NO06G02320, NO06G02320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G02320 vs. NCBI_GenBank
Match: EWM26200.1 (suppressor enhancer of lin-12 protein 9 [Nannochloropsis gaditana]) HSP 1 Score: 369.0 bits (946), Expect = 1.300e-98 Identity = 194/257 (75.49%), Postives = 214/257 (83.27%), Query Frame = 0 Query: 22 LPS-THAVSLDVPPRDKICLYQYYEAGDTGTAEVFIVNGGNLDIGVSVEGPFADDKDGAPSMTTQETKVLYNAVVASSSAFLNQEHPTGVTASADGLEITWPAKPGAYALCLDNTMSQLQTKLVEFSFPA-PEGKGDGHEDDFDLDAALA--GTDNADNGTIPDNIRQSYKADLALLKHSADRIARTLGDVQQKQQKERHRLALQTAANQNNHHKMVVSSMFETVVFIGVSLFQLFWVRRWFEGRGLRVSSRSREWA 275 +PS H +SL+VPPRDK+CLYQYY+ G+TG AEVF+VNGGNLDIGVSVEGPF DD G PS TTQETK +Y+A+VASSSAFLNQ HP GVTASADG+EI+WPA+PGAYALCLDNTMS +QTK++EFSFPA EG G DDFDLDAALA TI +NI+QSYKADLALLK SA RI RTL DVQ KQ KERHRLALQTAANQ NH KMVVSS+FETVVFI VSLFQLFWVRRWFEGRGLR +RSREWA Sbjct: 23 IPSPAHPLSLEVPPRDKVCLYQYYDVGETGKAEVFVVNGGNLDIGVSVEGPFTDDVHGTPSKTTQETKTVYDAIVASSSAFLNQLHPAGVTASADGIEISWPAQPGAYALCLDNTMSHVQTKVIEFSFPASKEGAG---TDDFDLDAALAXXXXXXXXXXTILENIKQSYKADLALLKRSAQRIGRTLTDVQHKQVKERHRLALQTAANQKNHQKMVVSSVFETVVFISVSLFQLFWVRRWFEGRGLR--ARSREWA 274
BLAST of NO06G02320 vs. NCBI_GenBank
Match: XP_009035203.1 (hypothetical protein AURANDRAFT_62671 [Aureococcus anophagefferens] >EGB10403.1 hypothetical protein AURANDRAFT_62671 [Aureococcus anophagefferens]) HSP 1 Score: 104.8 bits (260), Expect = 4.500e-19 Identity = 77/241 (31.95%), Postives = 123/241 (51.04%), Query Frame = 0 Query: 30 LDVPPRDKICLYQYYEAGDTGTAEVFIVNGGNLDIGVSVEGPF-ADDKDGAPSMTTQETKVLYNAVVASSSAFLNQEHPTGVT-ASADGLEITWPAKPGA---YALCLDNTMSQLQTKLVEFSFPAPEG-KGDGHEDDFDLDAALAGTDNADNGTIPDNIRQSYKADLALLKHSADRIARTLGDVQQKQQKERHRLALQTAANQNNHHKMVVSSMFETVVFIGVSLFQLFWVRRWFEGRGL 265 L + P++K C+Y+ EA + + EVF+++GGNLD+ V+++GPF ++ G P + + + + SA L + +G A+ +EI A G Y +CLDN S++ KLV S G GDG +A N+++ + S ++ +A+LK KQ +ER RLA + H+ MV S+FETVV+I S+FQ+ +VRRWF G+G+ Sbjct: 2130 LRLAPKEKRCVYEELEARQSASLEVFVLSGGNLDVSVAIDGPFPVVEESGLPRSAHRRGE---SGLSKPHSAHLVESKQSGAAFAAPHVIEIAADAAVGGGGIYRICLDNAASRISEKLVTLSVTKAGGAAGDGEPVRKKREAEAKPGKNSESIEKIEKRVVSLRSQIAVLK--------------DKQTRERRRLAHHKSLYDAKHNTMVEGSLFETVVYIVCSIFQIVFVRRWFSGKGI 2353
BLAST of NO06G02320 vs. NCBI_GenBank
