCCGGATTGGAGACAGCCTGGTATTCGA TAGTATTCGATGGATTCATCTGATTAAAGAGGAACATTTAGAAATGGGAA GAAGAGCGACTATGGGTTTTTGATTGTAATACGTGTGTGTATGTGTGTTT GACTCTTGCTCTTCGAAAGAAGGGCGGACCTTCTATAGGTAGTATGCTGT GTTTGACAGCTACACAAGGCCAGAAAGTAAAGAGCCAGGAGAAGAAGTGG CATGCGATGGGCATACGAATGTTATTAAAATAAATAAATGCGAGTGTACA GAAAAATGGGGGCATGGTGAGCACGGGCACTAATGAAATAGCAACACAAC GACGGTTTATGACTGGCGTAGTGTGCAGAGTTGGAGCGGGATGAGAAGAC ATGATGCGGCCCATGGTGGCAATAAGTCCTTTTTTGAAATAACAATATGT TTTGCACAGGAG back to topprotein sequence of NO07G00130.1 >NO07G00130.1-protein ID=NO07G00130.1-protein|Name=NO07G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp MSNSQRYQGLGSANSGLQSQGPQRASTACRLATLGCVASTIILGLFFFRF PFPSSSFPPHPTPFPSPSPSPSSSSSTSSSSSSSTTGLAVPNPLPETIQN KCAAAAKALRQRSGWDYMRVMRKGQASKDSVAHLGSLARLAGAIQKANDE KRPLKIAVLGGSFSAGGAVADMEDSYPEVLASLLAGRDTDSGEGPVPPSP ILFGAEIVNMAQGGAGFMLPLFCTMKVYSLVAEQPERVPDVWVVEFGENF DSTLDQYEALLAMLLLDHARFRSPAVLTVAVAKNFCWWSDGPIRAAQCGL QRTWGWLKAAAKTMDVPLISFVHGVAPWVDYVPPAWALEGGEEEEGEGRG EGGARTLPGLLLGNGSELHKSEFPGLYEKLDRVGKQLYANCGENQHFNEY GHRLLGNFLYSLFGEAAREGVGEEREEEERRKEEGAVRARLSTTALEVFE RVSSGSSGHTVSCNLTLTQGRALDLVPVARSNYTLWTEKAEGSSDIFSGG KKKRSDRKQTWSPLSENATLDFDSIVPIGVREGGKEGGRE* back to topmRNA from alignment at chr7:45805..49184- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G00130.1 ID=NO07G00130.1|Name=NO07G00130.1|organism=Nannochloropsis oceanica|type=mRNA|length=3380bp|location=Sequence derived from alignment at chr7:45805..49184- (Nannochloropsis oceanica) ATGAGCAATTCCCAGCGCTACCAGGGCTTGGGTTCGGCCAATAGCGGGCT
GCAATCCCAGGGACCGCAACGCGCGTCCACAGCGTGCCGGCTCGCAACAT
TAGGTTGTGTCGCCAGCACGATCATCCTTGGCCTCTTCTTCTTCCGCTTC
CCTTTCCCATCCTCCTCGTTTCCGCCTCATCCCACGCCATTCCCCTCGCC
ATCGCCTTCGCCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTT
CCACCACAGGACTCGCCGTCCCCAACCCCCTCCCCGAGACGATCCAAAAC
AAATGCGCGGCAGCCGCCAAAGCCCTGCGTCAACGGTCCGGGTGGGACTA
TATGCGTGTAATGCGAAAAGGCCAAGCCAGCAAAGACAGTGTCGCCCACC
TCGGGAGCCTGGCCCGACTCGCGGGAGCCATCCAAAAAGCCAACGACGAG
AAACGTCCCCTTAAAATAGCCGTGCTGGGAGGTTCGTTTTCCGCTGGTGG
TGCCGTGGCAGACATGGAGGATTCCTACCCCGAGGTCCTCGCCTCCCTCC
TGGCGGGGCGAGACACGGACAGTGGGGAGGGGCCCGTACCTCCCTCCCCC
ATCTTGTTTGGGGCGGAGATTGTGAATATGGCGCAGGGAGGGGCAGGATT
TATGCTGCCCTTGTTCTGCACGATGAAGGTGTATTCGCTAGTGGCTGAGC
AGCCGGAGCGGGTGCCTGATGTGTGGGTGGTGGAATTTGGGGAGAACTTT
GACTCGACGCTGGACCAGTACGAGGTGCGTGCGTGCGGCTAGAGGTGGGG
