NO06G00920, NO06G00920 (gene) Nannochloropsis oceanica

Overview
NameNO06G00920
Unique NameNO06G00920
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1337
Alignment locationchr6:306377..307713 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:306377..307713 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00920.2NO06G00920.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G00920.1NO06G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00920.2NO06G00920.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G00920.1NO06G00920.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00920 ID=NO06G00920|Name=NO06G00920|organism=Nannochloropsis oceanica|type=gene|length=1337bp
CCAAAATGTGGCACAACCATTCTAAACCACGCACTATCCGACAAGAACGC
ACCAAAAGGCCGGCACAATTACCTCCATTATTTTAATGTTTGTTGACGAC
TGTGATGGAGTTTCTTGGGCCAGAATCTCGAGTTTTGTCCTATATGAAGT
TCCTCAAGCAACCACTTTCCAGCAACCCCACCCACCGATCCCACAGCCAT
GCTAATGAAAACGCAGACCACGACTCGCTTGACGTCGACAACGACAACGG
GAAGgtaagacattccgtaattatagctgcatttctcggagtgtcaaaag
tacaaatttccccgtccctatgaatagCCATGGCACCTCCAGCACCACGT
CCTCGTCCTCGTCGTCCTACCCATCACCAGAGTACATTCGGCGACAATAC
CAGATGCGCCAAAAGATTGTGAAAAACGATGTTTTGAAAGAAGAGCTATA
CATGCACGAGCTCGAGGCGAAATTGGCCAGTCTTCGAACGCCCGCCAAGA
CACCATTGAGCCGGACGGACACAAGCCAAGCCGCCCAAACATTACTTTCC
GAGCAAGCAGCAGGGCATGCACAATCTACGGCACTCCTTTTGAGAAATCA
GAGTGCATCGTCAAATCAAATGGCGATGGCTATGGCCCCGTTGGCCCGTC
ACCCAGTCTTAGACCGCACCGACCAAGCTCTTCCCGCCCTCCTTCCCATG
CATGTGCCTCTAAAGTCCCTGTCTATTTTGCAAGTTGGACGCTTGCTGCA
GCATCATAATCTGACGTCCTACATTGAACCTTTCGCACGAAACTATGTAG
ATGGAGTCATTTTGGCGgtgcgtttataatcggggcgtgagttgggtgtt
cttgctctccccgaaaaaatagtagagacatagatccgcccatctcataa
tttcccttacagGAAACTACGCTGTCCCATGACGATCTCTGTGAACTCGG
TGTGCACATTCGCTTGCATCGCGTGCGGTTGTTTAAGGTCATTCAGGAGT
TCAAGCGCCATGGAGTACCTCCGTCGATGCTTTATCGACATCAGAGGGAA
GAAGAGCTGCCTGCCTCCCACGCCGATGATTCAGATTATGAAGATGAAGA
GAACAGCTATAAATATTTGATTGGCGTCCGTTCGACTGATACCTTAGACG
AAGCATTTGCCGGTCGAGAGTCGGCAGCCTCCTTCTCGACTGTCATGGAG
GGGGAGGGAAAGGAGGAGGGAATCATACGGCAGGAGGCAGCGACCAGGAC
AAATAGGGTTGCGGGATGTAAAACTTAAGAGAGATCTCAAAGGCCTTGTC
TTGTGAAGATGTATACTTAGATAAAATAATGGTCCGG
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protein sequence of NO06G00920.2

>NO06G00920.2-protein ID=NO06G00920.2-protein|Name=NO06G00920.2|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MNSHGTSSTTSSSSSSYPSPEYIRRQYQMRQKIVKNDVLKEELYMHELEA
KLASLRTPAKTPLSRTDTSQAAQTLLSEQAAGHAQSTALLLRNQSASSNQ
MAMAMAPLARHPVLDRTDQALPALLPMHVPLKSLSILQVGRLLQHHNLTS
YIEPFARNYVDGVILAETTLSHDDLCELGVHIRLHRVRLFKVIQEFKRHG
VPPSMLYRHQREEELPASHADDSDYEDEENSYKYLIGVRSTDTLDEAFAG
RESAASFSTVMEGEGKEEGIIRQEAATRTNRVAGCKT*
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protein sequence of NO06G00920.1

>NO06G00920.1-protein ID=NO06G00920.1-protein|Name=NO06G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MLMKTQTTTRLTSTTTTGSHGTSSTTSSSSSSYPSPEYIRRQYQMRQKIV
KNDVLKEELYMHELEAKLASLRTPAKTPLSRTDTSQAAQTLLSEQAAGHA
QSTALLLRNQSASSNQMAMAMAPLARHPVLDRTDQALPALLPMHVPLKSL
SILQVGRLLQHHNLTSYIEPFARNYVDGVILAETTLSHDDLCELGVHIRL
HRVRLFKVIQEFKRHGVPPSMLYRHQREEELPASHADDSDYEDEENSYKY
LIGVRSTDTLDEAFAGRESAASFSTVMEGEGKEEGIIRQEAATRTNRVAG
CKT*
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Synonyms
Publications