NO06G03880, NO06G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G03880 vs. NCBI_GenBank
Match: EWM26379.1 (phd finger domain protein [Nannochloropsis gaditana]) HSP 1 Score: 323.2 bits (827), Expect = 4.900e-84 Identity = 173/347 (49.86%), Postives = 205/347 (59.08%), Query Frame = 0 Query: 819 MKRNLRPARKVFRMMKEGWEGGRXXXXXXXXDREVVRKYEAMMMEKKRKEEAGE--EG-REGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVP----SLLLAPSPKKCALCATSGGAMRRT------GXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMYHGGRFGANSWVALCEAHTDAARFMGVRWAVG 1153 M+RNL PAR ++R M +EGG+ +R+VV +YE + ++KRKE G+ EG +EG EE ECAVCHR+EAGGRNS+VFCD CNMAVHTFCYCV+SLPAG+WHCQ CEA LE E G S LLAP PK+C LCAT+GGAMR+ EEWAHVECCRWLG++DGRTGEIP L PRL+ALRRH+ + TA + D +PSSL DY C V CP PH GGLLRCS P C SFFH CGRRN QEMYHG RFG +W+A C+ HTD RF+ + VG Sbjct: 1 MRRNLAPARVLYRKMVAAFEGGKSAFGRRRKERDVVARYETALEDRKRKEGGGDGREGEKEGAEETMTECAVCHRTEAGGRNSLVFCDGCNMAVHTFCYCVHSLPAGAWHCQVCEAGLECEVGGXXXXXXXXXXXXXXXXXXDYVSPLLAPPPKRCMLCATAGGAMRKAKNGSKKRRRPGADGKAMQADAQAPREGGEEEWAHVECCRWLGMIDGRTGEIPHLKPRLQALRRHHMREYTAAEKAASGDAGHGDGPFCSPSSLPTI---------DYKCHVQFCPCPHQGGLLRCSSPGCFSFFHATCGRRNGQEMYHGRRFGDRAWLAFCDLHTDPLRFVEIMTKVG 338
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_011609652.1 (PREDICTED: protein Jade-2 [Takifugu rubripes]) HSP 1 Score: 77.4 bits (189), Expect = 4.700e-10 Identity = 61/268 (22.76%), Postives = 88/268 (32.84%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121 V+ + E+ EK R+ EEG + + C VC E N +VFCD+CN+ VH CY + +P G+W C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P + C HTG ++CS+PSC FHV C NN EM Sbjct: 163 VLVELESTCEEKMRQAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPRGNWLCRTCALGVQ------------------------------PKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKVSHIPASRWALSCSLC-REHTGTCIQCSMPSCIVAFHVTCAFENNLEM 338
BLAST of NO06G03880 vs. NCBI_GenBank
Match: CAE30494.1 (TPA: putative Jade2 protein, partial [Takifugu rubripes]) HSP 1 Score: 76.6 bits (187), Expect = 8.000e-10 Identity = 61/268 (22.76%), Postives = 88/268 (32.84%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121 V+ + E+ EK R+ EEG + + C VC E N +VFCD+CN+ VH CY + +P G+W C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P + C HTG ++CS+PSC FHV C NN EM Sbjct: 113 VLVELESTCEEKMRQAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPRGNWLCRTCALGVQ------------------------------PKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKVSHIPASRWALSCSLC-REHTGTCIQCSMPSCIVAFHVTCAFDNNLEM 288
BLAST of NO06G03880 vs. NCBI_GenBank
Match: PIK41560.1 (hypothetical protein BSL78_21587 [Apostichopus japonicus]) HSP 1 Score: 75.9 bits (185), Expect = 1.400e-9 Identity = 63/249 (25.30%), Postives = 88/249 (35.34%), Query Frame = 0 Query: 872 EEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121 EEG + I CAVC ++ N +VFCD+C++ VH CY V +P GSW C+ C L+ E C LC GGAM+ T +WAHV C W+ V G++ + P K + +PPS A C + C TG ++CSV +C + +HV CG + EM Sbjct: 176 EEGLGIEYDEDICCAVCRAPDSEDGNEMVFCDKCDICVHQACYGVIKIPEGSWMCRCCALGLQPE------------------------------CMLCGKKGGAMKST--------------------RSGTKWAHVNCALWIPEVS--IGDVERMEPITKISQ-------------IPPSRWA------------------------LICNL--C-RERTGACIQCSVKTCKTAYHVTCGVEQSLEM 332
