jgi.p|Nanoce1779_2|672477, gene_6582 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672477
Unique Namegene_6582
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:195821..203139 -

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Properties
Property NameValue
TranscriptId672563
ProteinId672477
Product nameDomain of unknown function DUF221-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:195821..203139 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02610NO06G02610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672477mRNA_6582-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672477mRNA_6582Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672477

>mRNA_6582-protein ID=mRNA_6582-protein|Name=jgi.p|Nanoce1779_2|672477|organism=Nannochloropsis oceanica|type=polypeptide|length=1860bp
MGASASKFGQYEANRGGLSPSVVELGAEASAIFFAIFFTVYLIAHWRNWL
PKIFASRKFLYPKRTLPYETPPHRRHLFSWLVDSWSVGDKDVLRYYGLDA
LLFLRSLRLQSLVILLCSLYGLCVILPVNMMGEAVFTSPPWGATYTTAHI
GPLASVAPSSPADPDDPSPPPTPPPAPPSSGSTPEDATRLFLAHVVGAYY
MTGVCLYLLWRQYQDYLALRHAFRQRPDPANYTIMVHHIPGAMRSNTAVS
AYFNELFPNAVQKVTIMLELPELEALIAKRDKVQNRLEWARVVQADRSKL
RCAWGRSQESIDGLVEELSEELPRLEAQVKEWQEELIDWHVRHERFSRHA
STGGIEGGLGVEEEEYEYEYEEEEEDEEDEEEEDVMQLSRSASTVTSGAD
EETGHGGSCEVGEVEEGGEEGGPAQQDPLREALLKKSATKAKTRKEGRTS
RRPNSTSSSSSDIGKNRVRRVTNKKLGVGLEAQKGEEDEGEEGGKEGDEG
KRRRSRLIPSWIREKQPQEQQTRKMTKGAKQPKLRKKQSGLRALREKTFR
MITGNPVGAIAFVSFRSLAVASVAGQCVTYRHPLKMMSKPAPQPEDILWG
NVYMPMRLLPLKTILGVGSSFVVTLFFSVIVGIIASLTNVQTLHDHVPFM
REFLENSKLAQELLPYLPAFLLVMVDCTIPPILSFLARVVFREVRTVSEA
HVTVFRRLYFFLMYNNFLILFLSSSLNTYYAIVEDPHLTLVELGIFLPNI
SSFYIAYIMIKVLCSHPMELSRMSSFFVAGIRWLFTDDLTEAQRATRILG
CNALERPGGFYYGRIYADNLFVFTITMTFALVAPLILPFALAFFTGAAVV
YKRMILFVYEPEFESYGTFWPKTYRRMVAALYFMQLALLCVLITNEAFKE
VAWLVPLPLLTLLGSLVITRSYKNAAAHLPLSEAMEMDEMNKTWGETYNF
LNHSYIQPALQPLEKRSGIVRSRSPPRYTPPTTATAAAAAVPAAVPAPAV
VSDTSASTKTAEGMEKCPEIIRIDGGNKIISNTDRASGETKEAVAGGNGD
EGGGRLEGGTRGSQTRQSIKARHHGNAPGQERENPSGGGQAAAHQAPELK
ASVWGCFKSLFDLAFGWLIPHGISAWVSVLLVVIAQGLSMMSRYNCMFGG
ADCPSVRTALFAAHAVAGLLASAAFLIRAGGPGGEGIYNACEWRHHGTAV
VLAGMVSSLLDAWVYDQRGYQSAHGLGPFRRAPPRGRKTHLILARGYDQR
LFDLHYFVPGVGSGESEEMRLLEEDMQCGRRSPHSRMLLPHLPPQQKLPS
FVSPHSNKWARWAGNHVMRLWFYWENLQGGELVSRVCVGVVGVAMAVWPV
EAALGWVGSVVFGEDHHYEILPPSVGSSWQALPTVAWTTVLVLWYVGFSL
AGGTLLLCHLVRQPVDFSGFDAGVGSVGVLQHWLAKGWTVLLRDPGQQRM
QQQSELGGLGRRRSDGAPAAAVRGEEMWQVELEDTQRVLYRVAVLANKSV
YPPRLTTHSQLARQGVSVTEKLYRAHAFLDLAILAHTNAGRRREVCFREM
PRWRDACRPLLMVVNALTLQLELQMEGGGRLEGGTASPMKGMCTRLGLEE
PRDGKGLAALIIDSEVQRRMEEVWAKRRRQGRVVTVEEMQKARSEQFHLP
ARLVGGVGGGRGGKGKEKKQILSPLALPMLDLQVVELAASALAGLYRYAV
EMVEEGEGGREGGFEDSRGCSRHSIPSVIGALVSCQLAMHLYSYMVLCEG
GEEGGAGGTTRKGGVARFQVILDRPSVVLPQLVGVSLAVDDAIEEIVEKY
YDSDFATFSFAPLYARCVKMYVECGRRKVGEGGQEGGVAGEVGGMGEGGS
PSLLRKRRA*
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Synonyms
Publications