NO06G00840, NO06G00840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00840 vs. NCBI_GenBank
Match: EWM26124.1 (chaperonin [Nannochloropsis gaditana]) HSP 1 Score: 755.0 bits (1948), Expect = 1.500e-214 Identity = 395/507 (77.91%), Postives = 437/507 (86.19%), Query Frame = 0 Query: 2 TTKSLSPTSTPLSMAGRLLALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLSTWGKACGRRFWQRFPIRKRELGRRL 509 TT S+ P S + L LL +L SC+LP+L FL + L + RH +++MMAKNV+FGDKGLDKLVEGINVVG+AVKVTLGP GRNVVLSR DEPYPQIVNDG TIAREIDL N EVNVGVRLIQEVAK SDRRAGDGT+TSII+TQAIVNQGLKYVKSGMNPVSLRKGI GAT ML +RIP +ARKV GVEDLE +ATVSTGGD++MAKII SVFGRVDLDAKLGGATLLEDGNT+EDELE+SSGMRLDRSG+++AY+VTD ERMVCELRKPRVLVTNYPLLH+YQ++PI+EE+AKTGE LL+V+EETKD+ALSLLVVNKLRG V VCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQT TM+MLGVAE+A TTREHTTLRTSEIF+DIIAEHV NLK+ELD CDNVYDEQKLQYR+AAL+GGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGV PGGG L G FP ++ G + Sbjct: 21 TTMSIRPRSR------QPLTLLLVLASCTLPSLAFLYQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVTLGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAKKSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQRIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGATLLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTNYPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETATTTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGMEMRDEILAAFPDKEERAGAEI 521
BLAST of NO06G00840 vs. NCBI_GenBank
Match: EWM24977.1 (chaperonin [Nannochloropsis gaditana]) HSP 1 Score: 428.3 bits (1100), Expect = 3.300e-116 Identity = 237/462 (51.30%), Postives = 328/462 (71.00%), Query Frame = 0 Query: 19 LLALLFLLISCSLPTLGFLQPPRVPLAS--YATARRHGSI--QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFP 477 ++ + LL+S T FL P +P S + A R GS+ MMAKNVR +K KLVEGIN+V +AVKVTLGP GRNVVL R P+IVNDG TIAR+I+L +PE NVGV+L+QEVA SD +AGDGT+TS +MTQAIVNQG++ V +G NPV+LR+GI +L + + +A+ V +DL +ATV+TGG+ EM +I F V G+T++E+ T +DE+E + G+ +DR G+ S Y+V D ER + ELRKPRVLVT + ++++P++E IAK+ EPL +VAE+ +ALS LVVNK+RG ++V +++AP G RRKQ LQDIA+ATGATF+ ++G+ L+++T +MLGVAE V ++ TT+ T+ + + I E + +++E+D D+ +D++K Q R+AAL GG+A IKVGAATETELKDKKLRYEDALNSV++AIEMGV P Sbjct: 21 MVVMATLLVS----TSAFLAPAALPELSKTRSVAARRGSLTTTMMAKNVRLSEKSRQKLVEGINIVANAVKVTLGPKGRNVVLER-KYGVPEIVNDGVTIARDIELSDPEQNVGVKLVQEVATKSDMKAGDGTTTSTVMTQAIVNQGMRQVTAGANPVALRRGIQHTAKILCDTVKQMAKPVESNKDLFDIATVATGGNAEMGAVIAKAFELVG----DSGSTVVEESQTVQDEVEFTEGLSIDR-GYVSPYFVKDQERQLVELRKPRVLVTEGKISAVHEILPLLEHIAKSKEPLFIVAEDVSGEALSALVVNKMRGVLDVVAIKAPGFGDRRKQLLQDIAVATGATFVAEEVGVTLESVTPEMLGVAEKVVVGKDTTTIVTNSNYAEAIKERILAIRREMDLMDSKFDKEKAQQRVAALGGGIARIKVGAATETELKDKKLRYEDALNSVKSAIEMGVVP 472