Match: CBJ29498.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.2 bits (243), Expect = 4.200e-17 Identity = 72/254 (28.35%), Postives = 123/254 (48.43%), Query Frame = 0 Query: 24 STHAVSLDVPPRDKICLYQYYEAGDTGTAEVFIVNGGNLDIGVSVEGPFADDKDGAPSMTTQETKVLYNAVVASSSAFLNQEHPTGVTASADGLEITWPAKPGAYALCLDNTMSQLQTK---LVEFSFPAPEGKGDGHEDDFDLDAALAGTDNADNGTIPDNIRQSYKADLALLKHSADRIARTLGDVQQKQQKERHRLALQTAANQNNHHKMVVSSMFETVVFIGVSLFQLFWVRRWFEGRGLRVSSRSREWA 275 +T A + + R ++C ++Y E A+VF+ GGNLDIG SV GP D G + K+ +A + S + + + + + G + + A+ G Y +CL N S Q +++ S +G H D TD D G P N K DLA++ D +++ +++ Q+ ER +L + A ++N+ MV SS+ ET+V + V + Q+ +VR+WF G+G + ++WA Sbjct: 18 ATAASTYLIEERAQVCFFRYVEEETKLQAKVFVFKGGNLDIGFSVRGPSQLDDRGNVVHGRTKLKLRKSAKITSENILEDNDDSAELFS---GYDYKFDAEKGEYEICLSNDKSYAQEAKHVMLDISEVVEDGATKKHAKD-------DTTDLQDAGGSPKN-----KEDLAIITKEMDGLSKVFEEIKSFQELERMQLTQRKTAAEDNNASMVQSSVLETIVLLLVGIGQIIFVRKWFSGKGTLL----KQWA 252
BLAST of NO06G02320 vs. NCBI_GenBank
Match: OEU18649.1 (hypothetical protein FRACYDRAFT_236928 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 76.3 bits (186), Expect = 1.700e-10 Identity = 62/246 (25.20%), Postives = 111/246 (45.12%), Query Frame = 0 Query: 28 VSLDVPPRDKICLYQYYEAGDTGTAEVFIVNGGNLDIGVSVEGPFAD-DKDGAPSMTTQETKVLYNAVVASSSAFLNQEHPTGVTAS------ADG---LEITWPAKPGAYALCLDNTMSQLQTKLVEFSFPAPEGKGD-GHEDDFDLDAALAGTDNADNGTI-PDNIRQSYKADLALLKHSADRIARTLGDVQQKQQKERHRLALQTAANQNNHHKMVVSSMFETVVFIGVSLFQLFWVRRWFEG 262 + + + R CL++ + G+ T VFI++G L SVEGP AD D D + TQ + + + +QE + DG L T + G Y +C+ + +Q+ ++ G D GH ++ + + T + I+ D + + R L ++Q QQKER RL + N+++H MV++S+ ET++F+ V+ +Q++ +R+WF G Sbjct: 35 MQVTINQRQAECLHEKLDEGEKVTVSVFILSGSQLKATWSVEGPIADLDVDSGLELYTQSMGFAPSGRKSQRTLSYSQEKREEKKLAQLKKVRQDGEPLLYTTSAPEAGWYRMCVTSNWNQVVAEMEMRKESELGGLNDEGHVRTYEEKQMIDEDQELEEDTASAEGIKDE---DFTETRDKVKDLRRLLNEIQSMQQKERRRLTVHAETNEHSHSSMVLNSLMETLLFMAVTGYQVYTIRKWFSG 277
BLAST of NO06G02320 vs. NCBI_GenBank
Match: XP_002184183.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44361.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 71.2 bits (173), Expect = 5.500e-9 Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 0 Query: 190 DLALLKHSADRIARTLGDVQQKQQKERHRLALQTAANQNNHHKMVVSSMFETVVFIGVSLFQLFWVRRWFEG 262 D K + R L D+Q KQQ+ERHRL + A N+++H +MV+SS+ ET++F+ V+ FQ+F +RRWF+G Sbjct: 191 DFDSTKDKLKTLRRLLADIQTKQQQERHRLIVHAATNEHSHSRMVLSSLLETILFMAVTGFQVFTIRRWFKG 262 The following BLAST results are available for this feature:
BLAST of NO06G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G02320 ID=NO06G02320|Name=NO06G02320|organism=Nannochloropsis oceanica|type=gene|length=825bpback to top protein sequence of NO06G02320.1 >NO06G02320.1-protein ID=NO06G02320.1-protein|Name=NO06G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=275bpback to top Synonyms
Publications
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