NO06G01300, NO06G01300 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01300 vs. NCBI_GenBank
Match: EWM26173.1 (hypothetical protein Naga_100121g6 [Nannochloropsis gaditana]) HSP 1 Score: 837.8 bits (2163), Expect = 5.600e-239 Identity = 616/1467 (41.99%), Postives = 721/1467 (49.15%), Query Frame = 0
Query: 185 LVRKLVMYHGFTKEGRKVIPPGGSARGQRGEDYLEGVDDLQGYVLEKLQGLPPTQAAPSF----------------------------XXXXXXXXXXXXXXXXXXXXXXNGAVDGXXXXXXXXXXXXXXXSDI--NVLQPTDLLDHGVLIKKLLSKRYQWKKEWPSAKDKMVQEYAYLPPGGNK---AGRAGVDYAISFDDMRKMVVSRYFKGQEEYLLGEFSVPVVEEIPDVSLTRERHFCL--GGRKGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVENRMVEXXXXXXXXXXXXXXXXXXXMDLSDEVN------------------TGASSSSRPARAAATIADHAGITPLQMQVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQLAPEAWFSREHILASLRDSSFFTAAVEILVKTHEWQVLPSQGKFLSATGKFYVTPGGRPPWEGGVHGIDYLLDHDELQNYIGQGFGLRSNQFAPIESVQRPGEGYTHVLSPLHDERCRSTRSGKAYTASTGGRKGSISVMRLDESPPALDLGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAARHPSASFVTPGLVRATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRYTYSVLKAKGWTLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAP-HFFPCEKDALAWARGKEGRKERVIVTWDELLLAASTCPYQPLINAMEKARSKLGQAGSADCYVSSVRGDEGRRLLEFYNKHLMHPEGAWIRVGGLPGTGKTLAVQHSEILLGQALEKRGVETRPTFVRVNCAEFTTPRSFLEALAGKVGLGXXXXXXXXXXXXXXXXXXXXLGEV----GEEELWTRLDERLR--SKTSMRGGIREATDNGSFLGPSTTSSSSISSTIRMGGSFSNVLGSPIIKSVTSWXXXXXXXXXXXXXXXXXXXXXSDRLKLP---------EKVNEQVGRLVVLVLDELDQFISTNKETSGCVARLIEKVVMDAGSRVLLVTVSNTIDDHTALGALWSKARAAAGKVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFRPFNDAELVMILKACVGETFQLPALAIIAKRVTSSRGDARVAVDTCRRALEKHLRILEEKARGWCPPLSPEEGGKEGGVVVVPTA-GERQVTVPEANVASKEMDLDVGKDIGKLPQRARFLLLVLLHMTTAETHGQGGKEGGQVKQADLQNEYTHQAKAILGANQLGASSNFENDLEWIDENGLVERGRGGGRGGLKHTVSPKVDWAMVLPKLTAQDKTLFKALLP 1582
+ KLV YHGF EGRK+IPPGGSARGQRGEDYLEG+DDLQ YVLEK+QGLPPTQ PSF N AV SD VLQPTDLLD VL++KLL + Y WKK+WP A+ ++QEY Y+PPGG + G AGVD+AISF+ +R++VV +YFKG++ LL E +VPVVEEI D+ LT+ERHF + GR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX DL ++ + +SR R I AG Q + + LAP WF R+H++A LRD F AA+++L+KTHEWQVLPSQ F S +GKFYV PGGR PWEGG HG+DYL+DH+EL Y+ GFGLR+NQFAPI + RP Y ++SPLHD STRSG+ YT S +++ESP AL L + ++A+ S F+TP V DRYTYSVLKAK WTL G P F EKDAL WAR + G +V+ +EL A CPYQP+I ME ARS+LGQAGS DC+VS+VR E RRLL+FY +L+ P GAW+RVGGLPGTGKTLAVQHSE LL AL RGV RPTF+R+NCA ++ P+SFLEALA ++ L LG V E+ LW +L+ERLR + M G GS GG+ S+VL SP+IKS+TSW X XXX XX ++ K NE VGR VVLVLDELDQFI+TN+ET GCVARLI V+M AGSR LLVTVSNTIDDHTALGALWSKA+ AG+ IFRPF DAELV ILK CVG+TFQ PALA+IAKRVTSSRGDARVAVDTCRRALE+H+R L+ KA+ WC P S EG K+ G + ERQVT EAN ASKEMD+DVGKDIGKLPQ ARFLLLVLLHMTT T G GGK G QVK ADLQNEYT QAKAILGA+QLGASSNFE++LEWIDENGLVE+ G+GG VSPKVDWA VLPKLT QDKT FKALLP
