Naga_100014g40, gene4401 (gene) Nannochloropsis gaditana

Overview
NameNaga_100014g40
Unique Namegene4401
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:920889..923166 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100014g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:920889..923166 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005829cytosol
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G00840NO06G00840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4562rna4562-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4562rna4562Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4562

>rna4562-protein ID=rna4562-protein|Name=rna4562|organism=Nannochloropsis gaditana|type=polypeptide|length=612bp
MTQTARRGTLPGGSVGTGTRTTMSIRPRSRQPLTLLLVLASCTLPSLAFL
YQGGIRLTPRTHSVRHSTLRMMAKNVKFGDKGLDKLVEGINVVGNAVKVT
LGPCGRNVVLSRADEPYPQIVNDGVTIAREIDLANEEVNVGVRLIQEVAK
KSDRRAGDGTTTSIIITQAIVNQGLKYVKSGMNPVSLRKGITGATEMLAQ
RIPTMARKVKGVEDLENIATVSTGGDRDMAKIIASVFGRVDLDAKLGGAT
LLEDGNTTEDELEVSSGMRLDRSGYDTAYFVTDTERMVCELRKPRVLVTN
YPLLHSYQLVPILEEVAKTGESLLIVSEETKDEALSLLVVNKLRGLVNVC
SVRAPFAGARRKQFLQDIALATGATFIDSDLGMMLQTATMEMLGVAETAT
TTREHTTLRTSEIFEDIIAEHVGNLKRELDACDNVYDEQKLQYRVAALSG
GVAVIKVGAATETELKDKKLRYEDALNSVRTAIEMGVLPGGGSALVYLGM
EMRDEILAAFPDKEERAGAEIVLKAIEEPVQQIARNAGMYPGRVLEQIKE
KREWGFGMNAATGKYENLLETGVLDSASVVLNALSNSASIASLVLTTQVV
VTEKTEGAINQM
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Synonyms
Publications