NO06G03880, NO06G03880 (gene) Nannochloropsis oceanica

Overview
NameNO06G03880
Unique NameNO06G03880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5765
Alignment locationchr6:1083116..1088880 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhd finger domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1083116..1088880 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019787Znf_PHD-finger
IPR001965Znf_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Homology
BLAST of NO06G03880 vs. NCBI_GenBank
Match: EWM26379.1 (phd finger domain protein [Nannochloropsis gaditana])

HSP 1 Score: 323.2 bits (827), Expect = 4.900e-84
Identity = 173/347 (49.86%), Postives = 205/347 (59.08%), Query Frame = 0
Query:  819 MKRNLRPARKVFRMMKEGWEGGRXXXXXXXXDREVVRKYEAMMMEKKRKEEAGE--EG-REGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVP----SLLLAPSPKKCALCATSGGAMRRT------GXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMYHGGRFGANSWVALCEAHTDAARFMGVRWAVG 1153
            M+RNL PAR ++R M   +EGG+        +R+VV +YE  + ++KRKE  G+  EG +EG EE   ECAVCHR+EAGGRNS+VFCD CNMAVHTFCYCV+SLPAG+WHCQ CEA LE E G                      S LLAP PK+C LCAT+GGAMR+                              EEWAHVECCRWLG++DGRTGEIP L PRL+ALRRH+  + TA   +        D    +PSSL            DY C V  CP PH GGLLRCS P C SFFH  CGRRN QEMYHG RFG  +W+A C+ HTD  RF+ +   VG
Sbjct:    1 MRRNLAPARVLYRKMVAAFEGGKSAFGRRRKERDVVARYETALEDRKRKEGGGDGREGEKEGAEETMTECAVCHRTEAGGRNSLVFCDGCNMAVHTFCYCVHSLPAGAWHCQVCEAGLECEVGGXXXXXXXXXXXXXXXXXXDYVSPLLAPPPKRCMLCATAGGAMRKAKNGSKKRRRPGADGKAMQADAQAPREGGEEEWAHVECCRWLGMIDGRTGEIPHLKPRLQALRRHHMREYTAAEKAASGDAGHGDGPFCSPSSLPTI---------DYKCHVQFCPCPHQGGLLRCSSPGCFSFFHATCGRRNGQEMYHGRRFGDRAWLAFCDLHTDPLRFVEIMTKVG 338          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_011609652.1 (PREDICTED: protein Jade-2 [Takifugu rubripes])

HSP 1 Score: 77.4 bits (189), Expect = 4.700e-10
Identity = 61/268 (22.76%), Postives = 88/268 (32.84%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121
            V+ + E+   EK R+    EEG     +  + C VC   E    N +VFCD+CN+ VH  CY +  +P G+W C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P           +      C   HTG  ++CS+PSC   FHV C   NN EM
Sbjct:  163 VLVELESTCEEKMRQAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPRGNWLCRTCALGVQ------------------------------PKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKVSHIPASRWALSCSLC-REHTGTCIQCSMPSCIVAFHVTCAFENNLEM 338          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: CAE30494.1 (TPA: putative Jade2 protein, partial [Takifugu rubripes])

