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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr6 | genome | chr6:1180009..1184374 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019147 | SWAP_N_domain |
Homology
BLAST of NO06G04240 vs. NCBI_GenBank
Match: CBJ26406.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.2 bits (178), Expect = 4.300e-9 Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 0
Query: 1 MQTHRKNFQQAQERRRRVEA--MRDPHHLLLVEGRACKILRQGPQQQQLESSLMPWQGRMDSMIDRFDVRAIMDFLPSSXXXXXXXXXXXXXXXXXXXXXADISSHDVRALLNYERYRPLVDALRHALPPSTLLDRVSTEIKQKL 144
++ H K + +ER ++ + RD H L++EGR CK+ R +E +LMPW GR D +IDRFD RA++D +P S + L++ERYR +VDA R L VS ++++KL
Sbjct: 15 LRKHAKENKARKERMKQFQRAHSRDHHQSLIIEGRPCKLYRDPAAGAVVEGALMPWNGRRDVLIDRFDARAVLDMVPLSPKGTGDHR----------------EKKGLETFLSFERYRGIVDAQRVGLGEKEHALAVSKQVEEKL 143
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G04240 ID=NO06G04240|Name=NO06G04240|organism=Nannochloropsis oceanica|type=gene|length=4366bp
ATGCAGACACACAGGgtaagttaaatagctcctcttatcctttctatcgt
tccctcgccctcccttctttatactgataggctacacgcaaccctaacct
cacatctacgccccaccgttcccttgccatttcaaggccagcttcccatc
tcaccctggctccctccaatcctctcccctccctcccctacctcccctac
ctccccacgacagAAAAACTTCCAACAAGCCCAAGAGCGACGCCGCCGCG
TGGAGGCCATGCGTGACCCACACCATTTACTTTTAGTGGAGGGGAGGGCC
TGTAAGATCCTGCGTCAGGGGCCACAACAACAGCAGTTGGAGAGCTCCCT
AATGCCCTGGCAGGGGAGGATGgtgagtgagaaaggaaaggaaaagaagt
gaaacgagatggaatgctggcgtctacagaagtaaatatttaagtatcta
tgtcatatacccatacatataaacgtgtcccagGACTCGATGATCGATCG
CTTTGACGTGCGGGCTATTATGGACTTCCTGCCTTCCTCCCCGCCCTCCT
CCTCCTCCTCCTCTTCCTTTTCTGACCGTCCCTCCGCCTCATCTAGCAGg
tgcgattgtcagaaatgtaacgatgcactcttcctctctctttcgcagtc
ttctttctgcttccttgttccgttttaacgcctcactacacaccaccatc
attcacctcttcttcccccgccctccctcccccttccccttgcccccacc
cggaagCGACGCCGACATTTCTTCACACGATGTGCGTGCTCTCTTAAACT
ACGAGCGATACCGGCCCCTTGTTGACGCTCTACGGCACGCCCTTCCTCCC
TCCACCCTCCTCGACAGgtattggagccgcaagctccttccttcattccc
ttcctccctccctccctacctacctcccctcctcccttcctccctccctc
cctacctccctcccctcctcccttcctcccttcttcccttcctcgactga
ctcctcttcttcttatcgccttcactacctacctacctacctccctacct
ctccctcccttccttcctcctgccaaagGGTCTCCACGGAAATCAAGCAA
AAGCTTGTATCCTCCCCCTCTTCCTACGCTCCCTCCAGCGAGGGAGGAGG
GAGCGGCGGTCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCACCCTC
CCTTCAAGCCTGCGGGGGTGGAGGGGCATTACGGACCCTCGTCAAATGCG
AGACATGGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG
AGGGAAGGGGGAAGGGAACGAAAAGCTGGATCATCGTCTTCTGGCCTTGC
TGGGGAGTGGAAGCGAGCGAGAGGATGAGGAGGAGGAGAACGAGGAGGAG
GAAGAAAGgtggggaccaagcaagggagggagggagggagggagggaggg
agggagggagggagggagggagggagggagggagactaggtatcttcaac
ggctcatcaaatgtaatgaatgtttgttcctttttttctttttcttttca
aatttaaatttaaaaacaaaacaaaacagTGACCTTGATATATTGGAGGA
GAAGGAGGGAGGGGAGGAAGGCGACGCTCAAGCTCTCGATCGCTTCGCTT
CCCTCTATGGAATTGGGGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGAGAGAGAGGGAGAAAGGAGGGAGTGTCCGTTCGACTACACCTCCTT
GTTGCAGTTGGAGAGGCGAGAGCGGGAGGCCGTGCGGGTGGAGAGGGTGG
CGGCACGAGgtgaggacacgggaaagagggagggagggaggaagagaaag
ggagggagggagggagggaggaagggaaggcccgatgggaagggccacgc
ttacgcacacacacccacccgcgcacacaatcaaatcaatcagACGCCCG
GCGTGGGGCTGGTGCCCAGGGCTCGGCCGCCGCCCGTCGCAAAGCCCAGA
AGGAGAAGGAGAAGGAGGAAAAGAAGGAGGCCCGGCGGCTCAAAGTGCAG
GAGGCGTTGGCTGAGGGTCAGTACCGCCACCGACGAGAACGACGGAACAG
GAGGCCGCCCTCCTCCTCCTCCTCCTCCTCGCCCTCCCCCTCCAGgtata
tcagccttccctccctcctccctccctccctccctcctttcgtttctgtg
tcctgttgcttttcaaaatgttccacgtctcaaccgtccattccctccct
ctctccctccctctctcccttcctccctccctagGGCGTATGGCCGACGC
GAGTCGCCCGACTACACCAAAGGCGGCCGGGATGAGGATCCACGGAGGAG
ACGCGAGAGgtaaagggtgggagggatgaagggatggggggagggaggga
cggagggacggagggacggagggagggagggagggaggaagggagggagg
aagggagggagggagggaggaagggagggagggaggaaatggtcagtgtc
ctcataattttttctcaaacattgacagATCACGTTCCCCTTCACGTTCC
TCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCTTCTTCTTCTCTCGATCGTCGTCGTGGTGGGAGGCGGCCAG
ACGCGGCAGCAGTAGCAGCAGCAGCCAAGAAGAAGAGGGAGAAAGTGAAA
GAGAAGGAGAAAGAGAAGGAGAAGGAGAAGAGGGTGTATATCACTGAATT
TTCTCTTGCTCCTTCAGCACCCTCGCCCATGGAGGAGGAAAGGTGGGAGG
ATGAGGGGGAGGGAGGGAAGGAGGGAAGGGAAGGATACATGGAGGTGCTC
GCATTGTTCTTCCCAAGGCTGCATGCGGCGTCGTTGAAGAAGAAGGAGGA
GGAGAAGAGGAAGGAGAAGGAAAGGAGGGAGCGAAGGGCGGAGAAGGAGA
GAAAAGAGGAGGAGAAGCGGCAGGCGAGGAGGTCATGGAGGGAGAAGAGG
AGGAGGAAGAGGGAGGAGAGGGAAAGAGCGGAGAAAGAGGAAAAAGACCG
GCAGAGGAGGAGGGAAGGGAGGAGGCGGGAGACAGGAAGAGACGGGAAGG
GCATTGAGGAGGATGGGGAGGAGGAGGATAAAGATCGAAGGAGGAGGAAG
AGGAGGAGCAGGGAAAATAGCAGCGAGCACGAGAAGAGGGAGTCGGTCGG
GAGAGGTCGAGATAGGGACGGAAAACGGCAGCGAACCCCTCCTGCCTCCC
GCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
TCTCCTTCAGTTAGTGCCGAGGAGAAAAAGTCGGCGGCGGCAGAAGCAGC
AGCAGCCAAGAGATTTATGACGCCCGgtaagaggggattaggggagggag
ggaggagggagggagggagggagggagggagggggggcacaagggctact
cgtgctcacacagacttctaaatatggccgaactaacagCGGAGAGGCTG
CGTGAGAAAATGCGGCAGCAGCTGGCGTCGACCATTCGGCAGGATCAGCA
AGAGGAGCAGAAGAAGGCCGCGAAGAAGAAGCAGgcagggagggaggaag
gggaggggggggggaggggggagggagaaagagtaggaaggaatgcattt
cttcaatcaattccatatatttattcaacacagGAGGAGAAGATAGAGCG
GGCGATATGTGAGCTGGGGCTGACAGCCCCACCCCCGCCGCCGGAGCCCT
ATAAAAGGAGGAAGAAGGAGGGCGTGGGGTATGGGGGAGgtcgggaaggg
agggagggagggagggagggagggagggagggaggggaggaggggcatta
tggaccgaggaggggggagagggaggagggagaggagggagggaggggtg
aagggagggagggagggagagggagaggggaggagaggaggaggcggtcg
agttcgaaggagagaagcagagcgggagagagggagggcgggagggaggg
aggccagcgatggtgagggatacacattcttgtcacgccggtttaaggag
agtgtgtggaataatggtgctttaaagccacgagaagcaaatcaacagaa
cacgatcagagaagaggaacacatcccaaagtgaagaatgcatcctagaa
agctaatttgatttgattaacattgtactccgcgcacccacccgagCGGA
GGAAAAATGGATTAAGACTATTCCGAGGCGTCTCCGGCCCGCGGAGGTGA
CAGCCAGCGATTTCTGTATACAGTATTTATGCTTTTCTCTCGTCCTTTTC
CCTTTGCTGCATACCCGGAACGATAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCTCTCTATGA back to topprotein sequence of NO06G04240.1 >NO06G04240.1-protein ID=NO06G04240.1-protein|Name=NO06G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=819bp
MQTHRKNFQQAQERRRRVEAMRDPHHLLLVEGRACKILRQGPQQQQLESS
LMPWQGRMDSMIDRFDVRAIMDFLPSSPPSSSSSSSFSDRPSASSSSDAD
ISSHDVRALLNYERYRPLVDALRHALPPSTLLDRVSTEIKQKLVSSPSSY
APSSEGGGSGGPPSLPPSRPPSHPPFKPAGVEGHYGPSSNARHGKGGREG
GKEGGREGGKGEGNEKLDHRLLALLGSGSEREDEEEENEEEEESDLDILE
EKEGGEEGDAQALDRFASLYGIGGRGGGREGGREGEREGERRECPFDYTS
LLQLERREREAVRVERVAARDARRGAGAQGSAAARRKAQKEKEKEEKKEA
RRLKVQEALAEGQYRHRRERRNRRPPSSSSSSSPSPSRAYGRRESPDYTK
GGRDEDPRRRRERSRSPSRSSSSSSSSSSSSSSSSSSSSSSSSLDRRRGG
RRPDAAAVAAAAKKKREKVKEKEKEKEKEKRVYITEFSLAPSAPSPMEEE
RWEDEGEGGKEGREGYMEVLALFFPRLHAASLKKKEEEKRKEKERRERRA
EKERKEEEKRQARRSWREKRRRKREERERAEKEEKDRQRRREGRRRETGR
DGKGIEEDGEEEDKDRRRRKRRSRENSSEHEKRESVGRGRDRDGKRQRTP
PASRPPPPPPPPPPPPPPPPSPSVSAEEKKSAAAEAAAAKRFMTPAERLR
EKMRQQLASTIRQDQQEEQKKAAKKKQEEKIERAICELGLTAPPPPPEPY
KRRKKEGVGYGGAEEKWIKTIPRRLRPAEVTASDFCIQYLCFSLVLFPLL
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