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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:1180009..1184374 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G04240.1 ID=NO06G04240.1|Name=NO06G04240.1|organism=Nannochloropsis oceanica|type=mRNA|length=2457bp ATGCAGACACACAGGAAAAACTTCCAACAAGCCCAAGAGCGACGCCGCCG CGTGGAGGCCATGCGTGACCCACACCATTTACTTTTAGTGGAGGGGAGGG CCTGTAAGATCCTGCGTCAGGGGCCACAACAACAGCAGTTGGAGAGCTCC CTAATGCCCTGGCAGGGGAGGATGGACTCGATGATCGATCGCTTTGACGT GCGGGCTATTATGGACTTCCTGCCTTCCTCCCCGCCCTCCTCCTCCTCCT CCTCTTCCTTTTCTGACCGTCCCTCCGCCTCATCTAGCAGCGACGCCGAC ATTTCTTCACACGATGTGCGTGCTCTCTTAAACTACGAGCGATACCGGCC CCTTGTTGACGCTCTACGGCACGCCCTTCCTCCCTCCACCCTCCTCGACA GGGTCTCCACGGAAATCAAGCAAAAGCTTGTATCCTCCCCCTCTTCCTAC GCTCCCTCCAGCGAGGGAGGAGGGAGCGGCGGTCCTCCCTCCCTCCCTCC CTCCCGCCCTCCCTCCCACCCTCCCTTCAAGCCTGCGGGGGTGGAGGGGC ATTACGGACCCTCGTCAAATGCGAGACATGGGAAGGGAGGGAGGGAGGGA GGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGGGGAAGGGAACGAAAAGCT GGATCATCGTCTTCTGGCCTTGCTGGGGAGTGGAAGCGAGCGAGAGGATG AGGAGGAGGAGAACGAGGAGGAGGAAGAAAGTGACCTTGATATATTGGAG GAGAAGGAGGGAGGGGAGGAAGGCGACGCTCAAGCTCTCGATCGCTTCGC TTCCCTCTATGGAATTGGGGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGG AGGGAGAGAGAGAGGGAGAAAGGAGGGAGTGTCCGTTCGACTACACCTCC TTGTTGCAGTTGGAGAGGCGAGAGCGGGAGGCCGTGCGGGTGGAGAGGGT GGCGGCACGAGACGCCCGGCGTGGGGCTGGTGCCCAGGGCTCGGCCGCCG CCCGTCGCAAAGCCCAGAAGGAGAAGGAGAAGGAGGAAAAGAAGGAGGCC CGGCGGCTCAAAGTGCAGGAGGCGTTGGCTGAGGGTCAGTACCGCCACCG ACGAGAACGACGGAACAGGAGGCCGCCCTCCTCCTCCTCCTCCTCCTCGC CCTCCCCCTCCAGGGCGTATGGCCGACGCGAGTCGCCCGACTACACCAAA GGCGGCCGGGATGAGGATCCACGGAGGAGACGCGAGAGATCACGTTCCCC TTCACGTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCT CCTCCTCCTCCTCCTCCTCTTCTTCTTCTCTCGATCGTCGTCGTGGTGGG AGGCGGCCAGACGCGGCAGCAGTAGCAGCAGCAGCCAAGAAGAAGAGGGA GAAAGTGAAAGAGAAGGAGAAAGAGAAGGAGAAGGAGAAGAGGGTGTATA TCACTGAATTTTCTCTTGCTCCTTCAGCACCCTCGCCCATGGAGGAGGAA AGGTGGGAGGATGAGGGGGAGGGAGGGAAGGAGGGAAGGGAAGGATACAT