CTTGAAGAGGAAAGAGGAGTGTGTATGTGTGTTGGCTTGTTGAAGTGTTG
TTCTGAATGGGGGAAAATGCTGGGTTGGCTTGGGCTGGGCATGGGCAGGG
GGGCACTGGGGGAGTGGAAGGAGGAACGGAAGAAGCGCTCCAGGCTCCGA
GTCTATTTCTTTCCCGATATCCCTTCTTTGTGTGATAAAGGGGATCGAAA
AACCTATGTACTTGCATTCTTTTTTATGTTCCTCACTTACTGCGTATGTA
TGCATGTAGCGCCTTTTCTCTTTCCTTCGCCCACGCATTCCTCCCTCCCT
CCCTCCCGCCCACCCTCCCTCCTCCCCACCCTCCCTCCTTCAGGCCCTGC
TTGCCATGCTCCTACTCGACCACGCCCGATTTAGGAGCCCCGCCGTGCTG
ACCGTCGCAGTGGCCAAGAACTTCTGCTGGTGGTCCGACGGGCCCATAAG
GGCGGCTCAGTGCGGCCTCCAACGCACTTGGGGATGGTTGAAAGCGGCTG
CGAAGACGATGGACGTCCCCTTGATCTCGTTCGTGCACGGCGTGGCACCT
TGGGTGGACTATGTGCCGCCGGCGTGGGCTCTTGAAGGAGGGGAGGAGGA
GGAGGGGGAGGGCAGGGGGGAGGGAGGGGCGAGGACGTTGCCGGGCTTGC
TGTTGGGGAATGGGAGTGAGCTTCACAAGTCGGAGTTTCCCGGGTTGTAC
GAGAAGCTGGATAGGGTCGGAAAGCAGCTGTATGCGAACTGTGGGGAGAA
CCAGCACTTTAACGAGTACGGGCACCGGCTGCTAGGCAACTTTCTGTACA
GCCTGTTCGGGGAGGCGGCCAGGGAGGGCGTGGGGGAGGAGAGGGAGGAG
GAGGAGAGGAGGAAGGAGGAGGGGGCGGTGAGGGCGCGGCTGTCGACGAC
TGCGTTGGAGGTGTTTGAGAGGGTCTCGAGTGGCTCGAGCGGGCATACGG
TGTCGTGCAACCTAACCTTAACGCAGGTAAGGAGGAAGGAAGGAAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCATA
GCATAATCTATTCCTCCTTACGAATCAAACACTCACCTCATCTCACCTCC
CTCCCTCTTGCCCTCCCTTCCTCAGGGCCGCGCCTTGGACTTGGTGCCTG
TCGCTCGATCGAACTACACCCTCTGGACGGAGAAGGCCGAGGGGAGCAGT
GATATCTTCAGTGGGGGAAAGAAGAAGCGATCGGACCGGAAGCAGACCTG
GTCGCCACTGAGTGAGAATGCCACGCTCGACTTCGATTCCATCGTACCGA
TAGGGGTGAGGGAGGGAGGGAAGGAGGGAGGAAGGGAATGATAGGGAAGG
CGGTTGGGTTTCTTAGGTTACGGTAAAACGACGATCTTTAGACAACAATA
TTTTCTCCTTCGTCTATACGAAACCTCTCCTTCCACCCTTCCCTCTCTCT
TCCCTTCCCATTAGGCGAGCACGTTGTGCGTGTTGATGTACGGGAGCCAA
GGCATGTACCTGAATGCCTCTTTCCCAGAATATCCTACCCGGATGGTGGA
AGAGGTGGTGGAAGAAGAGGTAGAGGAGGATGAGGAGGGGGGCAGCGGGG
AGGGAGGGAAAGACGGAGGGATGGTCCACGAGAAGGAGAGGGAGAGAGGG
GAAGACGGCTTGTGTCGGCAGGTGCAGCCGAACGGAAAAATCAAGGTGGT
AATGTGTGACAGCAGCAGCAATAATAGCAGCAGCAAGAGGAACAAAAAGA
AGGAAAATGACGCTTCCACTCCCTCCACCACCTCCCTCCGTGCTGGTCCC
AGCATAAGGAGTGGCAAACCCACCGGCAGCGTCATCACGGGAGAAGCAGC
AGCGTCACCACTAAAGAAGAAGGGAACGACCAAGACAAGGCTGGTGGCCC
AAAAGCGCCCGGATGGGTCGCCCTACCTCCTCCTTACTGACAGCACCTGC
GAGTACCGTGGGGGGTAGACTGGACCATCTACTCTGTCTATAAAATTGAC
TGTGGCTGCTCCTTGCCCCAAGCCATGGCGGACGGGAAGATGCACCGCAT
CCAACTGAAGAATACCAGGGGGAAAGTGCAGGTGGCAGGCTTGGTTATTT
GGTAATAATTAAGACAAAGAAAGATAGAGGGACAGAGGGAGCCGGATTGG
AGACAGCCTGGTATTCGATAGTATTCGATGGATTCATCTGATTAAAGAGG
AACATTTAGAAATGGGAAGAAGAGCGACTATGGGTTTTTGATTGTAATAC