HSP 1 Score: 76.6 bits (187), Expect = 8.000e-10
Identity = 61/268 (22.76%), Postives = 88/268 (32.84%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121
            V+ + E+   EK R+    EEG     +  + C VC   E    N +VFCD+CN+ VH  CY +  +P G+W C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P           +      C   HTG  ++CS+PSC   FHV C   NN EM
Sbjct:  113 VLVELESTCEEKMRQAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPRGNWLCRTCALGVQ------------------------------PKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKVSHIPASRWALSCSLC-REHTGTCIQCSMPSCIVAFHVTCAFDNNLEM 288          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: PIK41560.1 (hypothetical protein BSL78_21587 [Apostichopus japonicus])

HSP 1 Score: 75.9 bits (185), Expect = 1.400e-9
Identity = 63/249 (25.30%), Postives = 88/249 (35.34%), Query Frame = 0
Query:  872 EEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121
            EEG     +  I CAVC   ++   N +VFCD+C++ VH  CY V  +P GSW C+ C   L+ E                              C LC   GGAM+ T                        +WAHV C  W+  V    G++  + P  K  +             +PPS  A                          C +  C    TG  ++CSV +C + +HV CG   + EM
Sbjct:  176 EEGLGIEYDEDICCAVCRAPDSEDGNEMVFCDKCDICVHQACYGVIKIPEGSWMCRCCALGLQPE------------------------------CMLCGKKGGAMKST--------------------RSGTKWAHVNCALWIPEVS--IGDVERMEPITKISQ-------------IPPSRWA------------------------LICNL--C-RERTGACIQCSVKTCKTAYHVTCGVEQSLEM 332          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_002179027.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49725.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 75.5 bits (184), Expect = 1.800e-9
Identity = 63/220 (28.64%), Postives = 94/220 (42.73%), Query Frame = 0
Query:  801 EDEVLAQLLELQEELVSTMKRNLRPA-RKVFRMMKEGWEGGRXXXXXXXXDREVVRKYEAMMMEKKRKE--EAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGL 1018
            +DE+L  LL  +++L    + N  PA R + R + E              + E    YE   M ++RKE  +A E+ RE  +++   C +C+  E    N I+FC+ CN+AVH FCY +  +PAG ++C AC               R  G+ +    P    AP P +C LC    GA  RT                        +W H+ C +W GL
Sbjct:  838 DDEILRHLLSKKKQL-EEFEGNFEPALRSILRKIVEERTVYESPETVEQRNEEKNILYENKRMLQRRKEMDKAVEKQRE--QDMDAVCDICNDGEVTPDNQILFCEACNVAVHQFCYGIERIPAGDYYCLAC---------------RYLGRDKLDSAP----APLPIRCELCCKKEGAYIRTAAKSDDVSLATFG-----------KWVHMVCAKWQGL 1024          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: AAH97813.1 (LOC733278 protein, partial [Xenopus laevis])