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_002291674.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91781.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 411.8 bits (1057), Expect = 3.200e-111 Identity = 227/464 (48.92%), Postives = 318/464 (68.53%), Query Frame = 0 Query: 20 LALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484 L++++L CS T S+ RR S + AK V F ++ KLV+GIN V +AVKVTLGP GRNVVL R + P+IVNDG TIAREI L +PE NVGVRL+QEVA SD +AGDGT+TS IMTQAIVN G+K V SG+NP++L GI + M+ +I +++K+ GVEDL+ VAT+++ G +M +II F +V + G+T++E+ T DE+E + G+ +DR G+ S Y+V D ER V EL PR+LVT+ + + +++P++E++ KT EP+L++AE+ DALS LVVNK+RG ++V ++RAP G RRK +LQDIA+ATGAT++ ++G+ L ++T DMLG A+ V +E TT+ T +D + + +K+E + D +D K Q R+AAL GG+A IKVGAATETELKDKKLRYEDALNSV++A E+G+ PGGG L+ Sbjct: 8 LSMVYLASECSAFTAN--------SNSFQATRRLSSTALSAKRVSFKEESRKKLVDGINQVANAVKVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREISLADPECNVGVRLVQEVASKSDSKAGDGTTTSTIMTQAIVNNGMKAVTSGVNPIALNAGIKKSAGMVAAKIKELSQKINGVEDLQSVATIAS-GSVDMGRIIAQAFDKVGEN----GSTVIEESQTLFDEIEFTEGLTIDR-GYISPYFVKDQERQVAELVNPRILVTDAKIDNVNEIVPLLEQLVKTKEPVLMIAEDVTGDALSALVVNKMRGVLDVVAIRAPGFGQRRKAYLQDIAIATGATYVAEEVGITLDSVTTDMLGTADRCVIAKELTTIVTDGKQEDAVIARIAQIKREGEEADTDFDRDKAQERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVQSARELGIVPGGGACLA 456
BLAST of NO06G00840 vs. NCBI_GenBank
Match: AFA52570.1 (chaperonin [Vaucheria litorea]) HSP 1 Score: 407.1 bits (1045), Expect = 7.800e-110 Identity = 224/465 (48.17%), Postives = 319/465 (68.60%), Query Frame = 0 Query: 15 MAGRLLALLFLLISCSLPTLGFLQPPRVPLASYATARRHGSIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480 MA R + L LL+ F P + L S+ + + M AK V FG++ KLVEGIN V +AV+VTLGP GRNVVL R + P+IVNDG TIAR+I L +PE NVG RL+QEVA+ SD RAGDGT+T+ +MTQAIVN GL+ V SG NPV LR+GI A+ L+++I +++ V G++DL VAT+++G + ++GS+ + G+T++E+ T DE++ + G+ ++R G+ S Y+V D ER VCE+ KP++LVT+ + ++IP++E + K+ EPL +VAE+ +ALS LVVNK+RG ++VC+++AP G RRK +LQDIA+ATGAT++ ++G+ L +T DMLG V ++E TT+ T + +A+ ++ ++KE DN +D++K RIAAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+EMG+ PGGG Sbjct: 1 MAMRSKSNLVLLLLAVAQISSFAPP--IHLKSHVSNK--SPFMMAAKKVSFGEESRKKLVEGINQVANAVRVTLGPKGRNVVLER-NYGAPEIVNDGVTIARDISLEDPEHNVGARLVQEVAQKSDNRAGDGTTTATVMTQAIVNNGLRSVTSGANPVELRRGIKIASEFLIKQIKELSKPVNGIKDLNSVATIASG-----SAVMGSIISQAFEKVGETGSTVVEESQTLTDEVDFTEGLTIER-GYLSPYFVGDKERQVCEMLKPKILVTDRKIDQVNELIPLLESMVKSKEPLFIVAEDVTGEALSALVVNKMRGVLDVCAIKAPSFGDRRKAYLQDIAIATGATYVAEEVGISLDQVTDDMLGTCARLVVSKEGTTIVTDGAQAEAVAKRIEAIRKEKSSTDNQFDQEKCDERIAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALEMGIVPGGG 454
BLAST of NO06G00840 vs. NCBI_GenBank