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_002179027.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49725.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.5 bits (184), Expect = 1.800e-9 Identity = 63/220 (28.64%), Postives = 94/220 (42.73%), Query Frame = 0 Query: 801 EDEVLAQLLELQEELVSTMKRNLRPA-RKVFRMMKEGWEGGRXXXXXXXXDREVVRKYEAMMMEKKRKE--EAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGL 1018 +DE+L LL +++L + N PA R + R + E + E YE M ++RKE +A E+ RE +++ C +C+ E N I+FC+ CN+AVH FCY + +PAG ++C AC R G+ + P AP P +C LC GA RT +W H+ C +W GL Sbjct: 838 DDEILRHLLSKKKQL-EEFEGNFEPALRSILRKIVEERTVYESPETVEQRNEEKNILYENKRMLQRRKEMDKAVEKQRE--QDMDAVCDICNDGEVTPDNQILFCEACNVAVHQFCYGIERIPAGDYYCLAC---------------RYLGRDKLDSAP----APLPIRCELCCKKEGAYIRTAAKSDDVSLATFG-----------KWVHMVCAKWQGL 1024
BLAST of NO06G03880 vs. NCBI_GenBank
Match: AAH97813.1 (LOC733278 protein, partial [Xenopus laevis]) HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9 Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122 V+ + E + E EEG + + C VC E N +VFCD+CN+ VH CY + ++P GSW C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P P + C TG ++CS+PSC + FHV C +N EM+ Sbjct: 169 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 345
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107505.1 (PREDICTED: protein Jade-2 isoform X3 [Xenopus laevis] >OCT88318.1 hypothetical protein XELAEV_18016951mg [Xenopus laevis]) HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9 Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122 V+ + E + E EEG + + C VC E N +VFCD+CN+ VH CY + ++P GSW C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P P + C TG ++CS+PSC + FHV C +N EM+ Sbjct: 170 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 346
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107503.1 (PREDICTED: protein Jade-2 isoform X1 [Xenopus laevis]) HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9 Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122 V+ + E + E EEG + + C VC E N +VFCD+CN+ VH CY + ++P GSW C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P P + C TG ++CS+PSC + FHV C +N EM+ Sbjct: 170 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 346
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107504.1 (PREDICTED: protein Jade-2 isoform X2 [Xenopus laevis]) HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9 Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122 V+ + E + E EEG + + C VC E N +VFCD+CN+ VH CY + ++P GSW C+ C ++ KC LC GGA++ T +W HV C W+ P+ + P ++P P + C TG ++CS+PSC + FHV C +N EM+ Sbjct: 169 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 345
BLAST of NO06G03880 vs. NCBI_GenBank
Match: PVD35229.1 (hypothetical protein C0Q70_06510 [Pomacea canaliculata]) HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9 Identity = 59/268 (22.01%), Postives = 88/268 (32.84%), Query Frame = 0 Query: 853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121 V+ + E EK EEG + + C VC E+ N +VFCD C++ +H CY + S+P GSW C+ C ++ +C LC +GGAM+ T +WAHV C W+ P+ + P ++P P + C G ++CSV +C + FHV CG +N EM Sbjct: 204 VMEELENQCHEKMTAVMKTEEGLGIEYDEDVVCDVCRSPESEDTNEMVFCDGCDICIHQACYGIQSIPEGSWLCRTCALGIK------------------------------PRCILCPKTGGAMKST--------------------RSGTKWAHVSCALWI-----------------------------------------PEVSIGVPEKMEPITKISNIPPSRWGLCCNLC-KERVGACIQCSVKTCKTAFHVTCGFQNGLEM 379 The following BLAST results are available for this feature:
BLAST of NO06G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G03880 ID=NO06G03880|Name=NO06G03880|organism=Nannochloropsis oceanica|type=gene|length=5765bpback to top protein sequence of NO06G03880.1 >NO06G03880.1-protein ID=NO06G03880.1-protein|Name=NO06G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1690bpback to top Synonyms
Publications
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