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9
Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122
            V+ + E +  E        EEG     +  + C VC   E    N +VFCD+CN+ VH  CY + ++P GSW C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P        P  +      C    TG  ++CS+PSC + FHV C   +N EM+
Sbjct:  169 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 345          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107505.1 (PREDICTED: protein Jade-2 isoform X3 [Xenopus laevis] >OCT88318.1 hypothetical protein XELAEV_18016951mg [Xenopus laevis])

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9
Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122
            V+ + E +  E        EEG     +  + C VC   E    N +VFCD+CN+ VH  CY + ++P GSW C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P        P  +      C    TG  ++CS+PSC + FHV C   +N EM+
Sbjct:  170 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 346          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107503.1 (PREDICTED: protein Jade-2 isoform X1 [Xenopus laevis])

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9
Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122
            V+ + E +  E        EEG     +  + C VC   E    N +VFCD+CN+ VH  CY + ++P GSW C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P        P  +      C    TG  ++CS+PSC + FHV C   +N EM+
Sbjct:  170 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 346          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: XP_018107504.1 (PREDICTED: protein Jade-2 isoform X2 [Xenopus laevis])

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9
Identity = 59/269 (21.93%), Postives = 88/269 (32.71%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEMY 1122
            V+ + E +  E        EEG     +  + C VC   E    N +VFCD+CN+ VH  CY + ++P GSW C+ C   ++                               KC LC   GGA++ T                        +W HV C  W+                                         P+ +   P  ++P        P  +      C    TG  ++CS+PSC + FHV C   +N EM+
Sbjct:  169 VLEEMEILCFENMNVAIETEEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILNVPTGSWLCRCCALGVQ------------------------------AKCLLCPKRGGALKPT--------------------RSGTKWVHVSCALWI-----------------------------------------PEVSIGCPEKMEPITKISHIPPSRWALSCSLC-RECTGTCIQCSMPSCITAFHVTCAFDHNLEMH 345          
BLAST of NO06G03880 vs. NCBI_GenBank
Match: PVD35229.1 (hypothetical protein C0Q70_06510 [Pomacea canaliculata])

HSP 1 Score: 74.7 bits (182), Expect = 3.000e-9
Identity = 59/268 (22.01%), Postives = 88/268 (32.84%), Query Frame = 0
