NO06G01640, NO06G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01640 vs. NCBI_GenBank
Match: EWM26180.1 (60s ribosomal protein l9 [Nannochloropsis gaditana]) HSP 1 Score: 361.3 bits (926), Expect = 1.900e-96 Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIV 193 MKLILATK VNIPEGVT+ IKSRHVTVKGPRGELSR FKHLN+AFELVGGNKDKGTNPKKLKVDLWF NRKQLATIRTVCSH ENL+TGVTKGFLY+MRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVR+SDVKDQIELKGNDLT VSLTAARIQQCTTVKRKDIRKFLDGIYVS K HIV Sbjct: 1 MKLILATKIVNIPEGVTLHIKSRHVTVKGPRGELSRAFKHLNIAFELVGGNKDKGTNPKKLKVDLWFANRKQLATIRTVCSHIENLMTGVTKGFLYRMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRSSDVKDQIELKGNDLTAVSLTAARIQQCTTVKRKDIRKFLDGIYVSQKTHIV 192
BLAST of NO06G01640 vs. NCBI_GenBank
Match: CBN79209.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 290.0 bits (741), Expect = 5.400e-75 Identity = 145/195 (74.36%), Postives = 163/195 (83.59%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK +LAT+YV IPEGVT+ +KSR VTV GPRGEL + FKHLNL + G N KL+VDLWFGNRKQLA IRT+CSH EN+ITGVTKG+LYKMRF YAHFPINVS+T KTVE+RNFLGEKRVRRVEL PGV+YVRTSDVKDQIEL GND+ VS+TAARIQQ T+VKRKDIRKFLDGIYVS K +IV+ D Sbjct: 1 MKTLLATRYVTIPEGVTIDVKSRVVTVTGPRGELVQSFKHLNLDLQKSGKN--------KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKRVRRVELAPGVDYVRTSDVKDQIELSGNDIQAVSMTAARIQQSTSVKRKDIRKFLDGIYVSEKLNIVQED 187
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009038191.1 (hypothetical protein AURANDRAFT_71877 [Aureococcus anophagefferens] >EGB06949.1 hypothetical protein AURANDRAFT_71877 [Aureococcus anophagefferens]) HSP 1 Score: 249.2 bits (635), Expect = 1.000e-62 Identity = 121/195 (62.05%), Postives = 150/195 (76.92%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK I TK++NIPEGV +T KSR V+VKGPRGEL+R FKH+ L E+ +LK+ LWFG RKQ+ATIRT+ SH EN++ GVT+GF YKMRFVY+HFPINV+L + VE+RNFLG+K VR+V+LL GV+YVRT+DVKDQIEL ND+ VSLTAARI+Q +K KD+RKFLDGI+VS KG I + D Sbjct: 54 MKTINGTKFLNIPEGVEVTCKSRTVSVKGPRGELTRTFKHVQLEMEMT----TNAAGAPQLKIQLWFGTRKQIATIRTIYSHVENMVIGVTQGFCYKMRFVYSHFPINVALNGRVVEIRNFLGDKLVRKVKLLDGVDYVRTADVKDQIELTSNDIAAVSLTAARIRQSCDIKHKDLRKFLDGIFVSQKGPIPKED 244
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_002178291.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49956.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 248.4 bits (633), Expect = 1.800e-62 Identity = 120/198 (60.61%), Postives = 149/198 (75.25%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNK---------DKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKG 190 MK +LA++ + IP+GVT+ I +R + V GPRG L R FKH+++ V G ++ TN +KVDLWF RKQLA +RTVCSH +NL GVT+GFLYKMRFVY+HFPINV+LT +TVE+RNFLGEKRVR+V+LL GV Y RT+ VKDQIEL GND+ VSLTAA+IQQ T ++ KD+RKFLDGIYVS KG Sbjct: 1 MKTVLASRNIVIPDGVTVEINARKIKVTGPRGVLERDFKHISMDLRKVDGESLGYTVEEDGEEATNASYIKVDLWFATRKQLACVRTVCSHIDNLFVGVTRGFLYKMRFVYSHFPINVTLTGETVEIRNFLGEKRVRKVKLLEGVSYERTASVKDQIELSGNDIAAVSLTAAKIQQATNIRHKDLRKFLDGIYVSEKG 198
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009042484.1 (hypothetical protein AURANDRAFT_60385 [Aureococcus anophagefferens] >EGB02818.1 hypothetical protein AURANDRAFT_60385 [Aureococcus anophagefferens]) HSP 1 Score: 247.3 bits (630), Expect = 4.000e-62 Identity = 120/195 (61.54%), Postives = 150/195 (76.92%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLTDKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK I TK+++IPEGV +T KSR V+VKGPRGEL+R FKH+ L E+ +LK+ LWFG RKQ+ATIRT+ SH EN++ GVT+GF YKMRFVY+HFPINV+L + VE+RNFLG+K VR+V+LL GV+YVRT+DVKDQIEL ND+ VSLTAARI+Q +K KD+RKFLDGI+VS KG I + D Sbjct: 1 MKTINGTKFLDIPEGVEVTCKSRTVSVKGPRGELTRTFKHVQLEMEMT----TNAAGAPQLKIQLWFGTRKQIATIRTIYSHVENMVIGVTQGFCYKMRFVYSHFPINVALNGRVVEIRNFLGDKLVRKVKLLDGVDYVRTADVKDQIELTSNDIAAVSLTAARIRQSCDIKHKDLRKFLDGIFVSQKGPIPKED 191