Match: CBJ29911.1 (chaperonin cpn60 [Ectocarpus siliculosus]) HSP 1 Score: 398.3 bits (1022), Expect = 3.600e-107 Identity = 215/439 (48.97%), Postives = 307/439 (69.93%), Query Frame = 0 Query: 43 PLASYATARRHG--SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480 P++S A R ++ M AK+V FG+ KL +GIN V DAVKVTLGP GRNVVL R P+IVNDG TIAR+I++ N E NVGV+L+QEVA+ SD RAGDGT+TS ++TQ IVNQG++ V SG NPV LR+GI+ A+ M++E I +A V EDL VAT+++ G M II F RV D G+T++E+ T DE+E + G+ +DR G+ S Y+++D ER +CE + P++LVT+ + +IP++E + + EPLL++AE+ +ALS LVVNK+RG ++V +V+AP G RRK +LQDIA+ATG+T++ ++G+ L + ++MLG A+ V +E TT+ + D+ + +K ++K+ + D+ +D++K R+AAL GG+A IKVGAATETELKDKKLRYEDALNSVR+A+E+G+ PGGG Sbjct: 57 PVSSLAGRRSRAGTALSMGAKSVVFGEDARKKLADGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIEVENHEENVGVKLVQEVAQKSDNRAGDGTTTSTLLTQEIVNQGMRLVTSGANPVELRQGILAASGMIIEEIKKLAVPVGKNEDLLNVATIAS-GSSTMGGIIAKAFERVG-DT---GSTVVEESQTLGDEVEFTEGLTIDR-GYLSPYFISDQERSLCEFKNPKILVTDKKIDQVNDLIPLLEAMVQAKEPLLIMAEDVVGEALSALVVNKMRGVLDVVAVKAPSFGERRKNYLQDIAIATGSTYVAEEVGLTLDQVKIEMLGTADRIVVMKEQTTIVSDGRNDEAVKARIKTIRKDAETSDSAFDKEKADERVAALGGGIARIKVGAATETELKDKKLRYEDALNSVRSALELGIVPGGG 488
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_001712532.1 (cpn60 [Hemiselmis andersenii] >ABW98207.1 cpn60 [Hemiselmis andersenii]) HSP 1 Score: 397.5 bits (1020), Expect = 6.200e-107 Identity = 203/425 (47.76%), Postives = 301/425 (70.82%), Query Frame = 0 Query: 55 SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480 +++MMAK V FG++ LV GIN V DAVK+TLGP GRNVVL R PQ++NDG TIAR+I+L NP N G RL+QEVA +D +AGDGT+TS ++TQ+IV QG+K V SG+NP++L++GI + LV+ I +A+ G+ED+ +AT++ GG++E+ +II + F +V + G+T +E+ + +DE++ + GM LDR G+ S Y+V DMER + EL PRV+VT+ + +++P++E + + EP+L+VAE+ +ALS LVVNK+RG ++VC++RAP G R+K +L+DIA+ TGAT++ ++G+ L +T + LG A V +E T+ +SE + + ++ +KK+++ D+ +D +K + RIA L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGG Sbjct: 61 NVKMMAKRVVFGEESRKSLVNGINAVADAVKITLGPKGRNVVLER-QMGSPQVINDGVTIARDIELENPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVTQGIKAVTSGVNPLALKRGIEKTSKFLVKEIKNLAKPCDGIEDIRNIATIAAGGNEEIGRIISTAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELINPRVVVTDKKITSVQELVPLLEMVVRLKEPVLIVAEDITSEALSTLVVNKMRGVLDVCAIRAPGFGERKKAYLEDIAILTGATYLAEEVGLTLDKVTNEQLGKANRVVVAKEACTIISSEANQEKVNARIEIIKKQIENTDSEFDIEKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGG 479
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_009038899.1 (hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens] >EGB06320.1 hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens]) HSP 1 Score: 396.0 bits (1016), Expect = 1.800e-106 Identity = 209/427 (48.95%), Postives = 299/427 (70.02%), Query Frame = 0 Query: 57 QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484 ++ AK V FGD +LV