Query:  853 VVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCATSGGAMRRTGXXXXXXXXXXXXXXXXXXXXXXEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLDPXXXXXXXXPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM 1121
            V+ + E    EK       EEG     +  + C VC   E+   N +VFCD C++ +H  CY + S+P GSW C+ C   ++                               +C LC  +GGAM+ T                        +WAHV C  W+                                         P+ +   P  ++P        P  +      C     G  ++CSV +C + FHV CG +N  EM
Sbjct:  204 VMEELENQCHEKMTAVMKTEEGLGIEYDEDVVCDVCRSPESEDTNEMVFCDGCDICIHQACYGIQSIPEGSWLCRTCALGIK------------------------------PRCILCPKTGGAMKST--------------------RSGTKWAHVSCALWI-----------------------------------------PEVSIGVPEKMEPITKISNIPPSRWGLCCNLC-KERVGACIQCSVKTCKTAFHVTCGFQNGLEM 379          
The following BLAST results are available for this feature:
BLAST of NO06G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26379.14.900e-8449.86phd finger domain protein [Nannochloropsis gaditan... [more]
XP_011609652.14.700e-1022.76PREDICTED: protein Jade-2 [Takifugu rubripes][more]
CAE30494.18.000e-1022.76TPA: putative Jade2 protein, partial [Takifugu rub... [more]
PIK41560.11.400e-925.30hypothetical protein BSL78_21587 [Apostichopus jap... [more]
XP_002179027.11.800e-928.64predicted protein [Phaeodactylum tricornutum CCAP ... [more]
AAH97813.13.000e-921.93LOC733278 protein, partial [Xenopus laevis][more]
XP_018107505.13.000e-921.93PREDICTED: protein Jade-2 isoform X3 [Xenopus laev... [more]
XP_018107503.13.000e-921.93PREDICTED: protein Jade-2 isoform X1 [Xenopus laev... [more]
XP_018107504.13.000e-921.93PREDICTED: protein Jade-2 isoform X2 [Xenopus laev... [more]
PVD35229.13.000e-922.01hypothetical protein C0Q70_06510 [Pomacea canalicu... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000090NSK000090Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G03880.1NO06G03880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125787gene_6718Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100031g33gene4146Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G03880.1NO06G03880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G03880 ID=NO06G03880|Name=NO06G03880|organism=Nannochloropsis oceanica|type=gene|length=5765bp
ACACTTGTCTGAGCTAGGCTACCTTCGTATCAAAAATGCCTTTCTGACTT
CGGCCCATTTCTCCTCGTTACTCTTTCAGCTATTCCGCGCCATCATGCCT
TCTTTTTCCTGGTCTTGGTGCCTTGTCGCTTTGCGCGCGCCCTCTTATGT
CCGAGCATGCCTAGTCCCCGAAATCAAGGCATAAATTGCACAGCACGCTG
