NO06G00920.1, NO06G00920.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G00920.1
Unique NameNO06G00920.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1169
Alignment locationchr6:306377..307713 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:306377..307713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00920.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00920NO06G00920Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G00920.1NO06G00920.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G00920.1.cds1NO06G00920.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G00920.1.cds2NO06G00920.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G00920.1.cds3NO06G00920.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G00920.1 ID=NO06G00920.1|Name=NO06G00920.1|organism=Nannochloropsis oceanica|type=mRNA|length=1169bp
CCAAAATGTGGCACAACCATTCTAAACCACGCACTATCCGACAAGAACGC
ACCAAAAGGCCGGCACAATTACCTCCATTATTTTAATGTTTGTTGACGAC
TGTGATGGAGTTTCTTGGGCCAGAATCTCGAGTTTTGTCCTATATGAAGT
TCCTCAAGCAACCACTTTCCAGCAACCCCACCCACCGATCCCACAGCCAT
GCTAATGAAAACGCAGACCACGACTCGCTTGACGTCGACAACGACAACGG
GAAGCCATGGCACCTCCAGCACCACGTCCTCGTCCTCGTCGTCCTACCCA
TCACCAGAGTACATTCGGCGACAATACCAGATGCGCCAAAAGATTGTGAA
AAACGATGTTTTGAAAGAAGAGCTATACATGCACGAGCTCGAGGCGAAAT
TGGCCAGTCTTCGAACGCCCGCCAAGACACCATTGAGCCGGACGGACACA
AGCCAAGCCGCCCAAACATTACTTTCCGAGCAAGCAGCAGGGCATGCACA
ATCTACGGCACTCCTTTTGAGAAATCAGAGTGCATCGTCAAATCAAATGG
CGATGGCTATGGCCCCGTTGGCCCGTCACCCAGTCTTAGACCGCACCGAC
CAAGCTCTTCCCGCCCTCCTTCCCATGCATGTGCCTCTAAAGTCCCTGTC
TATTTTGCAAGTTGGACGCTTGCTGCAGCATCATAATCTGACGTCCTACA
TTGAACCTTTCGCACGAAACTATGTAGATGGAGTCATTTTGGCGGAAACT
ACGCTGTCCCATGACGATCTCTGTGAACTCGGTGTGCACATTCGCTTGCA
TCGCGTGCGGTTGTTTAAGGTCATTCAGGAGTTCAAGCGCCATGGAGTAC
CTCCGTCGATGCTTTATCGACATCAGAGGGAAGAAGAGCTGCCTGCCTCC
CACGCCGATGATTCAGATTATGAAGATGAAGAGAACAGCTATAAATATTT
GATTGGCGTCCGTTCGACTGATACCTTAGACGAAGCATTTGCCGGTCGAG
AGTCGGCAGCCTCCTTCTCGACTGTCATGGAGGGGGAGGGAAAGGAGGAG
GGAATCATACGGCAGGAGGCAGCGACCAGGACAAATAGGGTTGCGGGATG
TAAAACTTAAGAGAGATCTCAAAGGCCTTGTCTTGTGAAGATGTATACTT
AGATAAAATAATGGTCCGG
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protein sequence of NO06G00920.1

>NO06G00920.1-protein ID=NO06G00920.1-protein|Name=NO06G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MLMKTQTTTRLTSTTTTGSHGTSSTTSSSSSSYPSPEYIRRQYQMRQKIV
KNDVLKEELYMHELEAKLASLRTPAKTPLSRTDTSQAAQTLLSEQAAGHA
QSTALLLRNQSASSNQMAMAMAPLARHPVLDRTDQALPALLPMHVPLKSL
SILQVGRLLQHHNLTSYIEPFARNYVDGVILAETTLSHDDLCELGVHIRL
HRVRLFKVIQEFKRHGVPPSMLYRHQREEELPASHADDSDYEDEENSYKY
LIGVRSTDTLDEAFAGRESAASFSTVMEGEGKEEGIIRQEAATRTNRVAG
CKT*
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mRNA from alignment at chr6:306377..307713-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G00920.1 ID=NO06G00920.1|Name=NO06G00920.1|organism=Nannochloropsis oceanica|type=mRNA|length=1337bp|location=Sequence derived from alignment at chr6:306377..307713- (Nannochloropsis oceanica)
