jgi.p|Nanoce1779_2|125787, gene_6718 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|125787
Unique Namegene_6718
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:532913..538816 +

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Properties
Property NameValue
TranscriptId125873
ProteinId125787
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:532913..538816 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03880NO06G03880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125787mRNA_6718-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|125787mRNA_6718Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|125787

>mRNA_6718-protein ID=mRNA_6718-protein|Name=jgi.p|Nanoce1779_2|125787|organism=Nannochloropsis oceanica|type=polypeptide|length=1736bp
MSSRQDVGGGKASSQEEEEEEGEEEEEDKKGNLDSDRPIESRENEGGGEE
EDEDGEEEEEEEEEGEGGSDGAEVDEENNGDNNSDDNEGEKGEEAQSIRA
RSGRATSVKSYKDLNTSGKPSRSPLKAGQIGGGGGGGKEGEDKKVGDGGQ
MSSKEEYEAAKRAKKAAAMREQRRLRALALEASGKKKKKRGKKQQLLLGA
GGKKGTSMLQLRTPKNFRKLNKKRQLAVLRKLEEEQLQLGGMEEGGGGGG
GDRAAQVEGGAEGGEGNQHQKGLANLVRVAESQEEVDAALVLDEDYKPLF
EGGVVAWERLHLPRLPMIPMGPMRIGENLYAYLSGSMWDFASAWCWHLGP
VAAGKVLGEVVRRREEEAEDGGGEDEEKWEGPTAVEDPAMVIPPLGTVYK
RRKRGSDYPEWGEEGREGEDGREGDGEDACPADLGELGALRALWILMPRE
ECSPSLPLSARESRQRKPTGAAATAAAAAGAAAAAATADAKKEGKEEKEK
GKLNEMEGGEGGEKEEGTRLCRNERSLAIKKGEGGRVFVPCLRLRAVVEE
GKEGGFHLSLRCVSSSTAISGPDEGEEEAAAARMERELEGVEEELLEYQQ
LDSLSFAGHLPSLPPSASESLLPRSPPLAETRGRKAKGKKGKKEEEEEDG
AEASELPCLPLPPTEGRLLRFWETGLLGPGRQDNKREVAEEARGAVLPLS
LPSSLFSSDFSLSVIAEASFSVPKPPPSISASSSCFTSSQQQQPQQQQQQ
QQQQQPTISSSAAFSPSHPSVPATAITDPYVVPSPLPSPSSIPSSLPPTS
TWAARHVITPGADADKIRRNKKRQHPEVGEDEVLAQLLELQEELVSTMKR
NLRPARKVFRMMKEGWEGGREGWKRRREDREVVRKYEAMMMEKKRKEEAG
EEGREGLEEVTIECAVCHRSEAGGRNSIVFCDRCNMAVHTFCYCVYSLPA
GSWHCQACEAALEEEDGKEEVEERGRGKGEAVMVPSLLLAPSPKKCALCA
TSGGAMRRTGGGRGGKKGGRKEEREKEGGKEEEEEWAHVECCRWLGLVDG
RTGEIPTLGPRLKALRRHYCLQATAVPLSLPPSPTAPDATGAAPSSLVPP
SSSSSTSPPDYHCGVYACPSPHTGGLLRCSVPSCPSFFHVACGRRNNQEM
YHGGRFGANSWVALCEAHTDAARFMVTVAAVEASYEPSSKEVEDSNRAFD
GLWEREAEEEEERRRSREGWAQKTLPKLEGGRNGGREEGYRRFRRAVGEE
ERREREVEERREREEEEGRKAQEEYNASVSAAATLQYQQQVQQHRQQQQM
MQQQQQQQQQQQQRRQEGAGGGMLAHFPPHAAAAAAGGDGGSGDCPPPFM
PPFAMGPVRLGESMAAALGSPLPPHSFPPPPLLPHSSSFAVPPHPLLSQY
SGRGERGGGVGVVSPSSSYAPLPPFPPPSFSGGTETKAGKLTKRQREQEL
GRVLHQFHIPLPPSLFPPLSSANEEGEVDGDGEGMVGEDGKKKKQKTKRK
IKAGGASIEKWIRSQFALFPVEVQHALAGVDEKLMGKLYGREEGREGGRG
HGPAQGPPLPPSLLMALPPGMRSGGGGGGIGEGREGRPFGMPVFPPSPPP
GAPQLAMMSGGSTAGNSRGEGEGGRKGGEGPANEHQNSNWKVQGNAREGG
REGGGIEGQGGGDGRNGGQEEGRQQEGGEGGGRGRGEGDSIPYKATGVEK
AKSASDLAAAGNGAGGPMAKPPSPSKGSYTDVMTI*
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Synonyms
Publications