GIN V DAVKVTLGP GRNVVL R P+IVNDG TIAR+I+L +P +N+G +LIQEVA SD +AGDGT+TS ++TQ +VNQG+K V SG+NPV+LR+G+ AT+ L+ + +A+ V ++L +ATV+T G+ M II F +V D G+T +E+ T DE+E + G+ +DR G+ S Y+V D ER +CE+ P++LVT+ + + +IP++E KT E L+++AE+ +ALS LVVNK+RG ++V +++AP G RRK LQDIA+ATGAT++ ++G+ L T+T +MLG E V +E TT+ T D + + + +K E + D+++D++K + R+AAL GG+A IKVGAATETELKDKKLRYEDALN+V++A++MG+ PGGG LS Sbjct: 28 KLEAKKVLFGDASRAQLVAGINAVADAVKVTLGPKGRNVVLERA-YGAPEIVNDGVTIARDIELDDPAMNIGAKLIQEVASKSDSKAGDGTTTSTLLTQELVNQGMKAVSSGVNPVALRRGMSKATDALIVEVTALAKPVDSNDELLNIATVATSGNAVMGAIIAKAFEKVG-DT---GSTTMEESQTLTDEVEFTEGLTIDR-GYVSPYFVNDQERQLCEMLDPKILVTDQKIENVNDLIPLLEACVKTKERLVIIAEDVVGEALSALVVNKMRGVLDVVAIKAPGFGTRRKDLLQDIAIATGATYVAQEVGVALDTVTPEMLGTCERIVVGKEETTIITDGKQADAMEKRIAQIKLEAENTDSMFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDALNAVKSALKMGILPGGGSTLS 448
BLAST of NO06G00840 vs. NCBI_GenBank
Match: AFP65287.1 (60 kDa heat shock protein, CPN60 protein (nucleomorph) [Chroomonas mesostigmatica CCMP1168]) HSP 1 Score: 394.4 bits (1012), Expect = 5.200e-106 Identity = 201/423 (47.52%), Postives = 300/423 (70.92%), Query Frame = 0 Query: 57 QMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGG 480 QMMAK V F ++ LV GIN V +AVK+TLGP GRNVVL R PQ++NDG TIAR+I+L +P N G RL+QEVA +D +AGDGT+TS ++TQ+IVNQG+K V SG+NP++L++GI + +LV+ I +AR G+ED+ +AT++ GG++E+ +II + F +V + G+T +E+ + +DE++ + GM LDR G+ S Y+V DMER + EL PR++VT+ + +++P++E + ++ E LL+VAE+ +ALS LVVNK+RG ++VC++R+P G RRK +L+DIA+ TGAT+I ++G+ L +++D LG A V +E T+ + + + + ++ +KK+++ D+ +D +K + RIA L GG+A IKVGAATETELKDKKLRYEDA+NS + AIEMGV PGGG Sbjct: 66 QMMAKRVVFSEESRKSLVNGINAVANAVKITLGPKGRNVVLERT-LGSPQVINDGVTIARDIELEDPLENTGARLLQEVASKTDLKAGDGTTTSTVLTQSIVNQGIKAVASGVNPLALKRGIEKTSRLLVKEIKTLARPCNGIEDIRNIATIAAGGNEEIGRIIATAFEKVGEN----GSTTVEESQSLQDEVDFTEGMELDR-GYISPYFVKDMERQIAELIDPRIVVTDKKITSVQELVPLLEMVVRSKESLLIVAEDITGEALSTLVVNKMRGVLDVCAIRSPGFGERRKAYLEDIAILTGATYIAEEVGLTLDKISIDQLGKATRVVVAKEACTIISDKASQEKVNARIEQIKKQIENTDSDFDREKGEERIARLGGGIARIKVGAATETELKDKKLRYEDAINSTKAAIEMGVTPGGG 482
BLAST of NO06G00840 vs. NCBI_GenBank
Match: XP_003239906.1 (60 kDa heat shock protein, CPN60 protein [Cryptomonas paramecium] >AEA39008.1 60 kDa heat shock protein, CPN60 protein [Cryptomonas paramecium]) HSP 1 Score: 392.9 bits (1008), Expect = 1.500e-105 Identity = 201/429 (46.85%), Postives = 298/429 (69.46%), Query Frame = 0 Query: 59 MAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLSTWGK 488 MAK V FG++ LV GIN V DAVK+TLGP GRNVVL R + PQ++NDG TIAR+I+L NP N G RL+QEVA +D +AGDGT+TS ++TQAI+++G+K V SG+NP++L++GI LV+ I ++ G+ D+ +AT++ GG++E+ KII F +V + G+T +E+ + +DE++ + GM LDR G+ S Y++ D ER VCEL+ PR+LVT+ + ++IPI+E I K+ EPLL++A++ +ALS