NO06G02610, NO06G02610 (gene) Nannochloropsis oceanica

Overview
NameNO06G02610
Unique NameNO06G02610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2698
Alignment locationchr6:731420..734117 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:731420..734117 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
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BLAST of NO06G02610 vs. NCBI_GenBank
Match: EWM26278.1 (hypothetical protein Naga_100073g2 [Nannochloropsis gaditana])

HSP 1 Score: 718.8 bits (1854), Expect = 2.000e-203
Identity = 407/813 (50.06%), Postives = 514/813 (63.22%), Query Frame = 0 
Query:    7 KREKTPQEEVKQLHIRRLSLYVAARLVLTQMHFQFLTHNLRQGWSWGWFPMVVYKFLRCCTVLLTFFLQKASVWGCFKSLFDLAFGWLIPHGISAWVSVLLVVIAQGLSMMSRYNCMFGGADCPSVRTALFAAHAVAGLLASAAFLIRAGGPGGEGIYNACEWRHHGTAVVLAGMVSSLLDAWVYDQRGYQSAHGLGPFRRAPPRGRKTHLILARGYDQRLFDLHYFVPGVGSGESEEMRLLEEDMQCGRRSPHSRMLLPHLPPQQKLPSFVSPHSNKWARWAGNHVMRLWFYWENLQGGELVSRVCVGVVGVAMAVWPVEAALGWVGSVVFGEDHHYEILPPSVGSSWQALPTVAWTTVLVLWYVGFSLAGGTLLLCHLVRQPVDFSGFDAGV--GSVGVLQHWLAKGWTVLLRDPGQQRMQQQSELGGLGRRRSDGAPAAAVRGEEMWQVELEDTQRVLYRVAVLANKSVYPPRLTTHSQLARQGVSVTEKLYRAHAFLDLAILAHTNAGRRREVCFREMPRWRDACRPLLMVVNALTLQLELQMEGGGRLEGGTASPMKGMCTRLGLEEPRDGKGLAALIIDSEVQRRMEEVWAKRRRQGRVVTVEEMQKARSEQFHLPAR---LVGGXXXXXXXXXXXXXXILSPLALPMLDLQVVELAASALAGLYRYAVEMVEEGEGGREGGFEDSRGCSRHSIPSVIGALVSCQLAMHLYSYMVLCE------------------GGEEGGAGGTTRKGGVARFQVILDRPSVVLPQLVGVSLAVDDAIEEIVEKYYDSDFATFSFAPLYARCVKM 797
            +R++     V  LH +R+++Y+   L+LT   FQF+   LR G    W   V+ + L CC + L   LQ   V         LA  W++P G   W ++ +V+  Q LS+ SRY+CMFGGA+ P  +T L  +H V+GLL S AFL RAGGPGGEG+ +ACE RHHG AV LAG++S L+DA  Y  RGYQS  G+GPFRR P  GR+  L+LARGYDQ LFDLH+F+ G G     E          G  SPHS ML+P LPP Q LPSF+ P +++WAR  G+  MRL   WE + G EL  R+ +  VGVA +  P E  L    +++FGEDH Y  LPP VGSSWQALP VA+TTV V  Y  F+L   TLLLCHL+RQPVDFS    G   G+  +L  WL KGW V+LR+P   R++  +  GG   RR     A     ++MW+ E+E+TQR+LYR AVLA+ SV+PPRL     ++RQ +  T++LYRA AFLDLAILAH    RRR+ CF++   WR  CRPL+MVVNALTLQ+EL+MEG GR+EGG  SP+K +  RLGL EP +G  LA LI+D+EVQRRMEEVW++RR  G+ +  E++  +   ++ LPA+     G                  PL +P LDLQVVELAASAL  LYR AV +VEE     E  FED RGCSRHSIP+V+G+LV CQLA+HLYS MVLC                    G++ G      +G V RFQVI DRPSVVLPQL GVS+AVD+AIE I+  YY+SD  TFSFAPLYARC+KM