CACTGTATGCTGTTCCTTGGATTTGGCTGATTAGGGCCGCAGACCGGAGC
CGTTGCTTCGGACACGCGAGCCTTCTTCCCGCGTGCGGCATCCCATGCCT
CGCTTCTTGCTTTCCGTACACTACAGGCACATGCCATTCCCACACACCAC
CTAATTATCCCTATATATAGACAGACGTGCGCGACATTGCCAAGCCAAGG
TAAGACTCCAGGAGGTGTACAGATATCCCTCGGTTCCACGGGCGAGGAGA
GAGTGCAGGGAGCAGCAGCAGAAGAGCCCGAAGCAATATGAGCAGCAGAC
AAGACGTGGGCGGGGGCAAAGCCTCATCACAGGAAGAAGAGGAGGAGGAA
GGAGAGGAGGAGGAAGAGGACAAAAAAGGCAATCTTGACAGTGATCGGCC
GATAGAGTCACGTGAGAATGAGGGAGATGGTGTTGAGGAAGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAA
GATGAGGATGGAGAGGAGGAGGAGGAGGAGGAGGAGGGGGAAGGGGGCAG
TGACGGTGCCGAGGTTGATGAGGAGAACAACGGGGACAACAACTCCGACG
ATAATGAAGGAGAGAAGGGGGAAGAAGCGCAGTCCATACGTGCTCGGTCG
GGGCGGGCCACGTCTGTGAAGAGCTACAAGGATCTTAATACTAGTGGCAA
GCCCTCCAGATCCCCTCTGAAAGCCGGGCAAATTGGAGGAGGAGGAGGAG
GAGGAAAAGAAGGAGAAGACAAGAAAGTAGGTGATGGAGGACAAATGAGC
AGCAAGGAGGAGTATGAAGCGGCGAAGCGGGCCAAAAAGGCCGCGGCAAT
GAGGGAGCAACGGCGGTTGCGGGCGTTGGCCTTGGAAGCATCGGGAAAAA
AGAAGAAGAAACGGGGGAAAAAGCAACAGCTTTTGCTAGGGGCAGGAGGA
AAGAAAGGGACAAGCATGCTTCAATTACGGACACCGAAAAATTTCCGGAA
ATTGAACAAAAAGCGACAGCTGGCGGTGCTTCGGAAGTTGGAGGAGGAGC
AACTGCAGCTTGGAGGGATGGAGGAAAGAGGGGGTGGGGGAGGGGGAGAT
AGGGCTGCACAAGTGGAAGGAGGGGCAGAGGGAGGGGAGGGAAACCAGCA
TCAGAAGGGCCTCGCGAACTTGGTCCGTGTTGCCGAGTCACAAGAAGAAG
TGGATGCTGCCCTGGTGCTGGACGAAGACTATAAGCCCATGTTCGAGGGA
GGGGTTGTGGCTTGGGAGCGATTGCACTTGCCGCGCTTGCCCATGATTCC
GATGGGTCCCATGCGCATTGGGGAGAACTTGTACGCGTATTTGAGTGGAT
CCATGTGGGATTTTGCCAGCGCCTGGTGCTGGCACCTGGGGCCGGTGGCG
GCGGGGAAGGTGTTGGGGGAGGTGGTGAGGAAAAGAGAGGAGGAGGCAGA
GGAGGGAGGGGGGAGGACGAGGAAAAGTGGGAAGGACCGACGGCGGTGGA
GGATCCGGCGATGGTCATCCCGCCATTGGGAACCGTTTACAAGCGGAGGA
AGCGGGGAAGTGACTACCCGGAGTGGGGGGAGGAAGGAAGGGAGGgtgag
gacggaagggagggcgatggggaggacgcgtgtccggcagacttaggtga
gctgggggcattacgtgcgctgtggatattgatgccgagggaagagtgtt
ctccctccctccctctatcggcgcgtgaatcccggcagCGCAAGCCGACG
GGAGCAGCGGCAACAGCAGCAGCAGCAGCGGGAGCGGCAGCAGCAGCCGC
TACGGCGGATGCAAAGAAGGAAGGGAAAGAAGAAAAGGAGAAGGGCAAGC
TAAATGAGATGGAGGGAGGGGAAGGAGGCGAAAAGGAGGAGGGTACACGG
CTTTGTCGAAACGAGAGATCGTTGGCGATTAAGAAAAGAGAGGGTGGCCG
CGTTTTTGTGCCGTGCCTGAGGCTACGGGCAGTGGTGGAGGAAGGGAAGG
AGGGAGGCTTTCGCCTATCCCTGCGGTGTGTATCGTCGTCTACTGCGATT
TCGGGTCCGGATGAGGGGGAGGAGGAGGCAGCAGCAGCACGCATGGAACG
AGAGCTGGAGGGAGTGGAGGAGGAGTTGCTCGAGTACCAGCAGCTTGACA
GCCTGTCGTTCGCAGGCCACCTTCCTTCCCTCCCTCCTTCTGCGTCACTG
TCTCTTCTTCCTCGTTCTCCGCCTCCTGCGGAGACCAGGGGTAGGAAGGC
GAAAGGCAAAAAGGGGAAGAAGGAGGAGGAAGAGGAGGACGGCGCGGAGG
CCAGCAAACTACCCTGTCTTCCTCTCCCTCCCACCGAGGGCCGTCTCCTC
CGTTTTTGGGAAACGGGACTTCTCGGTCCCGGTCGACAAGACAATAAAAG
AGAGGTCGCGGAAGAGGCTAGAGGCGCCGTCCTCCCTCTCTCCTTGCCTT
CCTCCCTCTTCTCCAGCGATTTCTCTCCCTCCGTCATCGCTGAAGCCAGT