GGAGGTGCTCGCATTGTTCTTCCCAAGGCTGCATGCGGCGTCGTTGAAGA AGAAGGAGGAGGAGAAGAGGAAGGAGAAGGAAAGGAGGGAGCGAAGGGCG GAGAAGGAGAGAAAAGAGGAGGAGAAGCGGCAGGCGAGGAGGTCATGGAG GGAGAAGAGGAGGAGGAAGAGGGAGGAGAGGGAAAGAGCGGAGAAAGAGG AAAAAGACCGGCAGAGGAGGAGGGAAGGGAGGAGGCGGGAGACAGGAAGA GACGGGAAGGGCATTGAGGAGGATGGGGAGGAGGAGGATAAAGATCGAAG GAGGAGGAAGAGGAGGAGCAGGGAAAATAGCAGCGAGCACGAGAAGAGGG AGTCGGTCGGGAGAGGTCGAGATAGGGACGGAAAACGGCAGCGAACCCCT CCTGCCTCCCGCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCCTCCTTCTCCTTCAGTTAGTGCCGAGGAGAAAAAGTCGGCGGCGG CAGAAGCAGCAGCAGCCAAGAGATTTATGACGCCCGCGGAGAGGCTGCGT GAGAAAATGCGGCAGCAGCTGGCGTCGACCATTCGGCAGGATCAGCAAGA GGAGCAGAAGAAGGCCGCGAAGAAGAAGCAGGAGGAGAAGATAGAGCGGG CGATATGTGAGCTGGGGCTGACAGCCCCACCCCCGCCGCCGGAGCCCTAT AAAAGGAGGAAGAAGGAGGGCGTGGGGTATGGGGGAGCGGAGGAAAAATG GATTAAGACTATTCCGAGGCGTCTCCGGCCCGCGGAGGTGACAGCCAGCG ATTTCTGTATACAGTATTTATGCTTTTCTCTCGTCCTTTTCCCTTTGCTG CATACCCGGAACGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTC TCTATGA back to topprotein sequence of NO06G04240.1 >NO06G04240.1-protein ID=NO06G04240.1-protein|Name=NO06G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=819bp MQTHRKNFQQAQERRRRVEAMRDPHHLLLVEGRACKILRQGPQQQQLESS LMPWQGRMDSMIDRFDVRAIMDFLPSSPPSSSSSSSFSDRPSASSSSDAD ISSHDVRALLNYERYRPLVDALRHALPPSTLLDRVSTEIKQKLVSSPSSY APSSEGGGSGGPPSLPPSRPPSHPPFKPAGVEGHYGPSSNARHGKGGREG GKEGGREGGKGEGNEKLDHRLLALLGSGSEREDEEEENEEEEESDLDILE EKEGGEEGDAQALDRFASLYGIGGRGGGREGGREGEREGERRECPFDYTS LLQLERREREAVRVERVAARDARRGAGAQGSAAARRKAQKEKEKEEKKEA RRLKVQEALAEGQYRHRRERRNRRPPSSSSSSSPSPSRAYGRRESPDYTK GGRDEDPRRRRERSRSPSRSSSSSSSSSSSSSSSSSSSSSSSSLDRRRGG RRPDAAAVAAAAKKKREKVKEKEKEKEKEKRVYITEFSLAPSAPSPMEEE RWEDEGEGGKEGREGYMEVLALFFPRLHAASLKKKEEEKRKEKERRERRA EKERKEEEKRQARRSWREKRRRKREERERAEKEEKDRQRRREGRRRETGR DGKGIEEDGEEEDKDRRRRKRRSRENSSEHEKRESVGRGRDRDGKRQRTP PASRPPPPPPPPPPPPPPPPSPSVSAEEKKSAAAEAAAAKRFMTPAERLR EKMRQQLASTIRQDQQEEQKKAAKKKQEEKIERAICELGLTAPPPPPEPY KRRKKEGVGYGGAEEKWIKTIPRRLRPAEVTASDFCIQYLCFSLVLFPLL HTRNDSSSSSSSSSSSSL* back to topmRNA