NO06G02860, NO06G02860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02860 vs. NCBI_GenBank
Match: EWM26300.1 (ubiquinone biosynthesis protein coq7 [Nannochloropsis gaditana]) HSP 1 Score: 208.4 bits (529), Expect = 2.800e-50 Identity = 99/137 (72.26%), Postives = 116/137 (84.67%), Query Frame = 0 Query: 111 TPHAPPVFDWVALDEEKKMWSDYDNNYEAALVQDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 +P PP FDW+ L+EEKK+W D+++N EA LVQDLRS+HAGETGAV+IYAGA+AAMK G RFS + AFV H+ATE+EHLA+F+RLLD MKSKLLP WR+SGWCLGFFPTL+GGE ALFLTVEAVETFVE HY Sbjct: 105 SPPQPP-FDWIGLEEEKKIWGDFESNGEAVLVQDLRSDHAGETGAVYIYAGAQAAMKWGGGGRFSAESRAFVQTHHATESEHLAYFERLLDPGMKSKLLPFWRISGWCLGFFPTLLGGESALFLTVEAVETFVEAHY 240
BLAST of NO06G02860 vs. NCBI_GenBank
Match: OYV68416.1 (ubiquinone biosynthesis protein COQ7 [Acidiphilium sp. 21-60-14] >OYV88960.1 ubiquinone biosynthesis protein COQ7 [Acidiphilium sp. 37-60-79] >OZB37938.1 ubiquinone biosynthesis protein COQ7 [Acidiphilium sp. 34-60-192]) HSP 1 Score: 103.6 bits (257), Expect = 9.700e-19 Identity = 56/107 (52.34%), Postives = 66/107 (61.68%), Query Frame = 0 Query: 141 LVQDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 LV DLRS+HAGETGAV IY G A + P F EH A+E EHLA LL +S LLPLWRV+GW GF P LVG A++ T++AVETFV+ HY Sbjct: 28 LVGDLRSDHAGETGAVAIYLGILAVSR-------DPKVRQFAQEHLASEREHLARMGELLPPGQRSVLLPLWRVAGWLTGFLPALVGPH-AVYATIDAVETFVDHHY 126
BLAST of NO06G02860 vs. NCBI_GenBank
Match: XP_001749524.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85575.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 101.7 bits (252), Expect = 3.700e-18 Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 0 Query: 105 PSNPTLTPHAPPVFDWVALDEEKKMWSDYDNNYEAALVQDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 P+ P TP D+ A E D + LVQ LRS+HAGE AV+IY GA+ A +L G FV +H TE HL +F+ LL+ + +S L P+W V+G+ LGF PTL G AL+ T+ AVET+VEEHY Sbjct: 44 PTRPLPTPFPVSPNDFAAAMAE----MDQVRREDPWLVQALRSDHAGELAAVYIYRGARDAARL---RPLPEGVHHFVNQHLETERGHLHYFETLLERRERSWLSPVWLVAGYALGFLPTLAGPH-ALYTTIHAVETYVEEHY 178
BLAST of NO06G02860 vs. NCBI_GenBank
Match: WP_082901827.1 (demethoxyubiquinone hydroxylase family protein [Leptolyngbya valderiana]) HSP 1 Score: 100.9 bits (250), Expect = 6.300e-18 Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 0 Query: 144 DLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 DLRS+ AGETGAVWIY G +A + P +F H +TEAEHL D LL + +S+LLPLWR++GW G P +G + A F TV+AVETFV+ HY Sbjct: 30 DLRSDQAGETGAVWIYRGMLSAAR-------DPVVRSFAERHLSTEAEHLRLIDGLLPRRARSRLLPLWRLAGWITGALPAALGAQ-AAFATVQAVETFVDRHY 125
BLAST of NO06G02860 vs. NCBI_GenBank
Match: EEB78066.1 (hypothetical protein GPB2148_2698 [marine gamma proteobacterium HTCC2148]) HSP 1 Score: 100.1 bits (248), Expect = 1.100e-17 Identity = 51/108 (47.22%), Postives = 69/108 (63.89%), Query Frame = 0 Query: 140 ALVQDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 A+ +DLRS+HAGETGAV+IY G + + F EH ATE HL F++ L +KS+L+PLW+++GW LG +L+GG +FLT+EAVETFV HY Sbjct: 40 AVQRDLRSDHAGETGAVFIYRGILSCTR-------DSALREFATEHLATEQRHLVFFEQWLPASLKSRLIPLWKLAGWLLGAL-SLLGGRRGVFLTIEAVETFVVAHY 139
BLAST of NO06G02860 vs. NCBI_GenBank