TTCAGCGTCCCCAAGCCCCCCCCCTCCATTTCAGCCTCCTCCTCGTGCTT
CACCTCCACCCAGCAGCAGCAGCCGCAGCAGCAGCAACAACAACAACAAC
AGCAGCAGCCTACCATTTCCTCCTCTGCCGCCTTCTCCCCCTCCCACCCC
TCCGTCCCTGCAACCGCCATCACGGACCCCTATGTCGTTCCTTCTCCCCT
CCCCTCCCCCTCGTCCATACCCTCCTCCCTCCCTCCCACTTCCACATGGG
CTGCCCGACACGTGATCACCCCCGGGGCCGACGCGGACAAAATTCGCAGA
AACAAGAAGAGGCAGCATCCGGAGGTAGGGGAGGACGAGGTGTTGGCACA
GCTGCTGGAGTTACAGGAGGAGCTGGTGAGCACAATGAAAAGGAACCTCC
GGCCGGCGAGAAAAGTGTTTAGGATGATGAAAGAGGGGTGGGAGGGAGGG
AGGGAGGGGTGGAAGAGGAGGAGGGAGGACAGGGAGGTGGTGAGGAAATA
TGAGGCGATGATGATGGAGAAAAAGAGGAAGGAGGAAGCGGGTGAGGAAG
GGAGGGAGGGGCTGGAGGAGGTGACGATTGAGTGTGCGGTGTGTCATCGG
TCAGAGGCGGGAGGTAGAAATAGTATCGTGTTTTGTGACCGATGCAACAT
GGCGGTACATACCTTTTGCTATTGCGTGTACTCCCTCCCGGCCGGGTCGT
GGCACTGCCAAGCGTGCGAGGCAGCGCTGGAAGAGGAAGATGGGAAGGAG
GAGGTAGAGGAGAGGGGCCGGGGAAAAGGGGAAGCGGTGATGGTTCCATC
CTTGTTGTTGGCTCCGTCCCCGAAAAAGTGTGCCCTGTGTGCGACCTCTG
GAGGCGCGATGAGAAGGACGGGGGGGAGGAGAGGAGGGAAGAAGAGAGGG
AGGAAGGAGGAGCGTGGGAAGGAGGGCGGGAAGGAGGAGGAGGAATGGGC
GCATGTGGAGTGCTGCCGGTGGTTGGGGTTAGTGGATGGGAGGACGGGTG
AGATACCTACCCTCGGTCCGCGCCTCAAGGCCCTCCGCCGTCACTATTGT
CTTCAAGCTACAGCTGTCCCTCTCTCCCTTCCTCCCTCCCCCACCGCTCC
CGATGCCACTGGCGCCGCACCCTCCTCTCTCGATCCTCCCTCCTCCTCTT
CCTCCACCTCCCCGCCGGACTATCATTGCGGAGTGTACGCTTGCCCCTCC
CCCCACACAGGGGGTCTGCTCCGGTGCTCCGTGCCCTCGTGCCCCTCCTT
CTTCCATGTGGCCTGCGGTCGGCGGAACAACCAGGAGATGTATCACGGGG
GGAGGTTTGGAGCCAATTCGTGGGTCGCCCTGTGCGAGGCACACACGGAT
GCCGCCCGCTTTATGgtgactgtggcggcagtggaggcgagttatgagcc
aagcagcaaggaggtggaggactcgaacagGGCGTTCGATGGGCTGTGGG
AGAGGGAGGCGGAGGAGGAGGAGGAGCGAAGGAGAAGCAGGGAGGGATGG
GCTCAGAAAACACTGCCAAAGTTGGAGGGGGGAGGAATGGAGGGAGGGAG
GAGGGGTACAGACGGTTTAGGAGGGCGGTGGGAGAGGAGGAGAGGAGGGA
GAGGGAGGTGGAGGAGAGGAGGGAAAGGGAGGAGGAGGAGGCGAGGAAGG
CGCAGGAGGAGTACAATGCCTCGGTTTCTGCGGCGGCGACATTGCAGTAT
CAGCAGCAGGTGCAGCAGCATCGGCAGCAGCAGCAGATGATGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGC
GGCAGGAAGGAGCAGGAGGAGGAATGTTGGCACATTTTCCTCCACACGCA
GCAGCAGCTGGTGGTGGTGGTGATGGTGGTAGCGGCGATTGTCCTCCTCC
CTTCATGCCGCCTTTTGCCATGGGCCCCGTGCGCCTGGGCGAGTCCATGG
CAGCAGCTCTCGGGAGCCCCCTCCCTCCTCACTCCTTCCCTCCCCCTCCC
CTGCTTCCCCATTCGTCCTCCTTCGCCGTGCCTCCGCACCCGTTGTTGTC
GCAGTATTCTGGAAGAGGAGAAAGAGGGGGAGGAGTAGGGGTGGTCAGCC
CTTCCTCCTCTTATGCGCCTCTTCCTCCCTTCCCTCCTCCCTCTTTCTCG
GGAAGGACGGAGACGAAGGCGGGAAAGCTGACCAAGAAGCAGCGAGAGCA
GGAGCTGGGGCGGGTCCTCCACCAATTCCATATTCCTCTCCCCCCCTCCC
TCTTTCCCCCCCTTTCCTCTGCCAACGAAGAAGGAGAAGTAGATGGAGAG
GGGGAGGGCATGGTGGGGGAGGATGGGAAGAAGAAAAAGCAGAAGACGAA
GGGGAAGATCAAGGCAGGTGGCGCCTCCATCGAAAAATGGATTAGAAGTC
AATTTGCTTTGTTTCCTGTGGAGGTCCAGCACGCCCTGGCGGGTGTGGAC
GAGAAATTGATGGGGAAATTGTATGGGAGGGAGGAAGGGAGGGAGGGAGG