from alignment at chr6:1180009..1184374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G04240.1 ID=NO06G04240.1|Name=NO06G04240.1|organism=Nannochloropsis oceanica|type=mRNA|length=4366bp|location=Sequence derived from alignment at chr6:1180009..1184374+ (Nannochloropsis oceanica) ATGCAGACACACAGGGTAAGTTAAATAGCTCCTCTTATCCTTTCTATCGT
TCCCTCGCCCTCCCTTCTTTATACTGATAGGCTACACGCAACCCTAACCT
CACATCTACGCCCCACCGTTCCCTTGCCATTTCAAGGCCAGCTTCCCATC
TCACCCTGGCTCCCTCCAATCCTCTCCCCTCCCTCCCCTACCTCCCCTAC
CTCCCCACGACAGAAAAACTTCCAACAAGCCCAAGAGCGACGCCGCCGCG
TGGAGGCCATGCGTGACCCACACCATTTACTTTTAGTGGAGGGGAGGGCC
TGTAAGATCCTGCGTCAGGGGCCACAACAACAGCAGTTGGAGAGCTCCCT
AATGCCCTGGCAGGGGAGGATGGTGAGTGAGAAAGGAAAGGAAAAGAAGT
GAAACGAGATGGAATGCTGGCGTCTACAGAAGTAAATATTTAAGTATCTA
TGTCATATACCCATACATATAAACGTGTCCCAGGACTCGATGATCGATCG
CTTTGACGTGCGGGCTATTATGGACTTCCTGCCTTCCTCCCCGCCCTCCT
CCTCCTCCTCCTCTTCCTTTTCTGACCGTCCCTCCGCCTCATCTAGCAGG
TGCGATTGTCAGAAATGTAACGATGCACTCTTCCTCTCTCTTTCGCAGTC
TTCTTTCTGCTTCCTTGTTCCGTTTTAACGCCTCACTACACACCACCATC
ATTCACCTCTTCTTCCCCCGCCCTCCCTCCCCCTTCCCCTTGCCCCCACC
CGGAAGCGACGCCGACATTTCTTCACACGATGTGCGTGCTCTCTTAAACT
ACGAGCGATACCGGCCCCTTGTTGACGCTCTACGGCACGCCCTTCCTCCC
TCCACCCTCCTCGACAGGTATTGGAGCCGCAAGCTCCTTCCTTCATTCCC
TTCCTCCCTCCCTCCCTACCTACCTCCCCTCCTCCCTTCCTCCCTCCCTC
CCTACCTCCCTCCCCTCCTCCCTTCCTCCCTTCTTCCCTTCCTCGACTGA
CTCCTCTTCTTCTTATCGCCTTCACTACCTACCTACCTACCTCCCTACCT
CTCCCTCCCTTCCTTCCTCCTGCCAAAGGGTCTCCACGGAAATCAAGCAA
AAGCTTGTATCCTCCCCCTCTTCCTACGCTCCCTCCAGCGAGGGAGGAGG
GAGCGGCGGTCCTCCCTCCCTCCCTCCCTCCCGCCCTCCCTCCCACCCTC
CCTTCAAGCCTGCGGGGGTGGAGGGGCATTACGGACCCTCGTCAAATGCG
AGACATGGGAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG
AGGGAAGGGGGAAGGGAACGAAAAGCTGGATCATCGTCTTCTGGCCTTGC
TGGGGAGTGGAAGCGAGCGAGAGGATGAGGAGGAGGAGAACGAGGAGGAG
GAAGAAAGGTGGGGACCAAGCAAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGACTAGGTATCTTCAAC
GGCTCATCAAATGTAATGAATGTTTGTTCCTTTTTTTCTTTTTCTTTTCA
AATTTAAATTTAAAAACAAAACAAAACAGTGACCTTGATATATTGGAGGA