Sbjct: 1 MTHKLVTYHGFVTEGRKLIPPGGSARGQRGEDYLEGLDDLQAYVLEKIQGLPPTQDNPSFNASSSRNWGPMGRVGASPYVGEPDMGNGKAGQGMGAGRDKGKRGPGRPSSNKAVVARPSEGNGRANGVDGLSDEIGKVLQPTDLLDQTVLLQKLL-RHYGWKKQWPEAR-SLIQEYIYVPPGGKRPSAGGVAGVDFAISFEHLRQLVVRKYFKGED--LLTEHAVPVVEEI-DLDLTKERHFSMIRAGREKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKVGGVEGETWSGQREDCMETDLHPALSEDQERXXXXXXXXXXXXXSPEPRTSRDERTKGHIRGVAGEKDAHDQSQ-------------PTESEGGITYSSPQSPLSGAREEVLHSHARSNSRLEGHFSVLAPGEWFQRDHLVAWLRDGKTFNAALDVLMKTHEWQVLPSQENFTSTSGKFYVAPGGRTPWEGGTHGVDYLMDHEELIEYVTNGFGLRTNQFAPITAALRPDRLYRKIISPLHDRSRHSTRSGRTYTPIPSAEPAS---TQMEESPSALRLDGE---------------------------------------------------------------------------------VEEEEEGRGRERCGDTSTGPFIEHAAKRKCLEKSAGALASAVSSVPFLTPMEV-------------------------------------------DRYTYSVLKAKRWTL------------------------------ALRPPAPSSSNDAMYELIPPQEEGLPTRPFNSEKDALLWARDEGG-----LVSSEELQTHAEACPYQPIIAEMEVARSRLGQAGSGDCHVSAVREVESRRLLDFYMAYLLEPTGAWLRVGGLPGTGKTLAVQHSEALLAHALASRGVNARPTFIRLNCAAYSAPKSFLEALAAQLHL-----TGGTGSFASASSRRMSLGAVREPLTEDALWAKLEERLRWVKRPDMNG-------RGS------------------GGTLSDVLSSPLIKSMTSWFRGGGAGAXTKXXXEXXRKVSEEQEAASGDRRLDSSVVKANELVGRTVVLVLDELDQFIATNRETIGCVARLISNVIMVAGSRALLVTVSNTIDDHTALGALWSKAKTTAGR--------------------------SPACWKDYAGHDEDRALAAGVGEEKLEPIIFRPFQDAELVQILKVCVGDTFQAPALAMIAKRVTSSRGDARVAVDTCRRALERHVRTLDAKAKAWC-PASLMEGEKDNGDKSMEVRDSERQVTAAEANAASKEMDVDVGKDIGKLPQHARFLLLVLLHMTT--TRG-GGKGGNQVKLADLQNEYTQQAKAILGASQLGASSNFEDNLEWIDENGLVEK----GKGGKAKVVSPKVDWATVLPKLTVQDKTHFKALLP 1223 The following BLAST results are available for this feature:
BLAST of NO06G01300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01300 ID=NO06G01300|Name=NO06G01300|organism=Nannochloropsis oceanica|type=gene|length=5209bpback to top protein sequence of NO06G01300.1 >NO06G01300.1-protein ID=NO06G01300.1-protein|Name=NO06G01300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1583bpback to top Synonyms
Publications
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