Naga_100121g6, gene4356 (gene) Nannochloropsis gaditana

Overview
NameNaga_100121g6
Unique Namegene4356
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:808588..812583 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100121g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:808588..812583 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL145ngnoL145Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01300NO06G01300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4514rna4514-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4514rna4514Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4514

>rna4514-protein ID=rna4514-protein|Name=rna4514|organism=Nannochloropsis gaditana|type=polypeptide|length=1224bp
MTHKLVTYHGFVTEGRKLIPPGGSARGQRGEDYLEGLDDLQAYVLEKIQG
LPPTQDNPSFNASSSRNWGPMGRVGASPYVGEPDMGNGKAGQGMGAGRDK
GKRGPGRPSSNKAVVARPSEGNGRANGVDGLSDEIGKVLQPTDLLDQTVL
LQKLLRHYGWKKQWPEARSLIQEYIYVPPGGKRPSAGGVAGVDFAISFEH
LRQLVVRKYFKGEDLLTEHAVPVVEEIDLDLTKERHFSMIRAGREKNGEE
EEEEDDDEDEDEEDDDEEEQEEEEEADAEEREKAEGKVGGVEGETWSGQR
EDCMETDLHPALSEDQERREERDREERTEEMSPEPRTSRDERTKGHIRGV
AGEKDAHDQSQPTESEGGITYSSPQSPLSGAREEVLHSHARSNSRLEGHF
SVLAPGEWFQRDHLVAWLRDGKTFNAALDVLMKTHEWQVLPSQENFTSTS
GKFYVAPGGRTPWEGGTHGVDYLMDHEELIEYVTNGFGLRTNQFAPITAA
LRPDRLYRKIISPLHDRSRHSTRSGRTYTPIPSAEPASTQMEESPSALRL
DGEVEEEEEGRGRERCGDTSTGPFIEHAAKRKCLEKSAGALASAVSSVPF
LTPMEVDRYTYSVLKAKRWTLALRPPAPSSSNDAMYELIPPQEEGLPTRP
FNSEKDALLWARDEGGLVSSEELQTHAEACPYQPIIAEMEVARSRLGQAG
SGDCHVSAVREVESRRLLDFYMAYLLEPTGAWLRVGGLPGTGKTLAVQHS
EALLAHALASRGVNARPTFIRLNCAAYSAPKSFLEALAAQLHLTGGTGSF
ASASSRRMSLGAVREPLTEDALWAKLEERLRWVKRPDMNGRGSGGTLSDV
LSSPLIKSMTSWFRGGGAGAATKAAVETTRKVSEEQEAASGDRRLDSSVV
KANELVGRTVVLVLDELDQFIATNRETIGCVARLISNVIMVAGSRALLVT
VSNTIDDHTALGALWSKAKTTAGRSPACWKDYAGHDEDRALAAGVGEEKL
EPIIFRPFQDAELVQILKVCVGDTFQAPALAMIAKRVTSSRGDARVAVDT
CRRALERHVRTLDAKAKAWCPASLMEGEKDNGDKSMEVRDSERQVTAAEA
NAASKEMDVDVGKDIGKLPQHARFLLLVLLHMTTTRGGGKGGNQVKLADL
QNEYTQQAKAILGASQLGASSNFEDNLEWIDENGLVEKGKGGKAKVVSPK
VDWATVLPKLTVQDKTHFKALLPK
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Synonyms
Publications