GTGTGTGTATGTGTGTTTGACTCTTGCTCTTCGAAAGAAGGGCGGACCTT
CTATAGGTAGTATGCTGTGTTTGACAGCTACACAAGGCCAGAAAGTAAAG
AGCCAGGAGAAGAAGTGGCATGCGATGGGCATACGAATGTTATTAAAATA
AATAAATGCGAGTGTACAGAAAAATGGGGGCATGGTGAGCACGGGCACTA
ATGAAATAGCAACACAACGACGGTTTATGACTGGCGTAGTGTGCAGAGTT
GGAGCGGGATGAGAAGACATGATGCGGCCCATGGTGGCAATAAGTCCTTT
TTTGAAATAACAATATGTTTTGCACAGGAG back to topCoding sequence (CDS) from alignment at chr7:45805..49184- >NO07G00130.1 ID=NO07G00130.1|Name=NO07G00130.1|organism=Nannochloropsis oceanica|type=CDS|length=1623bp|location=Sequence derived from alignment at chr7:45805..49184- (Nannochloropsis oceanica) ATGAGCAATTCCCAGCGCTACCAGGGCTTGGGTTCGGCCAATAGCGGGCT GCAATCCCAGGGACCGCAACGCGCGTCCACAGCGTGCCGGCTCGCAACAT TAGGTTGTGTCGCCAGCACGATCATCCTTGGCCTCTTCTTCTTCCGCTTC CCTTTCCCATCCTCCTCGTTTCCGCCTCATCCCACGCCATTCCCCTCGCC ATCGCCTTCGCCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTT CCACCACAGGACTCGCCGTCCCCAACCCCCTCCCCGAGACGATCCAAAAC AAATGCGCGGCAGCCGCCAAAGCCCTGCGTCAACGGTCCGGGTGGGACTA TATGCGTGTAATGCGAAAAGGCCAAGCCAGCAAAGACAGTGTCGCCCACC TCGGGAGCCTGGCCCGACTCGCGGGAGCCATCCAAAAAGCCAACGACGAG AAACGTCCCCTTAAAATAGCCGTGCTGGGAGGTTCGTTTTCCGCTGGTGG TGCCGTGGCAGACATGGAGGATTCCTACCCCGAGGTCCTCGCCTCCCTCC TGGCGGGGCGAGACACGGACAGTGGGGAGGGGCCCGTACCTCCCTCCCCC ATCTTGTTTGGGGCGGAGATTGTGAATATGGCGCAGGGAGGGGCAGGATT TATGCTGCCCTTGTTCTGCACGATGAAGGTGTATTCGCTAGTGGCTGAGC AGCCGGAGCGGGTGCCTGATGTGTGGGTGGTGGAATTTGGGGAGAACTTT GACTCGACGCTGGACCAGTACGAGGCCCTGCTTGCCATGCTCCTACTCGA CCACGCCCGATTTAGGAGCCCCGCCGTGCTGACCGTCGCAGTGGCCAAGA ACTTCTGCTGGTGGTCCGACGGGCCCATAAGGGCGGCTCAGTGCGGCCTC CAACGCACTTGGGGATGGTTGAAAGCGGCTGCGAAGACGATGGACGTCCC CTTGATCTCGTTCGTGCACGGCGTGGCACCTTGGGTGGACTATGTGCCGC CGGCGTGGGCTCTTGAAGGAGGGGAGGAGGAGGAGGGGGAGGGCAGGGGG GAGGGAGGGGCGAGGACGTTGCCGGGCTTGCTGTTGGGGAATGGGAGTGA GCTTCACAAGTCGGAGTTTCCCGGGTTGTACGAGAAGCTGGATAGGGTCG GAAAGCAGCTGTATGCGAACTGTGGGGAGAACCAGCACTTTAACGAGTAC GGGCACCGGCTGCTAGGCAACTTTCTGTACAGCCTGTTCGGGGAGGCGGC CAGGGAGGGCGTGGGGGAGGAGAGGGAGGAGGAGGAGAGGAGGAAGGAGG AGGGGGCGGTGAGGGCGCGGCTGTCGACGACTGCGTTGGAGGTGTTTGAG AGGGTCTCGAGTGGCTCGAGCGGGCATACGGTGTCGTGCAACCTAACCTT AACGCAGGGCCGCGCCTTGGACTTGGTGCCTGTCGCTCGATCGAACTACA CCCTCTGGACGGAGAAGGCCGAGGGGAGCAGTGATATCTTCAGTGGGGGA AAGAAGAAGCGATCGGACCGGAAGCAGACCTGGTCGCCACTGAGTGAGAA TGCCACGCTCGACTTCGATTCCATCGTACCGATAGGGGTGAGGGAGGGAG GGAAGGAGGGAGGAAGGGAATGA back to top
|