GCGGGGGCACGGGCCAGCGCAAGGCCCTCCCCTTCCTCCGTCCTTGTTGA
TGGCTCTGCCGCCAGGAATGAGGAGTGGAGGAGGAGGAGGTGGAATTGGA
GAAGGGAGAGAGGGACGGCCGTTTGGAATGCGTGTTTTCCCGCCTTCGCC
ACCCCCCGGAGCTCCGCAGCTCGCGATGATGAGTGGTGGCAGCACCGCTG
GGAATAGCCGTGGTGAGGGAGAGGGAGGGAGGAAGGGAGGGGAAGGACCG
GCCAATGAGCATCAGAACTCGAATTGGAAGGTGCAGGGCAATGCCAGGGA
GGGAGGAAGGGAGGGAGGGGGAATAGAAGGACAAGGAGGTGGAGATGGTC
GTAATGGCGGGCAGGAGGAGGGGAGGCAGCAAGAGGGAGGAGAAGGAGGA
GGACGAGGACGAGGGGAGGGAGATTCCATCCCTTACAAAGCTACTGGTGT
CGAGAAGGCTAAATCTGCATCCGACCTAGCAGCAGCAGGAAATGGGGCAG
GAGGACCTATGGCGAAACCACCCAGCCCTTCCAAGGGTTCATATACGGAC
GTAATGACGATTTAG
back to top

protein sequence of NO06G03880.1

>NO06G03880.1-protein ID=NO06G03880.1-protein|Name=NO06G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1690bp
MSSRQDVGGGKASSQEEEEEEGEEEEEDKKGNLDSDRPIESRENEGDGVE
EEEEEEEEEEEEEEEEEEEEEDEDGEEEEEEEEGEGGSDGAEVDEENNGD
NNSDDNEGEKGEEAQSIRARSGRATSVKSYKDLNTSGKPSRSPLKAGQIG
GGGGGGKEGEDKKVGDGGQMSSKEEYEAAKRAKKAAAMREQRRLRALALE
ASGKKKKKRGKKQQLLLGAGGKKGTSMLQLRTPKNFRKLNKKRQLAVLRK
LEEEQLQLGGMEERGGGGGGDRAAQVEGGAEGGEGNQHQKGLANLVRVAE
SQEEVDAALVLDEDYKPMFEGGVVAWERLHLPRLPMIPMGPMRIGENLYA
YLSGSMWDFASAWCWHLGPVAAGKVLGEVVRKREEEAEEGGGRTRKSGKD
RRRWRIRRWSSRHWEPFTSGGSGEVTTRSGGRKEGRRKPTGAAATAAAAA
GAAAAAATADAKKEGKEEKEKGKLNEMEGGEGGEKEEGTRLCRNERSLAI
KKREGGRVFVPCLRLRAVVEEGKEGGFRLSLRCVSSSTAISGPDEGEEEA
AAARMERELEGVEEELLEYQQLDSLSFAGHLPSLPPSASLSLLPRSPPPA
ETRGRKAKGKKGKKEEEEEDGAEASKLPCLPLPPTEGRLLRFWETGLLGP
GRQDNKREVAEEARGAVLPLSLPSSLFSSDFSPSVIAEASFSVPKPPPSI
SASSSCFTSTQQQQPQQQQQQQQQQQPTISSSAAFSPSHPSVPATAITDP
YVVPSPLPSPSSIPSSLPPTSTWAARHVITPGADADKIRRNKKRQHPEVG
EDEVLAQLLELQEELVSTMKRNLRPARKVFRMMKEGWEGGREGWKRRRED
REVVRKYEAMMMEKKRKEEAGEEGREGLEEVTIECAVCHRSEAGGRNSIV
FCDRCNMAVHTFCYCVYSLPAGSWHCQACEAALEEEDGKEEVEERGRGKG
EAVMVPSLLLAPSPKKCALCATSGGAMRRTGGRRGGKKRGRKEERGKEGG
KEEEEWAHVECCRWLGLVDGRTGEIPTLGPRLKALRRHYCLQATAVPLSL
PPSPTAPDATGAAPSSLDPPSSSSSTSPPDYHCGVYACPSPHTGGLLRCS
VPSCPSFFHVACGRRNNQEMYHGGRFGANSWVALCEAHTDAARFMGVRWA
VGEGGGGGGGAKEKQGGMGSENTAKVGGGRNGGREEGYRRFRRAVGEEER
REREVEERREREEEEARKAQEEYNASVSAAATLQYQQQVQQHRQQQQMMQ
QQQQQQQQQQQQQQQQQRRQEGAGGGMLAHFPPHAAAAGGGGDGGSGDCP
PPFMPPFAMGPVRLGESMAAALGSPLPPHSFPPPPLLPHSSSFAVPPHPL
LSQYSGRGERGGGVGVVSPSSSYAPLPPFPPPSFSGRTETKAGKLTKKQR
EQELGRVLHQFHIPLPPSLFPPLSSANEEGEVDGEGEGMVGEDGKKKKQK
TKGKIKAGGASIEKWIRSQFALFPVEVQHALAGVDEKLMGKLYGREEGRE
GGRGHGPAQGPPLPPSLLMALPPGMRSGGGGGGIGEGREGRPFGMRVFPP
SPPPGAPQLAMMSGGSTAGNSRGEGEGGRKGGEGPANEHQNSNWKVQGNA
REGGREGGGIEGQGGGDGRNGGQEEGRQQEGGEGGGRGRGEGDSIPYKAT
GVEKAKSASDLAAAGNGAGGPMAKPPSPSKGSYTDVMTI*
back to top
Synonyms
Publications