Match: OYV52807.1 (ubiquinone biosynthesis protein COQ7 [Rhodospirillales bacterium 20-60-12]) HSP 1 Score: 99.8 bits (247), Expect = 1.400e-17 Identity = 54/107 (50.47%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 141 LVQDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 L+ D+RS+HAGETGAV IY G A P AF H ATE +HL D LL +S LLPLWRV+GW GF PTL G A++ T++AVETFV+ HY Sbjct: 20 LIGDIRSDHAGETGAVMIYRGILAGTA-------DPVLRAFAQTHMATEQKHLDLLDGLLRPDQRSLLLPLWRVAGWLTGFLPTL-AGSLAVYATIDAVETFVDHHY 118
BLAST of NO06G02860 vs. NCBI_GenBank
Match: GAP38762.1 (hypothetical protein ISF6_5315 [Ideonella sakaiensis]) HSP 1 Score: 98.6 bits (244), Expect = 3.100e-17 Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 0 Query: 145 LRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 LR++HAGETGAV IY G A + P AF AEH ATEA HLA D + + +S+LLP WR++GW G P L G+ A+ TV+AVETFV+ HY Sbjct: 126 LRTDHAGETGAVMIYRGVLAVTR-------DPALRAFAAEHLATEARHLAEMDATVPARWRSRLLPCWRLAGWLTGALPAL-AGQRAVHATVQAVETFVDRHY 220
BLAST of NO06G02860 vs. NCBI_GenBank
Match: WP_054022606.1 (DUF393 domain-containing protein [Ideonella sakaiensis]) HSP 1 Score: 98.6 bits (244), Expect = 3.100e-17 Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 0 Query: 145 LRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 LR++HAGETGAV IY G A + P AF AEH ATEA HLA D + + +S+LLP WR++GW G P L G+ A+ TV+AVETFV+ HY Sbjct: 145 LRTDHAGETGAVMIYRGVLAVTR-------DPALRAFAAEHLATEARHLAEMDATVPARWRSRLLPCWRLAGWLTGALPAL-AGQRAVHATVQAVETFVDRHY 239
BLAST of NO06G02860 vs. NCBI_GenBank
Match: AKO54235.1 (conjugal transfer protein [Marinobacter psychrophilus]) HSP 1 Score: 98.2 bits (243), Expect = 4.100e-17 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 143 QDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 Q+LR +HAGETGAVWIY G AA G+ F EH TE +HL FD L +S +LPLWR++G+ GF P+L+ G+ A+F T+EAVETFV+ HY Sbjct: 20 QELRCSHAGETGAVWIYRGILAARPTGA-------LLEFAREHLQTEQQHLGMFDDLSVCYRRSLILPLWRLAGFLTGFLPSLI-GKNAVFATIEAVETFVDLHY 116
BLAST of NO06G02860 vs. NCBI_GenBank
Match: WP_053076131.1 (conjugal transfer protein [Marinobacter psychrophilus]) HSP 1 Score: 98.2 bits (243), Expect = 4.100e-17 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 143 QDLRSNHAGETGAVWIYAGAKAAMKLGSPSRFSPGASAFVAEHYATEAEHLAHFDRLLDMQMKSKLLPLWRVSGWCLGFFPTLVGGEPALFLTVEAVETFVEEHY 248 Q+LR +HAGETGAVWIY G AA G+ F EH TE +HL FD L +S +LPLWR++G+ GF P+L+ G+ A+F T+EAVETFV+ HY Sbjct: 25 QELRCSHAGETGAVWIYRGILAARPTGA-------LLEFAREHLQTEQQHLGMFDDLSVCYRRSLILPLWRLAGFLTGFLPSLI-GKNAVFATIEAVETFVDLHY 121 The following BLAST results are available for this feature:
BLAST of NO06G02860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02860 ID=NO06G02860|Name=NO06G02860|organism=Nannochloropsis oceanica|type=gene|length=1457bpback to top protein sequence of NO06G02860.2 >NO06G02860.2-protein ID=NO06G02860.2-protein|Name=NO06G02860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=269bpback to top protein sequence of NO06G02860.1 >NO06G02860.1-protein ID=NO06G02860.1-protein|Name=NO06G02860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bpback to top Synonyms
Publications
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