LVVNK+RG ++VC++++P G R+K +L+D+A+ TGAT++ + G+ L +T+D LG A + +E T+ + + D I ++ +K ++ D+ ++++K Q RIA L GGVA IK+GAATETELKDKKLRYEDA+NS + AIEMG+ PGGG L T K Sbjct: 48 MAKKVTFGEESRKLLVNGINTVADAVKITLGPKGRNVVLER-NFGIPQVINDGVTIARDIELENPMENTGARLLQEVATKTDLKAGDGTTTSTVLTQAIISKGIKAVASGINPLALKRGIEKTCRFLVKEIKDLSYPCNGINDIRNIATIAAGGNEEIGKIISMAFEKVGEN----GSTTVEESQSLQDEIDFTEGMELDR-GYISPYFIKDTERQVCELKNPRILVTDKKISSIQELIPILETIVKSKEPLLIIADDVTGEALSTLVVNKMRGIIDVCAIKSPGFGERKKYYLEDVAILTGATYVAEEAGLALNKITIDQLGKANRVIIAKEMCTIVSDFVNRDKIQARIRQIKNQILNNDSDFEKEKGQERIARLGGGVARIKIGAATETELKDKKLRYEDAINSTKAAIEMGITPGGGSTLLTLTK 470
BLAST of NO06G00840 vs. NCBI_GenBank
Match: OEU12386.1 (CPN60 protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 392.9 bits (1008), Expect = 1.500e-105 Identity = 217/440 (49.32%), Postives = 307/440 (69.77%), Query Frame = 0 Query: 46 SYATARRHG--SIQMMAKNVRFGDKGLDKLVEGINVVGDAVKVTLGPLGRNVVLSRVDEPYPQIVNDGATIAREIDLVNPEVNVGVRLIQEVAKTSDRRAGDGTSTSIIMTQAIVNQGLKYVKSGMNPVSLRKGIMGATNMLVERIPLVARKVTGVEDLEKVATVSTGGDKEMAKIIGSVFGRVDLDAKLGGATLLEDGNTSEDELEISSGMRLDRSGFESAYYVTDMERMVCELRKPRVLVTNYPLLHNYQMIPIMEEIAKTGEPLLVVAEETKDDALSLLVVNKLRGTVEVCSVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTMTMDMLGVAESAVTTREHTTLRTSEIFDDIIAEHVKNLKKELDGCDNVYDEQKLQYRIAALTGGVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVFPGGGQRLS 484 ++A +++ G ++ + AK V F + LV+GIN V DAVKVTLGP GRNVVL R + P+IVNDG TIAREI L +PE NVG +LIQEVA+ SD +AGDGT+TS IMTQAIVN G++ V SG+NPV+L +GI A N++ E+I A VTG+EDL+ VAT+++ G +M +II +V G+T++E+ T DE+E + G+ +DR G+ S Y+V D ER + EL PR+LVT+ + + ++P++E++ K+ +PLL++AE+ +ALS LVVNK+RG ++V +++AP G RR+++ QDIA+ATGA+F+ +LG+ L ++T+DMLG A+ V +E TT+ T I + L++E D D +D+ K RIA+L GG+A IKVGAATETELKDKKLRYEDALNSV +A E+GV PGGG L+ Sbjct: 20 AFAPSQKFGKSAVVLEAKKVSFREDSRRALVKGINQVADAVKVTLGPKGRNVVLER-NYGAPEIVNDGVTIAREIILRDPEENVGAKLIQEVAQKSDSKAGDGTTTSTIMTQAIVNNGMRAVTSGINPVALNRGIRKAGNLVSEKIKFHASPVTGIEDLKNVATIAS-GSVDMGRIIAQAADKVGET----GSTVVEESQTLFDEIEFTEGLTIDR-GYISPYFVKDQERQIGELVNPRILVTDAKIDNVNDVVPLLEQLVKSKDPLLIIAEDVTGEALSALVVNKMRGVLDVVAIKAPGFGNRRREYTQDIAIATGASFVAEELGITLDSVTLDMLGTADRIVVAKESTTIVTDGKHQKDIDARITQLRREADAADTDFDKDKFTERIASLGGGIARIKVGAATETELKDKKLRYEDALNSVDSARELGVVPGGGACLA 452 The following BLAST results are available for this feature:
BLAST of NO06G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00840 ID=NO06G00840|Name=NO06G00840|organism=Nannochloropsis oceanica|type=gene|length=2174bpback to top protein sequence of NO06G00840.1 >NO06G00840.1-protein ID=NO06G00840.1-protein|Name=NO06G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=510bpback to top Synonyms
Publications
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