Sbjct:   16 ERKEVSHALVIGLHRKRMTVYIILELILTVGLFQFMASWLR-GRILDWAGSVIVQGLECCHMFLRLRLQSWCVCCLRLGASVLAGSWVMPQGPGDWTALFMVIAGQVLSLSSRYHCMFGGAERPMAKTYLIGSHVVSGLLISGAFLSRAGGPGGEGMLSACELRHHGIAVALAGVLSCLIDALAYYNRGYQSTRGIGPFRRPPSGGRRRRLVLARGYDQDLFDLHHFLSGPGEASQWE---------GGLSSPHSSMLIPDLPPSQSLPSFLGPEASQWARRCGHLWMRLSALWEEMGGRELAGRLLLTSVGVAASAGPAETLLAKASALIFGEDHQYHGLPP-VGSSWQALPKVAFTTVAVAVYGFFTLGRSTLLLCHLLRQPVDFSALGKGERGGAESLLHGWLEKGWAVILREP---RLEHPNRGGG---RRQSAESAFEAPEKDMWRGEMEETQRMLYRTAVLASWSVFPPRLEMF-DVSRQPLGPTDRLYRAQAFLDLAILAHGQVERRRQACFKDRGVWRATCRPLVMVVNALTLQIELEMEGCGRVEGGMPSPLKKLHARLGLVEPEEGNSLAGLIVDAEVQRRMEEVWSRRRSHGQPIAQEDLD-SDPHKWLLPAKGEWRGGTHLSPDQEGKMAPGRPPKPLEIPTLDLQVVELAASALGALYRNAVSVVEE-----EERFEDPRGCSRHSIPAVVGSLVGCQLALHLYSAMVLCAADGGGXXXXXTGGWAGWVSGKDTGMTEAGMQGAVPRFQVIFDRPSVVLPQLAGVSMAVDEAIESILGTYYESDLMTFSFAPLYARCLKM 804
The following BLAST results are available for this feature:
BLAST of NO06G02610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26278.12.000e-20350.06hypothetical protein Naga_100073g2 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000199NSK000199Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G02610.1NO06G02610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672477gene_6582Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100073g2gene4251Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G02610.1NO06G02610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G02610 ID=NO06G02610|Name=NO06G02610|organism=Nannochloropsis oceanica|type=gene|length=2698bp
ACCACAGGAAGCGTTCCTGCCCCGCCATTTTGTTTCTTCAGCAGCGAAGC
GAAGAAGCACTCGCTTACTTGGGCGCCCAGCGACCAGCCTTGTTCGCACT
ACCACGCACAAGTGCCACATCCACAGCAATATCTCTGTCTATCAATACAT
CAAAACAGCCAGACCAGACAGTCGATCAAGGCGAGGCATCATGGGAACGC
CCCCGGCCAAGAGAGAGAAAACCCCTCAGGAGGAGGTCAAGCAGCTGCAC
ATCAGGCGCCTGAGCTTGTACGTAGCTGCCAGACTTGTATTGACACAGAT
GCACTTCCAGTTTCTTACTCACAACTTACGACAAGGTTGGAGCTGGGGAT
GGTTTCCCATGGTTGTGTATAAATTCCTGCGCTGTTGCACCGTGCTCTTG
ACTTTTTTCCTTCAGAAAGCTTCCGTCTGGGGTTGTTTCAAGAGCTTGTT
CGACCTGGCATTTGGTTGGCTGATACCGCATGGTATTTCCGCATGGGTAT
CGGTTTTGCTTGTTGTCATCGCGCAGGGGCTGAGCATGATGTCCCGTTAT
AATTGCATGTTTGGAGGGGCGGACTGCCCCTCAGTCAGAACAGCCCTGTT
CGCAGCACACGCCGTGGCAGGTCTGCTGGCGAGCGCTGCATTCTTGATCA
GAGCAGGTGGCCCGGGTGGGGAAGGCATCTATAATGCTTGTGAATGGCGA
CATCATGGCACAGCGGTGGTGTTGGCGGGGATGGTATCGTCCTTATTGGA
TGCTTGGGTGTACGATCAGCGGGGATATCAGTCTGCGCATGGCCTTGGGC
CCTTTCGACGAGCCCCTCCTCGGGGACGGAAGACTCATTTGATTTTAGCC
CGTGGATATGACCAGCGGTTGTTTGACTTGCATTATTTTGTGCCAGGGGT
AGGGTCAGGGGAGTCGGAGGAGATGAGGCTGCTCGAGGAGGATATGCAGT
GTGGTCGGCGGAGCCCGCATTCACGCATGCTTTTGCCTCATTTGCCTCCA
CAGCAAAAGTTACCTTCTTTTGTGAGTCCACATTCAAATAAGTGGGCAAG
ATGGGCCGGGAACCACGTGATGCGCTTGTGGTTTTATTGGGAGAACCTTC
AGGGAGGGGAGCTTGTGAGTCGTGTTTGTGTGGGTGTTGTAGGGGTCGCA
ATGGCGGTATGGCCCGTCGAAGCGGCCTTGGGATGGGTTGGCTCCGTAGT
GTTTGGAGAGGATCATCATTATGAGATTTTGCCGCCGAGTGTTGGGAGTT
CGTGGCAGGCCTTGCCGACGGTGGCGTGGACGACGGTGTTGGTGTTATGG