CCAAAATGTGGCACAACCATTCTAAACCACGCACTATCCGACAAGAACGC
ACCAAAAGGCCGGCACAATTACCTCCATTATTTTAATGTTTGTTGACGAC
TGTGATGGAGTTTCTTGGGCCAGAATCTCGAGTTTTGTCCTATATGAAGT
TCCTCAAGCAACCACTTTCCAGCAACCCCACCCACCGATCCCACAGCCAT
GCTAATGAAAACGCAGACCACGACTCGCTTGACGTCGACAACGACAACGG
GAAGGTAAGACATTCCGTAATTATAGCTGCATTTCTCGGAGTGTCAAAAG
TACAAATTTCCCCGTCCCTATGAATAGCCATGGCACCTCCAGCACCACGT
CCTCGTCCTCGTCGTCCTACCCATCACCAGAGTACATTCGGCGACAATAC
CAGATGCGCCAAAAGATTGTGAAAAACGATGTTTTGAAAGAAGAGCTATA
CATGCACGAGCTCGAGGCGAAATTGGCCAGTCTTCGAACGCCCGCCAAGA
CACCATTGAGCCGGACGGACACAAGCCAAGCCGCCCAAACATTACTTTCC
GAGCAAGCAGCAGGGCATGCACAATCTACGGCACTCCTTTTGAGAAATCA
GAGTGCATCGTCAAATCAAATGGCGATGGCTATGGCCCCGTTGGCCCGTC
ACCCAGTCTTAGACCGCACCGACCAAGCTCTTCCCGCCCTCCTTCCCATG
CATGTGCCTCTAAAGTCCCTGTCTATTTTGCAAGTTGGACGCTTGCTGCA
GCATCATAATCTGACGTCCTACATTGAACCTTTCGCACGAAACTATGTAG
ATGGAGTCATTTTGGCGGTGCGTTTATAATCGGGGCGTGAGTTGGGTGTT
CTTGCTCTCCCCGAAAAAATAGTAGAGACATAGATCCGCCCATCTCATAA
TTTCCCTTACAGGAAACTACGCTGTCCCATGACGATCTCTGTGAACTCGG
TGTGCACATTCGCTTGCATCGCGTGCGGTTGTTTAAGGTCATTCAGGAGT
TCAAGCGCCATGGAGTACCTCCGTCGATGCTTTATCGACATCAGAGGGAA
GAAGAGCTGCCTGCCTCCCACGCCGATGATTCAGATTATGAAGATGAAGA
GAACAGCTATAAATATTTGATTGGCGTCCGTTCGACTGATACCTTAGACG
AAGCATTTGCCGGTCGAGAGTCGGCAGCCTCCTTCTCGACTGTCATGGAG
GGGGAGGGAAAGGAGGAGGGAATCATACGGCAGGAGGCAGCGACCAGGAC
AAATAGGGTTGCGGGATGTAAAACTTAAGAGAGATCTCAAAGGCCTTGTC
TTGTGAAGATGTATACTTAGATAAAATAATGGTCCGG
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Coding sequence (CDS) from alignment at chr6:306377..307713-

>NO06G00920.1 ID=NO06G00920.1|Name=NO06G00920.1|organism=Nannochloropsis oceanica|type=CDS|length=912bp|location=Sequence derived from alignment at chr6:306377..307713- (Nannochloropsis oceanica)
ATGCTAATGAAAACGCAGACCACGACTCGCTTGACGTCGACAACGACAAC
GGGAAGCCATGGCACCTCCAGCACCACGTCCTCGTCCTCGTCGTCCTACC
CATCACCAGAGTACATTCGGCGACAATACCAGATGCGCCAAAAGATTGTG
AAAAACGATGTTTTGAAAGAAGAGCTATACATGCACGAGCTCGAGGCGAA
ATTGGCCAGTCTTCGAACGCCCGCCAAGACACCATTGAGCCGGACGGACA
CAAGCCAAGCCGCCCAAACATTACTTTCCGAGCAAGCAGCAGGGCATGCA
CAATCTACGGCACTCCTTTTGAGAAATCAGAGTGCATCGTCAAATCAAAT
GGCGATGGCTATGGCCCCGTTGGCCCGTCACCCAGTCTTAGACCGCACCG
ACCAAGCTCTTCCCGCCCTCCTTCCCATGCATGTGCCTCTAAAGTCCCTG
TCTATTTTGCAAGTTGGACGCTTGCTGCAGCATCATAATCTGACGTCCTA
CATTGAACCTTTCGCACGAAACTATGTAGATGGAGTCATTTTGGCGGAAA
CTACGCTGTCCCATGACGATCTCTGTGAACTCGGTGTGCACATTCGCTTG
CATCGCGTGCGGTTGTTTAAGGTCATTCAGGAGTTCAAGCGCCATGGAGT
ACCTCCGTCGATGCTTTATCGACATCAGAGGGAAGAAGAGCTGCCTGCCT
CCCACGCCGATGATTCAGATTATGAAGATGAAGAGAACAGCTATAAATAT
TTGATTGGCGTCCGTTCGACTGATACCTTAGACGAAGCATTTGCCGGTCG
AGAGTCGGCAGCCTCCTTCTCGACTGTCATGGAGGGGGAGGGAAAGGAGG
AGGGAATCATACGGCAGGAGGCAGCGACCAGGACAAATAGGGTTGCGGGA
TGTAAAACTTAA
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Synonyms
Publications