GAAGGAGGGAGGGGAGGAAGGCGACGCTCAAGCTCTCGATCGCTTCGCTT
CCCTCTATGGAATTGGGGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGAGAGAGAGGGAGAAAGGAGGGAGTGTCCGTTCGACTACACCTCCTT
GTTGCAGTTGGAGAGGCGAGAGCGGGAGGCCGTGCGGGTGGAGAGGGTGG
CGGCACGAGGTGAGGACACGGGAAAGAGGGAGGGAGGGAGGAAGAGAAAG
GGAGGGAGGGAGGGAGGGAGGAAGGGAAGGCCCGATGGGAAGGGCCACGC
TTACGCACACACACCCACCCGCGCACACAATCAAATCAATCAGACGCCCG
GCGTGGGGCTGGTGCCCAGGGCTCGGCCGCCGCCCGTCGCAAAGCCCAGA
AGGAGAAGGAGAAGGAGGAAAAGAAGGAGGCCCGGCGGCTCAAAGTGCAG
GAGGCGTTGGCTGAGGGTCAGTACCGCCACCGACGAGAACGACGGAACAG
GAGGCCGCCCTCCTCCTCCTCCTCCTCCTCGCCCTCCCCCTCCAGGTATA
TCAGCCTTCCCTCCCTCCTCCCTCCCTCCCTCCCTCCTTTCGTTTCTGTG
TCCTGTTGCTTTTCAAAATGTTCCACGTCTCAACCGTCCATTCCCTCCCT
CTCTCCCTCCCTCTCTCCCTTCCTCCCTCCCTAGGGCGTATGGCCGACGC
GAGTCGCCCGACTACACCAAAGGCGGCCGGGATGAGGATCCACGGAGGAG
ACGCGAGAGGTAAAGGGTGGGAGGGATGAAGGGATGGGGGGAGGGAGGGA
CGGAGGGACGGAGGGACGGAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGG
AAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAATGGTCAGTGTC
CTCATAATTTTTTCTCAAACATTGACAGATCACGTTCCCCTTCACGTTCC
TCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCTTCTTCTTCTCTCGATCGTCGTCGTGGTGGGAGGCGGCCAG
ACGCGGCAGCAGTAGCAGCAGCAGCCAAGAAGAAGAGGGAGAAAGTGAAA
GAGAAGGAGAAAGAGAAGGAGAAGGAGAAGAGGGTGTATATCACTGAATT
TTCTCTTGCTCCTTCAGCACCCTCGCCCATGGAGGAGGAAAGGTGGGAGG
ATGAGGGGGAGGGAGGGAAGGAGGGAAGGGAAGGATACATGGAGGTGCTC
GCATTGTTCTTCCCAAGGCTGCATGCGGCGTCGTTGAAGAAGAAGGAGGA
GGAGAAGAGGAAGGAGAAGGAAAGGAGGGAGCGAAGGGCGGAGAAGGAGA
GAAAAGAGGAGGAGAAGCGGCAGGCGAGGAGGTCATGGAGGGAGAAGAGG
AGGAGGAAGAGGGAGGAGAGGGAAAGAGCGGAGAAAGAGGAAAAAGACCG
GCAGAGGAGGAGGGAAGGGAGGAGGCGGGAGACAGGAAGAGACGGGAAGG
GCATTGAGGAGGATGGGGAGGAGGAGGATAAAGATCGAAGGAGGAGGAAG
AGGAGGAGCAGGGAAAATAGCAGCGAGCACGAGAAGAGGGAGTCGGTCGG
GAGAGGTCGAGATAGGGACGGAAAACGGCAGCGAACCCCTCCTGCCTCCC
GCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
TCTCCTTCAGTTAGTGCCGAGGAGAAAAAGTCGGCGGCGGCAGAAGCAGC
AGCAGCCAAGAGATTTATGACGCCCGGTAAGAGGGGATTAGGGGAGGGAG
GGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGCACAAGGGCTACT
CGTGCTCACACAGACTTCTAAATATGGCCGAACTAACAGCGGAGAGGCTG
CGTGAGAAAATGCGGCAGCAGCTGGCGTCGACCATTCGGCAGGATCAGCA
AGAGGAGCAGAAGAAGGCCGCGAAGAAGAAGCAGGCAGGGAGGGAGGAAG
GGGAGGGGGGGGGGAGGGGGGAGGGAGAAAGAGTAGGAAGGAATGCATTT
CTTCAATCAATTCCATATATTTATTCAACACAGGAGGAGAAGATAGAGCG
GGCGATATGTGAGCTGGGGCTGACAGCCCCACCCCCGCCGCCGGAGCCCT
ATAAAAGGAGGAAGAAGGAGGGCGTGGGGTATGGGGGAGGTCGGGAAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGAGGGGCATTA
TGGACCGAGGAGGGGGGAGAGGGAGGAGGGAGAGGAGGGAGGGAGGGGTG
AAGGGAGGGAGGGAGGGAGAGGGAGAGGGGAGGAGAGGAGGAGGCGGTCG
AGTTCGAAGGAGAGAAGCAGAGCGGGAGAGAGGGAGGGCGGGAGGGAGGG
AGGCCAGCGATGGTGAGGGATACACATTCTTGTCACGCCGGTTTAAGGAG
AGTGTGTGGAATAATGGTGCTTTAAAGCCACGAGAAGCAAATCAACAGAA
CACGATCAGAGAAGAGGAACACATCCCAAAGTGAAGAATGCATCCTAGAA
AGCTAATTTGATTTGATTAACATTGTACTCCGCGCACCCACCCGAGCGGA
GGAAAAATGGATTAAGACTATTCCGAGGCGTCTCCGGCCCGCGGAGGTGA
CAGCCAGCGATTTCTGTATACAGTATTTATGCTTTTCTCTCGTCCTTTTC
CCTTTGCTGCATACCCGGAACGATAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCTCTCTATGA back to topCoding sequence (CDS) from alignment at chr6:1180009..1184374+ >NO06G04240.1 ID=NO06G04240.1|Name=NO06G04240.1|organism=Nannochloropsis oceanica|type=CDS|length=2457bp|location=Sequence derived from alignment at chr6:1180009..1184374+ (Nannochloropsis oceanica) ATGCAGACACACAGGAAAAACTTCCAACAAGCCCAAGAGCGACGCCGCCG CGTGGAGGCCATGCGTGACCCACACCATTTACTTTTAGTGGAGGGGAGGG CCTGTAAGATCCTGCGTCAGGGGCCACAACAACAGCAGTTGGAGAGCTCC CTAATGCCCTGGCAGGGGAGGATGGACTCGATGATCGATCGCTTTGACGT GCGGGCTATTATGGACTTCCTGCCTTCCTCCCCGCCCTCCTCCTCCTCCT CCTCTTCCTTTTCTGACCGTCCCTCCGCCTCATCTAGCAGCGACGCCGAC ATTTCTTCACACGATGTGCGTGCTCTCTTAAACTACGAGCGATACCGGCC CCTTGTTGACGCTCTACGGCACGCCCTTCCTCCCTCCACCCTCCTCGACA GGGTCTCCACGGAAATCAAGCAAAAGCTTGTATCCTCCCCCTCTTCCTAC GCTCCCTCCAGCGAGGGAGGAGGGAGCGGCGGTCCTCCCTCCCTCCCTCC CTCCCGCCCTCCCTCCCACCCTCCCTTCAAGCCTGCGGGGGTGGAGGGGC ATTACGGACCCTCGTCAAATGCGAGACATGGGAAGGGAGGGAGGGAGGGA GGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGGGGAAGGGAACGAAAAGCT GGATCATCGTCTTCTGGCCTTGCTGGGGAGTGGAAGCGAGCGAGAGGATG AGGAGGAGGAGAACGAGGAGGAGGAAGAAAGTGACCTTGATATATTGGAG GAGAAGGAGGGAGGGGAGGAAGGCGACGCTCAAGCTCTCGATCGCTTCGC TTCCCTCTATGGAATTGGGGGGAGGGGGGGAGGGAGGGAGGGAGGGAGGG AGGGAGAGAGAGAGGGAGAAAGGAGGGAGTGTCCGTTCGACTACACCTCC TTGTTGCAGTTGGAGAGGCGAGAGCGGGAGGCCGTGCGGGTGGAGAGGGT GGCGGCACGAGACGCCCGGCGTGGGGCTGGTGCCCAGGGCTCGGCCGCCG CCCGTCGCAAAGCCCAGAAGGAGAAGGAGAAGGAGGAAAAGAAGGAGGCC CGGCGGCTCAAAGTGCAGGAGGCGTTGGCTGAGGGTCAGTACCGCCACCG ACGAGAACGACGGAACAGGAGGCCGCCCTCCTCCTCCTCCTCCTCCTCGC CCTCCCCCTCCAGGGCGTATGGCCGACGCGAGTCGCCCGACTACACCAAA GGCGGCCGGGATGAGGATCCACGGAGGAGACGCGAGAGATCACGTTCCCC TTCACGTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCT CCTCCTCCTCCTCCTCCTCTTCTTCTTCTCTCGATCGTCGTCGTGGTGGG AGGCGGCCAGACGCGGCAGCAGTAGCAGCAGCAGCCAAGAAGAAGAGGGA GAAAGTGAAAGAGAAGGAGAAAGAGAAGGAGAAGGAGAAGAGGGTGTATA TCACTGAATTTTCTCTTGCTCCTTCAGCACCCTCGCCCATGGAGGAGGAA AGGTGGGAGGATGAGGGGGAGGGAGGGAAGGAGGGAAGGGAAGGATACAT GGAGGTGCTCGCATTGTTCTTCCCAAGGCTGCATGCGGCGTCGTTGAAGA AGAAGGAGGAGGAGAAGAGGAAGGAGAAGGAAAGGAGGGAGCGAAGGGCG GAGAAGGAGAGAAAAGAGGAGGAGAAGCGGCAGGCGAGGAGGTCATGGAG GGAGAAGAGGAGGAGGAAGAGGGAGGAGAGGGAAAGAGCGGAGAAAGAGG AAAAAGACCGGCAGAGGAGGAGGGAAGGGAGGAGGCGGGAGACAGGAAGA GACGGGAAGGGCATTGAGGAGGATGGGGAGGAGGAGGATAAAGATCGAAG GAGGAGGAAGAGGAGGAGCAGGGAAAATAGCAGCGAGCACGAGAAGAGGG AGTCGGTCGGGAGAGGTCGAGATAGGGACGGAAAACGGCAGCGAACCCCT CCTGCCTCCCGCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCCTCCTTCTCCTTCAGTTAGTGCCGAGGAGAAAAAGTCGGCGGCGG CAGAAGCAGCAGCAGCCAAGAGATTTATGACGCCCGCGGAGAGGCTGCGT GAGAAAATGCGGCAGCAGCTGGCGTCGACCATTCGGCAGGATCAGCAAGA GGAGCAGAAGAAGGCCGCGAAGAAGAAGCAGGAGGAGAAGATAGAGCGGG CGATATGTGAGCTGGGGCTGACAGCCCCACCCCCGCCGCCGGAGCCCTAT AAAAGGAGGAAGAAGGAGGGCGTGGGGTATGGGGGAGCGGAGGAAAAATG GATTAAGACTATTCCGAGGCGTCTCCGGCCCGCGGAGGTGACAGCCAGCG ATTTCTGTATACAGTATTTATGCTTTTCTCTCGTCCTTTTCCCTTTGCTG CATACCCGGAACGATAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTC TCTATGA back to top
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