TATGTGGGGTTTAGCCTGGCCGGGGGGACATTATTGCTTTGCCATTTGGT
CAGGCAACCCGTGGATTTCTCGGGCTTTGACGCAGGGGTTGGTAGTGTGG
GCGTGCTCCAGCATTGGTTGGCGAAGGGGTGGACGGTGTTGTTGAGGGAC
CCGGGGCAGCAGCGGATGCAGCAGCAGTCGGAGCTTGGGGGGTTGGGTAG
GAGGAGGAGTGATGGCGCTCCTGCTGCTGCTGTGCGAGGGGAGGAAATGT
GGCAGGTAGAGCTGGAGGATACCCAGCGGGTGTTGTATCGCGTGGCAGTA
CTTGCGAATAAAAGTGTGTATCCCCCTAGGCTAACGACGCATAGCCAGCT
AGCGCGCCAAGGGGTGTCAGTGACGGAGAAACTATACCGGGCACATGCTT
TCTTGGACCTGGCTATTTTGGCCCATACGAATGCAGGCCGACGACGGGAG
GTGTGCTTCAGGGAGATGCCACGGTGGAGGGATGCGTGTCGACCATTGCT
AATGGTGGTGAATGCCCTGACGTTGCAGTTAGAGCTGCAGATGGAAGGGG
GGGGAAGGCTGGAGGGAGGGACGGCCTCACCCATGAAGGGCATGTGTACT
AGGTTGGGCTTGGAAGAGCCCAGAGATGGAAAGGGGCTTGCCGCTCTGAT
CATCGATAGTGAGGTGCAAAGGAGGATGGAGGAGGTGTGGGCAAAGCGGA
GACGGCAGGGGAGGGTGGTGACGGTGGAGGAGATGCAGAAGGCGAGGAGT
GAGCAGTTTCACTTGCCTGCTCGGTTGGTTGGAGGGGTGGGTGGAGGAAG
GGGAGGAAAAGGTAAGGAGAAGAAGCAAATTCTGAGCCCCTTGGCATTAC
CAATGCTGGATCTACAGGTGGTGGAGCTGGCAGCTTCGGCCTTGGCGGGT
TTGTACCGGTATGCGGTGGAAATGGTGGAGGAGGGGGAGGGAGGGAGGGA
GGGAGGATTTGAGGACTCGAGGGGATGTTCGCGGCATAGCATTCCGTCAG
TGATTGGGGCTTTGGTCAGTTGTCAGTTGGCCATGCATCTGTACAGTTAC
ATGGTGCTGTGCGAGGGCGGGGAGGAGGGCGGGGCGGGGGGGACGACGAG
GAAGGGAGGGGTGGCGAGGTTTCAGGTCATTTTGGACCGTCCCAGTGTGG
TGCTTCCGCAGCTGGTGGGGGTATCTCTTGCGGTGGATGATGCGATTGAA
GAGATAGTGGAGAAGTACTACGACTCGGATTTTGCGACGTTTTCTTTCGC
GCCATTGTATGCCCGGTGCGTGAAGATGTATGTGGAGTGTGGGCGGCGGA
AGGTGGGGGAGGGAGGGCAGGAGGGAGGAGTGGCGGGAGAGGTGGGAGGG
ATGGGGGAGGGAGGGAGTCCATCGTTGTTGAGGAAGAGAAGAGCTTGA
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protein sequence of NO06G02610.1

>NO06G02610.1-protein ID=NO06G02610.1-protein|Name=NO06G02610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=836bp
MGTPPAKREKTPQEEVKQLHIRRLSLYVAARLVLTQMHFQFLTHNLRQGW
SWGWFPMVVYKFLRCCTVLLTFFLQKASVWGCFKSLFDLAFGWLIPHGIS
AWVSVLLVVIAQGLSMMSRYNCMFGGADCPSVRTALFAAHAVAGLLASAA
FLIRAGGPGGEGIYNACEWRHHGTAVVLAGMVSSLLDAWVYDQRGYQSAH
GLGPFRRAPPRGRKTHLILARGYDQRLFDLHYFVPGVGSGESEEMRLLEE
DMQCGRRSPHSRMLLPHLPPQQKLPSFVSPHSNKWARWAGNHVMRLWFYW
ENLQGGELVSRVCVGVVGVAMAVWPVEAALGWVGSVVFGEDHHYEILPPS
VGSSWQALPTVAWTTVLVLWYVGFSLAGGTLLLCHLVRQPVDFSGFDAGV
GSVGVLQHWLAKGWTVLLRDPGQQRMQQQSELGGLGRRRSDGAPAAAVRG
EEMWQVELEDTQRVLYRVAVLANKSVYPPRLTTHSQLARQGVSVTEKLYR
AHAFLDLAILAHTNAGRRREVCFREMPRWRDACRPLLMVVNALTLQLELQ
MEGGGRLEGGTASPMKGMCTRLGLEEPRDGKGLAALIIDSEVQRRMEEVW
AKRRRQGRVVTVEEMQKARSEQFHLPARLVGGVGGGRGGKGKEKKQILSP
LALPMLDLQVVELAASALAGLYRYAVEMVEEGEGGREGGFEDSRGCSRHS
IPSVIGALVSCQLAMHLYSYMVLCEGGEEGGAGGTTRKGGVARFQVILDR
PSVVLPQLVGVSLAVDDAIEEIVEKYYDSDFATFSFAPLYARCVKMYVEC
GRRKVGEGGQEGGVAGEVGGMGEGGSPSLLRKRRA*
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Synonyms
Publications