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_006351066.1 (PREDICTED: 60S ribosomal protein L9-1 [Solanum tuberosum]) HSP 1 Score: 241.1 bits (614), Expect = 2.900e-60 Identity = 118/197 (59.90%), Postives = 154/197 (78.17%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IPEG+T+ +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S++ +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPEGITIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASISGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_004244773.1 (PREDICTED: 60S ribosomal protein L9-1 [Solanum lycopersicum] >XP_015083397.1 PREDICTED: 60S ribosomal protein L9-1 [Solanum pennellii]) HSP 1 Score: 240.0 bits (611), Expect = 6.300e-60 Identity = 117/197 (59.39%), Postives = 154/197 (78.17%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S++ +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASISGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: PHT39653.1 (hypothetical protein CQW23_18507 [Capsicum baccatum]) HSP 1 Score: 239.6 bits (610), Expect = 8.300e-60 Identity = 117/197 (59.39%), Postives = 153/197 (77.66%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+G+T+ +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH NLITGVTKG+ YKMRFVYAHFPIN S+T +K++E+RNFLGEK+VR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGITIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVNNLITGVTKGYRYKMRFVYAHFPINASITGGNKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: XP_009630547.1 (PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] >XP_009784194.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana sylvestris] >XP_016494547.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tabacum] >XP_016441523.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tabacum] >XP_018621824.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] >XP_019257367.1 PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana attenuata]) HSP 1 Score: 239.2 bits (609), Expect = 1.100e-59 Identity = 118/197 (59.90%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+GV + +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S++ +K +E+RNFLGEKRVR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGVNIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASISGGNKAIEIRNFLGEKRVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194
BLAST of NO06G01640 vs. NCBI_GenBank
Match: OIS96337.1 (60s ribosomal protein l9-1 [Nicotiana attenuata]) HSP 1 Score: 239.2 bits (609), Expect = 1.100e-59 Identity = 118/197 (59.90%), Postives = 152/197 (77.16%), Query Frame = 0 Query: 1 MKLILATKYVNIPEGVTMTIKSRHVTVKGPRGELSRGFKHLNLAFELVGGNKDKGTNPKKLKVDLWFGNRKQLATIRTVCSHFENLITGVTKGFLYKMRFVYAHFPINVSLT--DKTVEVRNFLGEKRVRRVELLPGVEYVRTSDVKDQIELKGNDLTTVSLTAARIQQCTTVKRKDIRKFLDGIYVSHKGHIVESD 196 MK IL+++ ++IP+GV + +K++ + V+GPRG+L+R FKHLNL F+L+ KD+ T KKLK+D WFG+RK A IRT SH ENLITGVTKG+ YKMRFVYAHFPIN S++ +K +E+RNFLGEKRVR+V++L GV VR+ VKD++ L GND+ VS +AA I Q VK KDIRKFLDGIYVS KG IVE + Sbjct: 1 MKTILSSETMDIPDGVNIKVKAKQIEVEGPRGKLTRNFKHLNLDFQLI---KDEETGKKKLKIDAWFGSRKTTAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASISGGNKAIEIRNFLGEKRVRKVDMLEGVTVVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGRIVEEE 194 The following BLAST results are available for this feature:
BLAST of NO06G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01640 ID=NO06G01640|Name=NO06G01640|organism=Nannochloropsis oceanica|type=gene|length=1312bpback to top protein sequence of NO06G01640.1 >NO06G01640.1-protein ID=NO06G01640.1-protein|Name=NO06G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top Synonyms
Publications
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